Gene annotation
Transcriptome id Sobic.002G308200.1
Synonym Sb02g033810, GSO1
Functional annotation leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed
UniProt C5X969
Pfam PF08263 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF140
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT4G20140 : Leucine-rich repeat transmembrane protein kinase
RAP-DB (Rice) LOC_Os07g31500.1 : leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020124 , Zm00025a018228 , Zm00025a051047 , Zm00025a048104 , Zm00025a042309 , Zm00025a014704
Brachypodium KQK17286 , KQK16122 , PNT75045 , KQJ94124
Barley HORVU2Hr1G049630.1 , HORVU2Hr1G049630.2 , HORVU4Hr1G088650.7 , HORVU4Hr1G088650.6 , HORVU4Hr1G088650.5 , HORVU4Hr1G088650.4 , HORVU4Hr1G088650.3 , HORVU4Hr1G088650.9 , HORVU4Hr1G088650.8 , HORVU4Hr1G088650.40 , HORVU4Hr1G088650.43 , HORVU4Hr1G088650.46 , HORVU4Hr1G088650.47 , HORVU4Hr1G088650.45 , HORVU4Hr1G088650.48 , HORVU4Hr1G088650.31 , HORVU4Hr1G088650.17 , HORVU4Hr1G088650.10 , HORVU2Hr1G051140.3 , HORVU2Hr1G051140.2 , HORVU2Hr1G051140.1 , HORVU4Hr1G088650.37 , HORVU4Hr1G088650.26 , HORVU4Hr1G088650.28
Wheat TraesCS2B02G251700 , TraesCS4B02G371600 , TraesCS7D02G079400 , TraesCS7D02G079400 , TraesCS2D02G233800 , TraesCS7D02G365800 , TraesCS4A02G382900 , TraesCS2A02G230100 , TraesCS4D02G365900 , TraesCS2B02G036200 , TraesCS7A02G356900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G526500 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
2 Sobic.005G231300 thaumatin, putative, expressed -
3 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
4 Sobic.006G149300 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
5 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
6 Sobic.003G083600 DNA binding protein, putative, expressed -
7 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
8 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
9 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
10 Sobic.003G132500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@subtilisin-like protease, putative, expressed -
11 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
12 Sobic.001G402400 expressed protein -
13 Sobic.002G158900 AMP-binding domain containing protein, expressed -
14 Sobic.001G500400 kinesin motor domain containing protein, expressed -
15 Sobic.007G224200 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.009G079900 endoglucanase precursor, putative, expressed -
17 Sobic.007G148300 ferric reductase, putative, expressed K13447: respiratory burst oxidase
18 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
19 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.010G104400 cysteine-rich repeat secretory protein precursor, putative, expressed -


Gene co-expression network
sample Sobic002G308200 Sobic002G308200 Sobic001G526500 Sobic001G526500 Sobic002G308200--Sobic001G526500 Sobic005G231300 Sobic005G231300 Sobic002G308200--Sobic005G231300 Sobic003G052100 Sobic003G052100 Sobic002G308200--Sobic003G052100 Sobic006G149300 Sobic006G149300 Sobic002G308200--Sobic006G149300 Sobic010G131400 Sobic010G131400 Sobic002G308200--Sobic010G131400 Sobic003G083600 Sobic003G083600 Sobic002G308200--Sobic003G083600 Sobic010G042600 Sobic010G042600 Sobic002G308200--Sobic010G042600 Sobic001G144200 Sobic001G144200 Sobic002G308200--Sobic001G144200 Sobic007G111700 Sobic007G111700 Sobic002G308200--Sobic007G111700 Sobic008G055700 Sobic008G055700 Sobic001G526500--Sobic008G055700 Sobic009G106100 Sobic009G106100 Sobic001G526500--Sobic009G106100 Sobic005G110508 Sobic005G110508 Sobic001G526500--Sobic005G110508 Sobic003G083800 Sobic003G083800 Sobic001G526500--Sobic003G083800 Sobic005G079400 Sobic005G079400 Sobic001G526500--Sobic005G079400 Sobic006G092100 Sobic006G092100 Sobic001G526500--Sobic006G092100 Sobic003G240500 Sobic003G240500 Sobic001G526500--Sobic003G240500 Sobic008G138700 Sobic008G138700 Sobic001G526500--Sobic008G138700 Sobic005G110514 Sobic005G110514 Sobic001G526500--Sobic005G110514 Sobic001G514300 Sobic001G514300 Sobic005G231300--Sobic001G514300 Sobic005G231300--Sobic003G083600 