Gene annotation
Transcriptome id Sobic.008G016700.1
Synonym Sb08g001460
Functional annotation expressed protein
UniProt C5YQM7
Pfam PF13233
Panther DB PTHR35763 PTHR35763:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51960 : -
RAP-DB (Rice) LOC_Os11g03920.1 : expressed protein
MaizeGDB (Corn) Zm00025a019500
Brachypodium KQJ92432
Barley HORVU5Hr1G044970.3 , HORVU5Hr1G044970.2 , HORVU5Hr1G044970.1 , HORVU5Hr1G044970.6 , HORVU5Hr1G044970.5 , HORVU5Hr1G044970.4
Wheat TraesCS5B02G136800 , TraesCS5D02G152900 , TraesCS5A02G139200
Populus -


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cDNA sequences
Sobic.008G016700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
2 Sobic.010G089500 annexin, putative, expressed -
3 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
4 Sobic.002G136700 expressed protein -
5 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
6 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
7 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
8 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
9 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
10 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
11 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
12 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
13 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
14 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
15 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
16 Sobic.001G197000 dehydration response related protein, putative, expressed -
17 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
18 Sobic.002G296200 expressed protein -
19 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
20 Sobic.002G342000 protein phosphatase 2C, putative, expressed -


Gene co-expression network
sample Sobic008G016700 Sobic008G016700 Sobic003G218400 Sobic003G218400 Sobic008G016700--Sobic003G218400 Sobic010G089500 Sobic010G089500 Sobic008G016700--Sobic010G089500 Sobic004G260200 Sobic004G260200 Sobic008G016700--Sobic004G260200 Sobic002G136700 Sobic002G136700 Sobic008G016700--Sobic002G136700 Sobic001G342200 Sobic001G342200 Sobic008G016700--Sobic001G342200 Sobic006G124300 Sobic006G124300 Sobic008G016700--Sobic006G124300 Sobic007G013900 Sobic007G013900 Sobic008G016700--Sobic007G013900 Sobic004G030000 Sobic004G030000 Sobic008G016700--Sobic004G030000 Sobic001G047800 Sobic001G047800 Sobic008G016700--Sobic001G047800 Sobic003G218400--Sobic001G047800 Sobic003G218400--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic003G218400--Sobic002G309700 Sobic002G418400 Sobic002G418400 Sobic003G218400--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic003G218400--Sobic003G215700 Sobic001G404800 Sobic001G404800 Sobic003G218400--Sobic001G404800 Sobic003G218400--Sobic007G013900 Sobic004G170400 Sobic004G170400 Sobic003G218400--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic003G218400--Sobic001G074700 Sobic010G101600 Sobic010G101600 Sobic010G089500--Sobic010G101600 Sobic003G096000 Sobic003G096000 Sobic010G089500--Sobic003G096000 Sobic004G056400 Sobic004G056400 Sobic010G089500--Sobic004G056400 Sobic002G186900 Sobic002G186900 Sobic010G089500--Sobic002G186900 Sobic002G395000 Sobic002G395000 Sobic010G089500--Sobic002G395000 Sobic001G501600 Sobic001G501600 Sobic010G089500--Sobic001G501600 Sobic009G111400 Sobic009G111400 Sobic010G089500--Sobic009G111400 Sobic003G289601 Sobic003G289601 Sobic010G089500--Sobic003G289601 Sobic001G370700 Sobic001G370700 Sobic010G089500--Sobic001G370700 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic001G465800 Sobic001G465800 Sobic004G260200--Sobic001G465800 Sobic004G260200--Sobic002G395000 Sobic002G356400 Sobic002G356400 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic004G260200--Sobic009G215300 Sobic002G263100 Sobic002G263100 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700 Sobic004G228700 Sobic004G228700 Sobic002G136700--Sobic004G228700 Sobic002G136700--Sobic003G215700 Sobic002G136700--Sobic002G418400 Sobic010G028200 Sobic010G028200 Sobic002G136700--Sobic010G028200 Sobic003G209000 Sobic003G209000 Sobic002G136700--Sobic003G209000 Sobic002G136700--Sobic003G218400 Sobic002G136700--Sobic001G047800 Sobic001G533500 Sobic001G533500 Sobic002G136700--Sobic001G533500 Sobic002G135200 Sobic002G135200 Sobic002G136700--Sobic002G135200 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G060300 Sobic001G060300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic001G342200--Sobic004G170400 Sobic001G342200--Sobic001G074700 Sobic001G031900 Sobic001G031900 Sobic001G342200--Sobic001G031900 Sobic009G211900 Sobic009G211900 Sobic006G124300--Sobic009G211900 Sobic006G203900 Sobic006G203900 Sobic006G124300--Sobic006G203900 Sobic008G136800 Sobic008G136800 Sobic006G124300--Sobic008G136800 Sobic006G124300--Sobic004G260200 Sobic005G091700 Sobic005G091700 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic003G135600 Sobic003G135600 Sobic006G124300--Sobic003G135600 Sobic003G074900 Sobic003G074900 Sobic006G124300--Sobic003G074900 Sobic001G350600 Sobic001G350600 Sobic006G124300--Sobic001G350600 Sobic007G013900--Sobic009G215300 Sobic004G159000 Sobic004G159000 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic001G031800 Sobic001G031800 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic007G013900--Sobic002G395000 Sobic007G013900--Sobic008G136800 Sobic003G152900 Sobic003G152900 Sobic004G030000--Sobic003G152900 Sobic004G030000--Sobic001G350600 Sobic004G030000--Sobic001G465800 Sobic004G030000--Sobic002G309700 Sobic004G030000--Sobic001G074700 Sobic004G030000--Sobic004G170400 Sobic010G007400 Sobic010G007400 Sobic004G030000--Sobic010G007400 Sobic004G344800 Sobic004G344800 Sobic004G030000--Sobic004G344800 Sobic004G030000--Sobic004G159000 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G519000 Sobic001G519000 Sobic001G047800--Sobic001G519000
Octagon: transcription factors


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