Gene annotation
Transcriptome id Sobic.002G342000.1
Synonym Sb02g036610
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5XBN0
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF193
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT4G03415 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os07g37890.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a014938 , Zm00025a048415
Brachypodium KQK15690 , KQK15691
Barley HORVU2Hr1G039710.4 , HORVU2Hr1G039710.5 , HORVU2Hr1G039710.1 , HORVU2Hr1G039710.2 , HORVU2Hr1G039710.3 , HORVU2Hr1G084080.1
Wheat TraesCS2D02G214200 , TraesCS2B02G229000 , TraesCS2A02G201900
Populus PNT31485


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cDNA sequences
Sobic.002G342000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
2 Sobic.001G342200 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
3 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
4 Sobic.001G031900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
5 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
6 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
7 Sobic.003G152900 -(PubMedID : 26976818)@dihydrolipoyl dehydrogenase 1, mitochondrial precursor, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
8 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
9 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
10 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
11 Sobic.003G141700 50S ribosomal protein L15, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15
12 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
13 Sobic.004G056400 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
14 Sobic.001G060300 expressed protein -
15 Sobic.007G023400 succinate dehydrogenase iron-sulfur subunit 2,mitochondrial precursor, putative, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
16 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
17 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
18 Sobic.003G116600 syntaxin, putative, expressed K08488: syntaxin 7
19 Sobic.004G339300 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
20 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1


Gene co-expression network
sample Sobic002G342000 Sobic002G342000 Sobic010G007400 Sobic010G007400 Sobic002G342000--Sobic010G007400 Sobic001G342200 Sobic001G342200 Sobic002G342000--Sobic001G342200 Sobic004G030000 Sobic004G030000 Sobic002G342000--Sobic004G030000 Sobic001G031900 Sobic001G031900 Sobic002G342000--Sobic001G031900 Sobic003G218400 Sobic003G218400 Sobic002G342000--Sobic003G218400 Sobic007G013900 Sobic007G013900 Sobic002G342000--Sobic007G013900 Sobic003G152900 Sobic003G152900 Sobic002G342000--Sobic003G152900 Sobic002G309700 Sobic002G309700 Sobic002G342000--Sobic002G309700 Sobic001G031800 Sobic001G031800 Sobic002G342000--Sobic001G031800 Sobic010G007400--Sobic004G030000 Sobic002G090700 Sobic002G090700 Sobic010G007400--Sobic002G090700 Sobic003G116600 Sobic003G116600 Sobic010G007400--Sobic003G116600 Sobic002G401700 Sobic002G401700 Sobic010G007400--Sobic002G401700 Sobic004G159000 Sobic004G159000 Sobic010G007400--Sobic004G159000 Sobic010G007400--Sobic001G031900 Sobic010G007400--Sobic007G013900 Sobic010G007400--Sobic003G152900 Sobic001G074700 Sobic001G074700 Sobic010G007400--Sobic001G074700 Sobic001G057300 Sobic001G057300 Sobic001G342200--Sobic001G057300 Sobic001G060300 Sobic001G060300 Sobic001G342200--Sobic001G060300 Sobic007G177200 Sobic007G177200 Sobic001G342200--Sobic007G177200 Sobic007G115100 Sobic007G115100 Sobic001G342200--Sobic007G115100 Sobic007G092100 Sobic007G092100 Sobic001G342200--Sobic007G092100 Sobic010G008800 Sobic010G008800 Sobic001G342200--Sobic010G008800 Sobic004G170400 Sobic004G170400 Sobic001G342200--Sobic004G170400 Sobic001G342200--Sobic001G074700 Sobic001G342200--Sobic001G031900 Sobic004G030000--Sobic003G152900 Sobic001G350600 Sobic001G350600 Sobic004G030000--Sobic001G350600 Sobic001G465800 Sobic001G465800 Sobic004G030000--Sobic001G465800 Sobic004G030000--Sobic002G309700 Sobic004G030000--Sobic001G074700 Sobic004G030000--Sobic004G170400 Sobic004G030000--Sobic010G007400 Sobic004G344800 Sobic004G344800 Sobic004G030000--Sobic004G344800 Sobic004G030000--Sobic004G159000 Sobic006G058900 Sobic006G058900 Sobic001G031900--Sobic006G058900 Sobic004G202100 Sobic004G202100 Sobic001G031900--Sobic004G202100 Sobic002G395000 Sobic002G395000 Sobic001G031900--Sobic002G395000 Sobic001G031900--Sobic001G350600 Sobic001G031900--Sobic004G344800 Sobic001G031900--Sobic003G152900 Sobic001G031900--Sobic004G170400 Sobic001G458800 Sobic001G458800 Sobic001G031900--Sobic001G458800 Sobic001G031900--Sobic004G030000 Sobic001G047800 Sobic001G047800 Sobic003G218400--Sobic001G047800 Sobic004G260200 Sobic004G260200 Sobic003G218400--Sobic004G260200 Sobic003G218400--Sobic002G309700 Sobic002G418400 Sobic002G418400 Sobic003G218400--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic003G218400--Sobic003G215700 Sobic001G404800 Sobic001G404800 Sobic003G218400--Sobic001G404800 Sobic003G218400--Sobic007G013900 Sobic003G218400--Sobic004G170400 Sobic003G218400--Sobic001G074700 Sobic009G215300 Sobic009G215300 Sobic007G013900--Sobic009G215300 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic007G013900--Sobic002G395000 Sobic008G136800 Sobic008G136800 Sobic007G013900--Sobic008G136800 Sobic003G152900--Sobic004G030000 Sobic003G152900--Sobic001G074700 Sobic003G152900--Sobic004G170400 Sobic003G152900--Sobic001G350600 Sobic010G154700 Sobic010G154700 Sobic003G152900--Sobic010G154700 Sobic003G152900--Sobic001G031900 Sobic003G152900--Sobic002G090700 Sobic003G152900--Sobic004G159000 Sobic004G066800 Sobic004G066800 Sobic003G152900--Sobic004G066800 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic001G134200 Sobic001G134200 Sobic001G031800--Sobic001G134200 Sobic002G263100 Sobic002G263100 Sobic001G031800--Sobic002G263100 Sobic003G296800 Sobic003G296800 Sobic001G031800--Sobic003G296800 Sobic001G031800--Sobic004G260200 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic002G246800 Sobic002G246800 Sobic001G031800--Sobic002G246800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001
Octagon: transcription factors


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