Gene annotation
Transcriptome id Sobic.005G130550.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIG1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G116100 expressed protein -
2 Sobic.005G051600 plant protein of unknown function domain containing protein, expressed -
3 Sobic.005G130700 expressed protein -
4 Sobic.004G297950 - -
5 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -
6 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
8 Sobic.005G130600 expressed protein -
9 Sobic.008G114000 expressed protein -
10 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
11 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
12 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
13 Sobic.004G266500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
14 Sobic.001G264400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
15 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
16 Sobic.006G245600 protein kinase domain containing protein, expressed -
17 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -
18 Sobic.008G158000 expressed protein -
19 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
20 Sobic.008G043100 harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic005G130550 Sobic005G130550 Sobic010G116100 Sobic010G116100 Sobic005G130550--Sobic010G116100 Sobic005G051600 Sobic005G051600 Sobic005G130550--Sobic005G051600 Sobic005G130700 Sobic005G130700 Sobic005G130550--Sobic005G130700 Sobic004G297950 Sobic004G297950 Sobic005G130550--Sobic004G297950 Sobic006G062300 Sobic006G062300 Sobic005G130550--Sobic006G062300 Sobic005G110600 Sobic005G110600 Sobic005G130550--Sobic005G110600 Sobic007G012800 Sobic007G012800 Sobic005G130550--Sobic007G012800 Sobic005G130600 Sobic005G130600 Sobic005G130550--Sobic005G130600 Sobic008G114000 Sobic008G114000 Sobic005G130550--Sobic008G114000 Sobic010G116100--Sobic005G130700 Sobic010G116100--Sobic006G062300 Sobic010G116100--Sobic005G130550 Sobic010G116100--Sobic007G012800 Sobic010G116100--Sobic005G110600 Sobic003G419600 Sobic003G419600 Sobic010G116100--Sobic003G419600 Sobic010G116100--Sobic004G297950 Sobic003G277200 Sobic003G277200 Sobic010G116100--Sobic003G277200 Sobic009G134000 Sobic009G134000 Sobic010G116100--Sobic009G134000 Sobic005G051600--Sobic005G130550 Sobic005G142500 Sobic005G142500 Sobic005G051600--Sobic005G142500 Sobic001G264400 Sobic001G264400 Sobic005G051600--Sobic001G264400 Sobic005G051600--Sobic004G297950 Sobic003G427700 Sobic003G427700 Sobic005G051600--Sobic003G427700 Sobic005G051600--Sobic005G130600 Sobic007G021000 Sobic007G021000 Sobic005G051600--Sobic007G021000 Sobic003G321400 Sobic003G321400 Sobic005G051600--Sobic003G321400 Sobic004G170900 Sobic004G170900 Sobic005G051600--Sobic004G170900 Sobic005G130700--Sobic005G110600 Sobic005G130700--Sobic006G062300 Sobic005G130700--Sobic010G116100 Sobic005G130700--Sobic003G419600 Sobic001G140800 Sobic001G140800 Sobic005G130700--Sobic001G140800 Sobic005G130700--Sobic003G277200 Sobic005G130700--Sobic009G134000 Sobic006G245600 Sobic006G245600 Sobic005G130700--Sobic006G245600 Sobic003G272900 Sobic003G272900 Sobic005G130700--Sobic003G272900 Sobic003G269100 Sobic003G269100 Sobic004G297950--Sobic003G269100 Sobic004G297950--Sobic005G130600 Sobic004G297950--Sobic003G321400 Sobic004G297950--Sobic005G110600 Sobic005G047100 Sobic005G047100 Sobic004G297950--Sobic005G047100 Sobic001G099600 Sobic001G099600 Sobic004G297950--Sobic001G099600 Sobic004G297950--Sobic001G264400 Sobic005G052500 Sobic005G052500 Sobic004G297950--Sobic005G052500 Sobic001G484000 Sobic001G484000 Sobic004G297950--Sobic001G484000 Sobic006G062300--Sobic005G130700 Sobic006G062300--Sobic005G110600 Sobic006G062300--Sobic010G116100 Sobic006G062300--Sobic003G419600 Sobic010G007000 Sobic010G007000 Sobic006G062300--Sobic010G007000 Sobic006G062300--Sobic001G140800 Sobic008G170400 Sobic008G170400 Sobic006G062300--Sobic008G170400 Sobic006G062300--Sobic004G297950 Sobic007G202100 Sobic007G202100 Sobic006G062300--Sobic007G202100 Sobic005G110600--Sobic005G130700 Sobic005G110600--Sobic006G062300 Sobic005G110600--Sobic004G297950 Sobic005G110600--Sobic001G140800 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic005G110600--Sobic010G007000 Sobic005G110600--Sobic003G269100 Sobic005G110600--Sobic001G484000 Sobic005G209900 Sobic005G209900 Sobic007G012800--Sobic005G209900 Sobic001G488400 Sobic001G488400 Sobic007G012800--Sobic001G488400 Sobic009G154100 Sobic009G154100 Sobic007G012800--Sobic009G154100 Sobic007G012800--Sobic009G134000 Sobic005G188500 Sobic005G188500 Sobic007G012800--Sobic005G188500 Sobic010G107200 Sobic010G107200 Sobic007G012800--Sobic010G107200 Sobic007G103800 Sobic007G103800 Sobic007G012800--Sobic007G103800 Sobic006G032800 Sobic006G032800 Sobic007G012800--Sobic006G032800 Sobic007G012800--Sobic003G277200 Sobic005G130600--Sobic004G297950 Sobic005G130600--Sobic003G321400 Sobic005G130600--Sobic003G269100 Sobic005G130600--Sobic005G110600 Sobic005G130600--Sobic001G140800 Sobic003G115200 Sobic003G115200 Sobic005G130600--Sobic003G115200 Sobic006G096500 Sobic006G096500 Sobic005G130600--Sobic006G096500 Sobic001G046800 Sobic001G046800 Sobic005G130600--Sobic001G046800 Sobic005G130600--Sobic001G099600 Sobic002G016400 Sobic002G016400 Sobic008G114000--Sobic002G016400 Sobic008G114000--Sobic001G264400 Sobic008G113900 Sobic008G113900 Sobic008G114000--Sobic008G113900 Sobic007G208100 Sobic007G208100 Sobic008G114000--Sobic007G208100 Sobic008G114000--Sobic003G269100 Sobic008G114000--Sobic004G297950 Sobic001G382700 Sobic001G382700 Sobic008G114000--Sobic001G382700 Sobic008G114000--Sobic001G099600 Sobic009G061400 Sobic009G061400 Sobic008G114000--Sobic009G061400
Octagon: transcription factors


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