Gene annotation
Transcriptome id Sobic.007G224200.2,Sobic.007G224200.1,Sobic.007G224200.3
Synonym Sb07g028945
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1Z5RB88 , A0A1B6PJ88 , A0A1B6PJ97
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF144
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68920 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os09g29830.2,LOC_Os09g29830.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ90628
Barley HORVU5Hr1G070510.10 , HORVU5Hr1G070510.12 , HORVU5Hr1G070510.13 , HORVU5Hr1G070510.14 , HORVU5Hr1G070510.15 , HORVU5Hr1G070510.16 , HORVU5Hr1G070510.17 , HORVU5Hr1G070510.18 , HORVU5Hr1G070510.19 , HORVU5Hr1G070510.25 , HORVU5Hr1G070510.24 , HORVU5Hr1G070510.26 , HORVU5Hr1G070510.20 , HORVU5Hr1G070510.23 , HORVU5Hr1G070510.22 , HORVU5Hr1G070510.2 , HORVU5Hr1G070510.3 , HORVU5Hr1G070510.1 , HORVU5Hr1G070510.6 , HORVU5Hr1G070510.7 , HORVU5Hr1G070510.4 , HORVU5Hr1G070510.5 , HORVU5Hr1G070510.8 , HORVU5Hr1G070510.9
Wheat TraesCS5A02G250600 , TraesCS5D02G258300 , TraesCS5B02G248600
Populus PNT10497


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G216700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
2 Sobic.001G500400 kinesin motor domain containing protein, expressed -
3 Sobic.002G308200 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
4 Sobic.004G184101 - -
5 Sobic.001G346500 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
6 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
7 Sobic.002G381400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
8 Sobic.001G114100 methyltransferase domain containing protein, expressed -
9 Sobic.001G506500 exostosin family domain containing protein, expressed -
10 Sobic.010G089600 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@trehalose phosphatase, putative, expressed K01087: trehalose 6-phosphate phosphatase
11 Sobic.007G127500 - -
12 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
13 Sobic.007G127550 - -
14 Sobic.002G274600 glycosyl transferase family 8 protein, expressed -
15 Sobic.001G388700 expressed protein -
16 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
17 Sobic.010G250300 ANTH/ENTH domain containing protein, putative, expressed -
18 Sobic.001G102100 DUF617 domain containing protein, expressed -
19 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.003G087700 glycosyltransferase protein, putative, expressed -


