Gene annotation
Transcriptome id Sobic.002G312700.1,Sobic.002G312700.2
Synonym Sb02g034220
Functional annotation myosin heavy chain-related, putative, expressed
UniProt C5X9C6
Pfam PF05911
Panther DB PTHR31580 PTHR31580:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05270 : Plant protein of unknown function (DUF869)
RAP-DB (Rice) LOC_Os07g32340.1,LOC_Os07g32340.2 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a048169 , Zm00025a014743
Brachypodium KQK16094 , KQK16093 , KQK16092
Barley -
Wheat TraesCS2B02G250400 , TraesCS2B02G250400 , TraesCS2D02G232600 , TraesCS2D02G232600 , TraesCS2D02G232600 , TraesCS2A02G232900 , TraesCS2A02G232900 , TraesCS2A02G232900
Populus -


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cDNA sequences
Sobic.002G312700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G172500 zinc finger family protein, putative, expressed -
2 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
3 Sobic.006G109500 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
4 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
5 Sobic.010G090500 expressed protein -
6 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
7 Sobic.007G106500 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
8 Sobic.004G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
9 Sobic.008G097500 expressed protein -
10 Sobic.003G132500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@subtilisin-like protease, putative, expressed -
11 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
12 Sobic.001G460400 expressed protein -
13 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
14 Sobic.001G131001 - -
15 Sobic.009G246100 X8 domain containing protein, expressed -
16 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
17 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
18 Sobic.001G133900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
20 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G312700 Sobic002G312700 Sobic007G172500 Sobic007G172500 Sobic002G312700--Sobic007G172500 Sobic003G198500 Sobic003G198500 Sobic002G312700--Sobic003G198500 Sobic006G109500 Sobic006G109500 Sobic002G312700--Sobic006G109500 Sobic005G022500 Sobic005G022500 Sobic002G312700--Sobic005G022500 Sobic010G090500 Sobic010G090500 Sobic002G312700--Sobic010G090500 Sobic009G079100 Sobic009G079100 Sobic002G312700--Sobic009G079100 Sobic007G106500 Sobic007G106500 Sobic002G312700--Sobic007G106500 Sobic004G161200 Sobic004G161200 Sobic002G312700--Sobic004G161200 Sobic008G097500 Sobic008G097500 Sobic002G312700--Sobic008G097500 Sobic001G238500 Sobic001G238500 Sobic007G172500--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic007G172500--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic007G172500--Sobic006G009700 Sobic004G312500 Sobic004G312500 Sobic007G172500--Sobic004G312500 Sobic005G104200 Sobic005G104200 Sobic007G172500--Sobic005G104200 Sobic006G108300 Sobic006G108300 Sobic007G172500--Sobic006G108300 Sobic007G020700 Sobic007G020700 Sobic007G172500--Sobic007G020700 Sobic007G172500--Sobic005G022500 Sobic002G411000 Sobic002G411000 Sobic007G172500--Sobic002G411000 Sobic003G198500--Sobic009G079100 Sobic003G198500--Sobic010G090500 Sobic001G073150 Sobic001G073150 Sobic003G198500--Sobic001G073150 Sobic003G366300 Sobic003G366300 Sobic003G198500--Sobic003G366300 Sobic003G198500--Sobic002G312700 Sobic004G051300 Sobic004G051300 Sobic003G198500--Sobic004G051300 Sobic009G246700 