Gene annotation
| Transcriptome id | Sobic.003G132500.3,Sobic.003G132500.2,Sobic.003G132500.1 |
|---|---|
| Synonym | Sb03g011300, ATSBT5.2 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543) subtilisin-like protease, putative, expressed |
| UniProt | C5XHB2 , A0A1W0VX75 |
| Pfam | PF05922 PF00082 |
| Panther DB | PTHR10795 PTHR10795:SF444 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0006508; proteolysis GO:0004252serine-type endopeptidase activity |
Orthologs (automatic annotation)
| TAIR | AT1G20160 : Subtilisin-like serine endopeptidase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os09g30458.1 : subtilisin-like protease, putative, expressed |
| MaizeGDB (Corn) | Zm00025a024154 , Zm00025a051594 |
| Brachypodium | KQK03932 |
| Barley | HORVU3Hr1G039800.20 , HORVU3Hr1G039800.21 , HORVU3Hr1G039800.22 , HORVU3Hr1G039800.11 , HORVU3Hr1G039800.10 , HORVU3Hr1G039800.13 , HORVU3Hr1G039800.12 , HORVU3Hr1G039800.15 , HORVU3Hr1G039800.14 , HORVU3Hr1G039800.17 , HORVU3Hr1G039800.16 , HORVU3Hr1G039800.19 , HORVU3Hr1G039800.18 , HORVU3Hr1G039800.5 , HORVU3Hr1G039800.4 , HORVU3Hr1G039800.7 , HORVU3Hr1G039800.6 , HORVU3Hr1G039800.1 , HORVU3Hr1G039800.3 , HORVU3Hr1G039800.2 , HORVU3Hr1G039800.9 , HORVU3Hr1G039800.8 |
| Wheat | TraesCS3A02G191500 , TraesCS3A02G191500 , TraesCS3B02G219500 , TraesCS3B02G219500 , TraesCS3B02G219500 , TraesCS3D02G194100 , TraesCS7A02G037500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G149300 | possible lysine decarboxylase domain containing protein, expressed | K06966: pyrimidine/purine-5'-nucleotide nucleosidase |
| 2 | Sobic.002G016400 | monocopper oxidase, putative, expressed | - |
| 3 | Sobic.005G231300 | thaumatin, putative, expressed | - |
| 4 | Sobic.002G034301 | - | - |
| 5 | Sobic.003G052100 | receptor-like protein kinase 2 precursor, putative, expressed | - |
| 6 | Sobic.010G042600 | transporter family protein, putative, expressed | K15280: solute carrier family 35, member C2 |
| 7 | Sobic.007G208100 | heavy metal-associated domain containing protein, expressed | - |
| 8 | Sobic.007G120301 | - | - |
| 9 | Sobic.001G144200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed | - |
| 10 | Sobic.004G286700 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 11 | Sobic.010G104400 | cysteine-rich repeat secretory protein precursor, putative, expressed | - |
| 12 | Sobic.001G402400 | expressed protein | - |
| 13 | Sobic.003G410600 | exostosin family domain containing protein, expressed | - |
| 14 | Sobic.001G305300 | ATROPGEF7/ROPGEF7, putative, expressed | - |
| 15 | Sobic.002G275500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 16 | Sobic.003G083600 | DNA binding protein, putative, expressed | - |
| 17 | Sobic.003G296500 | leucine rich repeat family protein, putative, expressed | - |
| 18 | Sobic.009G206500 | respiratory burst oxidase, putative, expressed | K13447: respiratory burst oxidase |
| 19 | Sobic.002G308200 | leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed | - |
| 20 | Sobic.008G077300 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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