Gene co-expression network
sample Sobic007G224200 Sobic007G224200 Sobic010G216700 Sobic010G216700 Sobic007G224200--Sobic010G216700 Sobic001G500400 Sobic001G500400 Sobic007G224200--Sobic001G500400 Sobic002G308200 Sobic002G308200 Sobic007G224200--Sobic002G308200 Sobic004G184101 Sobic004G184101 Sobic007G224200--Sobic004G184101 Sobic001G346500 Sobic001G346500 Sobic007G224200--Sobic001G346500 Sobic008G023300 Sobic008G023300 Sobic007G224200--Sobic008G023300 Sobic002G381400 Sobic002G381400 Sobic007G224200--Sobic002G381400 Sobic001G114100 Sobic001G114100 Sobic007G224200--Sobic001G114100 Sobic001G506500 Sobic001G506500 Sobic007G224200--Sobic001G506500 Sobic002G118900 Sobic002G118900 Sobic010G216700--Sobic002G118900 Sobic002G274600 Sobic002G274600 Sobic010G216700--Sobic002G274600 Sobic005G080600 Sobic005G080600 Sobic010G216700--Sobic005G080600 Sobic007G007300 Sobic007G007300 Sobic010G216700--Sobic007G007300 Sobic007G220400 Sobic007G220400 Sobic010G216700--Sobic007G220400 Sobic010G168400 Sobic010G168400 Sobic010G216700--Sobic010G168400 Sobic002G003400 Sobic002G003400 Sobic010G216700--Sobic002G003400 Sobic006G266800 Sobic006G266800 Sobic010G216700--Sobic006G266800 Sobic010G152300 Sobic010G152300 Sobic010G216700--Sobic010G152300 Sobic002G310300 Sobic002G310300 Sobic001G500400--Sobic002G310300 Sobic003G118100 Sobic003G118100 Sobic001G500400--Sobic003G118100 Sobic010G051100 Sobic010G051100 Sobic001G500400--Sobic010G051100 Sobic010G042600 Sobic010G042600 Sobic001G500400--Sobic010G042600 Sobic006G035600 Sobic006G035600 Sobic001G500400--Sobic006G035600 Sobic004G053900 Sobic004G053900 Sobic001G500400--Sobic004G053900 Sobic002G297500 Sobic002G297500 Sobic001G500400--Sobic002G297500 Sobic001G109700 Sobic001G109700 Sobic001G500400--Sobic001G109700 Sobic004G032900 Sobic004G032900 Sobic001G500400--Sobic004G032900 Sobic001G526500 Sobic001G526500 Sobic002G308200--Sobic001G526500 Sobic005G231300 Sobic005G231300 Sobic002G308200--Sobic005G231300 Sobic003G052100 Sobic003G052100 Sobic002G308200--Sobic003G052100 Sobic006G149300 Sobic006G149300 Sobic002G308200--Sobic006G149300 Sobic010G131400 Sobic010G131400 Sobic002G308200--Sobic010G131400 Sobic003G083600 Sobic003G083600 Sobic002G308200--Sobic003G083600 Sobic002G308200--Sobic010G042600 Sobic001G144200 Sobic001G144200 Sobic002G308200--Sobic001G144200 Sobic007G111700 Sobic007G111700 Sobic002G308200--Sobic007G111700 Sobic007G127550 Sobic007G127550 Sobic004G184101--Sobic007G127550 Sobic004G184101--Sobic008G023300 Sobic010G089600 Sobic010G089600 Sobic004G184101--Sobic010G089600 Sobic003G187700 Sobic003G187700 Sobic004G184101--Sobic003G187700 Sobic010G189432 Sobic010G189432 Sobic004G184101--Sobic010G189432 Sobic004G184101--Sobic002G381400 Sobic002G096300 Sobic002G096300 Sobic004G184101--Sobic002G096300 Sobic001G213666 Sobic001G213666 Sobic004G184101--Sobic001G213666 Sobic007G127500 Sobic007G127500 Sobic004G184101--Sobic007G127500 Sobic001G346500--Sobic010G216700 Sobic001G346500--Sobic008G023300 Sobic002G197000 Sobic002G197000 Sobic001G346500--Sobic002G197000 Sobic001G346500--Sobic002G274600 Sobic001G346500--Sobic002G381400 Sobic008G071050 Sobic008G071050 Sobic001G346500--Sobic008G071050 Sobic001G346500--Sobic002G310300 Sobic002G271300 Sobic002G271300 Sobic001G346500--Sobic002G271300 Sobic002G101300 Sobic002G101300 Sobic001G346500--Sobic002G101300 Sobic008G023300--Sobic007G127500 Sobic008G023300--Sobic007G127550 Sobic008G023300--Sobic010G089600 Sobic008G023300--Sobic004G184101 Sobic008G023300--Sobic002G381400 Sobic008G023300--Sobic001G213666 Sobic004G035400 Sobic004G035400 Sobic008G023300--Sobic004G035400 Sobic010G250300 Sobic010G250300 Sobic008G023300--Sobic010G250300 Sobic008G023300--Sobic003G187700 Sobic002G381400--Sobic008G023300 Sobic002G381400--Sobic004G035400 Sobic002G381400--Sobic010G089600 Sobic002G381400--Sobic004G184101 Sobic002G381400--Sobic007G127550 Sobic001G140000 Sobic001G140000 Sobic002G381400--Sobic001G140000 Sobic002G381400--Sobic010G189432 Sobic002G381400--Sobic001G213666 Sobic004G261800 Sobic004G261800 Sobic002G381400--Sobic004G261800 Sobic003G087700 Sobic003G087700 Sobic001G114100--Sobic003G087700 Sobic001G114100--Sobic010G216700 Sobic001G114100--Sobic002G271300 Sobic001G102100 Sobic001G102100 Sobic001G114100--Sobic001G102100 Sobic004G251600 Sobic004G251600 Sobic001G114100--Sobic004G251600 Sobic005G041300 Sobic005G041300 Sobic001G114100--Sobic005G041300 Sobic002G239700 Sobic002G239700 Sobic001G114100--Sobic002G239700 Sobic001G114100--Sobic002G118900 Sobic003G205600 Sobic003G205600 Sobic001G114100--Sobic003G205600 Sobic010G082100 Sobic010G082100 Sobic001G506500--Sobic010G082100 Sobic003G240500 Sobic003G240500 Sobic001G506500--Sobic003G240500 Sobic005G048400 Sobic005G048400 Sobic001G506500--Sobic005G048400 Sobic003G176300 Sobic003G176300 Sobic001G506500--Sobic003G176300 Sobic001G506500--Sobic007G007300 Sobic004G308500 Sobic004G308500 Sobic001G506500--Sobic004G308500 Sobic001G070100 Sobic001G070100 Sobic001G506500--Sobic001G070100 Sobic001G506500--Sobic001G526500 Sobic007G149000 Sobic007G149000 Sobic001G506500--Sobic007G149000
Octagon: transcription factors


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