Gene annotation
Transcriptome id Sobic.001G217500.1,Sobic.001G217500.2,Sobic.001G217500.3
Synonym Sb01g019150
Functional annotation transporter-related, putative, expressed
UniProt A0A1B6QK77 , C5WYD7
Pfam PF03151
Panther DB PTHR11132 PTHR11132:SF76
NCBI CDD KOG1441; Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter
KEGG Orthology K15285; solute carrier family 35, member E3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28315 : Nucleotide/sugar transporter family protein
RAP-DB (Rice) LOC_Os10g33920.3,LOC_Os10g33920.2 : transporter-related, putative, expressed
MaizeGDB (Corn) Zm00025a021089 , Zm00025a006584
Brachypodium KQJ97121 , KQJ97122
Barley HORVU1Hr1G041720.5 , HORVU1Hr1G041720.6 , HORVU1Hr1G041720.1 , HORVU1Hr1G041720.3 , HORVU1Hr1G041720.2 , HORVU1Hr1G041720.4
Wheat TraesCS1B02G173400 , TraesCS1A02G156400 , TraesCS1D02G154900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G257000 transmembrane 9 superfamily member, putative, expressed -
2 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
3 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
4 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
5 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
6 Sobic.004G170400 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
7 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
8 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
9 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
10 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
11 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
12 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
13 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
14 Sobic.004G056400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
15 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
16 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
17 Sobic.002G136700 expressed protein -
18 Sobic.008G016700 expressed protein -
19 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
20 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta


Gene co-expression network
sample Sobic001G217500 Sobic001G217500 Sobic004G257000 Sobic004G257000 Sobic001G217500--Sobic004G257000 Sobic001G031900 Sobic001G031900 Sobic001G217500--Sobic001G031900 Sobic002G395000 Sobic002G395000 Sobic001G217500--Sobic002G395000 Sobic003G218400 Sobic003G218400 Sobic001G217500--Sobic003G218400 Sobic007G013900 Sobic007G013900 Sobic001G217500--Sobic007G013900 Sobic004G170400 Sobic004G170400 Sobic001G217500--Sobic004G170400 Sobic010G059300 Sobic010G059300 Sobic001G217500--Sobic010G059300 Sobic002G078300 Sobic002G078300 Sobic001G217500--Sobic002G078300 Sobic006G058900 Sobic006G058900 Sobic001G217500--Sobic006G058900 Sobic004G257000--Sobic001G217500 Sobic003G151600 Sobic003G151600 Sobic004G257000--Sobic003G151600 Sobic001G040100 Sobic001G040100 Sobic004G257000--Sobic001G040100 Sobic002G101300 Sobic002G101300 Sobic004G257000--Sobic002G101300 Sobic004G257000--Sobic001G031900 Sobic010G253300 Sobic010G253300 Sobic004G257000--Sobic010G253300 Sobic006G035900 Sobic006G035900 Sobic004G257000--Sobic006G035900 Sobic003G348800 Sobic003G348800 Sobic004G257000--Sobic003G348800 Sobic003G389000 Sobic003G389000 Sobic004G257000--Sobic003G389000 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic001G031900--Sobic002G395000 Sobic001G350600 Sobic001G350600 Sobic001G031900--Sobic001G350600 Sobic004G344800 Sobic004G344800 Sobic001G031900--Sobic004G344800 Sobic003G152900 Sobic003G152900 Sobic001G031900--Sobic003G152900 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic004G030000 Sobic004G030000 Sobic001G031900--Sobic004G030000 Sobic004G260200 Sobic004G260200 Sobic002G395000--Sobic004G260200 Sobic003G135600 Sobic003G135600 Sobic002G395000--Sobic003G135600 Sobic009G224400 Sobic009G224400 Sobic002G395000--Sobic009G224400 Sobic003G238500 Sobic003G238500 Sobic002G395000--Sobic003G238500 Sobic002G309700 Sobic002G309700 Sobic002G395000--Sobic002G309700 Sobic001G073600 Sobic001G073600 Sobic002G395000--Sobic001G073600 Sobic004G155100 Sobic004G155100 Sobic002G395000--Sobic004G155100 Sobic007G023400 Sobic007G023400 Sobic002G395000--Sobic007G023400 Sobic002G395000--Sobic002G078300 Sobic001G047800 Sobic001G047800 Sobic003G218400--Sobic001G047800 Sobic003G218400--Sobic004G260200 Sobic003G218400--Sobic002G309700 Sobic002G418400 Sobic002G418400 Sobic003G218400--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic003G218400--Sobic003G215700 Sobic001G404800 Sobic001G404800 Sobic003G218400--Sobic001G404800 Sobic003G218400--Sobic007G013900 Sobic003G218400--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic003G218400--Sobic001G074700 Sobic009G215300 Sobic009G215300 Sobic007G013900--Sobic009G215300 Sobic004G159000 Sobic004G159000 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic001G031800 Sobic001G031800 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic007G013900--Sobic002G395000 Sobic008G136800 Sobic008G136800 Sobic007G013900--Sobic008G136800 Sobic004G170400--Sobic001G350600 Sobic004G259200 Sobic004G259200 Sobic004G170400--Sobic004G259200 Sobic004G170400--Sobic001G074700 Sobic001G465800 Sobic001G465800 Sobic004G170400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic004G170400--Sobic009G119900 Sobic002G356400 Sobic002G356400 Sobic004G170400--Sobic002G356400 Sobic003G209000 Sobic003G209000 Sobic004G170400--Sobic003G209000 Sobic004G310300 Sobic004G310300 Sobic004G170400--Sobic004G310300 Sobic004G170400--Sobic002G418400 Sobic004G060500 Sobic004G060500 Sobic010G059300--Sobic004G060500 Sobic001G519000 Sobic001G519000 Sobic010G059300--Sobic001G519000 Sobic004G183200 Sobic004G183200 Sobic010G059300--Sobic004G183200 Sobic010G059300--Sobic001G047800 Sobic010G264300 Sobic010G264300 Sobic010G059300--Sobic010G264300 Sobic010G059300--Sobic003G218400 Sobic001G095632 Sobic001G095632 Sobic010G059300--Sobic001G095632 Sobic010G059300--Sobic002G418400 Sobic003G296800 Sobic003G296800 Sobic010G059300--Sobic003G296800 Sobic001G286200 Sobic001G286200 Sobic002G078300--Sobic001G286200 Sobic002G078300--Sobic010G264300 Sobic002G078300--Sobic004G260200 Sobic002G078300--Sobic002G395000 Sobic002G078300--Sobic002G309700 Sobic007G211500 Sobic007G211500 Sobic002G078300--Sobic007G211500 Sobic002G078300--Sobic002G356400 Sobic001G370700 Sobic001G370700 Sobic002G078300--Sobic001G370700 Sobic002G308300 Sobic002G308300 Sobic002G078300--Sobic002G308300 Sobic006G058900--Sobic001G031900 Sobic006G058900--Sobic001G458800 Sobic006G058900--Sobic004G202100 Sobic006G058900--Sobic002G395000 Sobic007G171500 Sobic007G171500 Sobic006G058900--Sobic007G171500 Sobic002G309500 Sobic002G309500 Sobic006G058900--Sobic002G309500 Sobic006G058900--Sobic004G344800 Sobic003G034900 Sobic003G034900 Sobic006G058900--Sobic003G034900 Sobic003G185500 Sobic003G185500 Sobic006G058900--Sobic003G185500
Octagon: transcription factors


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