Sobic009G079900 Sobic009G079900 Sobic005G231300--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic005G231300--Sobic008G099100 Sobic007G208100 Sobic007G208100 Sobic005G231300--Sobic007G208100 Sobic006G030200 Sobic006G030200 Sobic005G231300--Sobic006G030200 Sobic001G314000 Sobic001G314000 Sobic005G231300--Sobic001G314000 Sobic008G077300 Sobic008G077300 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic001G402400 Sobic001G402400 Sobic003G052100--Sobic001G402400 Sobic007G041600 Sobic007G041600 Sobic003G052100--Sobic007G041600 Sobic002G275500 Sobic002G275500 Sobic003G052100--Sobic002G275500 Sobic010G220300 Sobic010G220300 Sobic003G052100--Sobic010G220300 Sobic006G009500 Sobic006G009500 Sobic003G052100--Sobic006G009500 Sobic003G052100--Sobic009G079900 Sobic003G296500 Sobic003G296500 Sobic003G052100--Sobic003G296500 Sobic003G052100--Sobic005G231300 Sobic004G271500 Sobic004G271500 Sobic003G052100--Sobic004G271500 Sobic002G016400 Sobic002G016400 Sobic006G149300--Sobic002G016400 Sobic006G149300--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic006G149300--Sobic010G104400 Sobic006G149300--Sobic005G231300 Sobic005G098400 Sobic005G098400 Sobic006G149300--Sobic005G098400 Sobic002G226500 Sobic002G226500 Sobic006G149300--Sobic002G226500 Sobic002G278200 Sobic002G278200 Sobic006G149300--Sobic002G278200 Sobic007G120301 Sobic007G120301 Sobic006G149300--Sobic007G120301 Sobic007G018100 Sobic007G018100 Sobic006G149300--Sobic007G018100 Sobic010G180100 Sobic010G180100 Sobic010G131400--Sobic010G180100 Sobic002G254900 Sobic002G254900 Sobic010G131400--Sobic002G254900 Sobic001G360700 Sobic001G360700 Sobic010G131400--Sobic001G360700 Sobic001G002800 Sobic001G002800 Sobic010G131400--Sobic001G002800 Sobic002G167600 Sobic002G167600 Sobic010G131400--Sobic002G167600 Sobic006G180300 Sobic006G180300 Sobic010G131400--Sobic006G180300 Sobic002G271300 Sobic002G271300 Sobic010G131400--Sobic002G271300 Sobic008G141200 Sobic008G141200 Sobic010G131400--Sobic008G141200 Sobic001G406700 Sobic001G406700 Sobic010G131400--Sobic001G406700 Sobic003G083600--Sobic005G231300 Sobic003G083600--Sobic001G514300 Sobic003G083600--Sobic009G079900 Sobic003G083600--Sobic008G099100 Sobic002G029600 Sobic002G029600 Sobic003G083600--Sobic002G029600 Sobic001G169400 Sobic001G169400 Sobic003G083600--Sobic001G169400 Sobic003G382200 Sobic003G382200 Sobic003G083600--Sobic003G382200 Sobic001G274400 Sobic001G274400 Sobic003G083600--Sobic001G274400 Sobic008G014700 Sobic008G014700 Sobic003G083600--Sobic008G014700 Sobic003G118100 Sobic003G118100 Sobic010G042600--Sobic003G118100 Sobic009G206500 Sobic009G206500 Sobic010G042600--Sobic009G206500 Sobic010G042600--Sobic001G144200 Sobic006G267500 Sobic006G267500 Sobic010G042600--Sobic006G267500 Sobic003G266400 Sobic003G266400 Sobic010G042600--Sobic003G266400 Sobic010G018500 Sobic010G018500 Sobic010G042600--Sobic010G018500 Sobic001G196000 Sobic001G196000 Sobic010G042600--Sobic001G196000 Sobic006G035600 Sobic006G035600 Sobic010G042600--Sobic006G035600 Sobic001G500400 Sobic001G500400 Sobic010G042600--Sobic001G500400 Sobic001G144200--Sobic009G206500 Sobic001G144200--Sobic010G042600 Sobic010G067800 Sobic010G067800 Sobic001G144200--Sobic010G067800 Sobic005G025900 Sobic005G025900 Sobic001G144200--Sobic005G025900 Sobic001G144200--Sobic002G275500 Sobic002G191000 Sobic002G191000 Sobic001G144200--Sobic002G191000 Sobic001G144200--Sobic004G271500 Sobic007G040301 Sobic007G040301 Sobic001G144200--Sobic007G040301 Sobic001G144200--Sobic003G118100 Sobic008G170400 Sobic008G170400 Sobic007G111700--Sobic008G170400 Sobic007G111700--Sobic002G016400 Sobic007G111700--Sobic005G098400 Sobic007G050500 Sobic007G050500 Sobic007G111700--Sobic007G050500 Sobic007G111700--Sobic005G025900 Sobic001G345200 Sobic001G345200 Sobic007G111700--Sobic001G345200 Sobic002G034301 Sobic002G034301 Sobic007G111700--Sobic002G034301 Sobic007G202100 Sobic007G202100 Sobic007G111700--Sobic007G202100 Sobic003G419600 Sobic003G419600 Sobic007G111700--Sobic003G419600
Octagon: transcription factors


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