Sobic009G246700 Sobic003G198500--Sobic009G246700 Sobic010G022400 Sobic010G022400 Sobic003G198500--Sobic010G022400 Sobic008G174800 Sobic008G174800 Sobic003G198500--Sobic008G174800 Sobic006G109500--Sobic002G312700 Sobic002G271300 Sobic002G271300 Sobic006G109500--Sobic002G271300 Sobic003G161500 Sobic003G161500 Sobic006G109500--Sobic003G161500 Sobic006G109500--Sobic007G172500 Sobic006G109500--Sobic010G090500 Sobic006G109500--Sobic009G079100 Sobic009G073400 Sobic009G073400 Sobic006G109500--Sobic009G073400 Sobic008G043500 Sobic008G043500 Sobic006G109500--Sobic008G043500 Sobic003G132500 Sobic003G132500 Sobic006G109500--Sobic003G132500 Sobic001G506600 Sobic001G506600 Sobic005G022500--Sobic001G506600 Sobic005G219700 Sobic005G219700 Sobic005G022500--Sobic005G219700 Sobic001G002800 Sobic001G002800 Sobic005G022500--Sobic001G002800 Sobic001G503000 Sobic001G503000 Sobic005G022500--Sobic001G503000 Sobic005G022500--Sobic007G020700 Sobic001G163800 Sobic001G163800 Sobic005G022500--Sobic001G163800 Sobic008G133000 Sobic008G133000 Sobic005G022500--Sobic008G133000 Sobic005G022500--Sobic007G172500 Sobic002G376100 Sobic002G376100 Sobic005G022500--Sobic002G376100 Sobic001G159800 Sobic001G159800 Sobic010G090500--Sobic001G159800 Sobic010G120300 Sobic010G120300 Sobic010G090500--Sobic010G120300 Sobic009G206500 Sobic009G206500 Sobic010G090500--Sobic009G206500 Sobic010G090500--Sobic009G079100 Sobic001G437500 Sobic001G437500 Sobic010G090500--Sobic001G437500 Sobic006G267500 Sobic006G267500 Sobic010G090500--Sobic006G267500 Sobic010G090500--Sobic001G073150 Sobic009G061000 Sobic009G061000 Sobic010G090500--Sobic009G061000 Sobic009G125900 Sobic009G125900 Sobic010G090500--Sobic009G125900 Sobic009G079100--Sobic010G090500 Sobic009G079100--Sobic003G198500 Sobic009G026101 Sobic009G026101 Sobic009G079100--Sobic009G026101 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G079100--Sobic009G246700 Sobic009G079100--Sobic009G206500 Sobic007G038600 Sobic007G038600 Sobic007G106500--Sobic007G038600 Sobic001G173700 Sobic001G173700 Sobic007G106500--Sobic001G173700 Sobic007G106500--Sobic001G238500 Sobic007G106500--Sobic004G126500 Sobic001G131001 Sobic001G131001 Sobic007G106500--Sobic001G131001 Sobic007G106500--Sobic005G104200 Sobic007G106500--Sobic007G172500 Sobic007G106500--Sobic007G020700 Sobic001G464300 Sobic001G464300 Sobic007G106500--Sobic001G464300 Sobic004G161200--Sobic007G038600 Sobic004G156250 Sobic004G156250 Sobic004G161200--Sobic004G156250 Sobic002G238300 Sobic002G238300 Sobic004G161200--Sobic002G238300 Sobic004G108800 Sobic004G108800 Sobic004G161200--Sobic004G108800 Sobic007G038500 Sobic007G038500 Sobic004G161200--Sobic007G038500 Sobic004G161200--Sobic001G131001 Sobic009G015166 Sobic009G015166 Sobic004G161200--Sobic009G015166 Sobic007G156800 Sobic007G156800 Sobic004G161200--Sobic007G156800 Sobic004G161200--Sobic007G106500 Sobic008G097500--Sobic010G022400 Sobic004G034200 Sobic004G034200 Sobic008G097500--Sobic004G034200 Sobic003G134900 Sobic003G134900 Sobic008G097500--Sobic003G134900 Sobic001G316000 Sobic001G316000 Sobic008G097500--Sobic001G316000 Sobic008G097500--Sobic002G312700 Sobic003G056000 Sobic003G056000 Sobic008G097500--Sobic003G056000 Sobic003G286800 Sobic003G286800 Sobic008G097500--Sobic003G286800 Sobic008G097500--Sobic003G198500 Sobic001G336700 Sobic001G336700 Sobic008G097500--Sobic001G336700
Octagon: transcription factors


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