Gene annotation
Transcriptome id Sobic.001G102100.1
Synonym Sb01g009110
Functional annotation DUF617 domain containing protein, expressed
UniProt C5WLX8
Pfam PF04759
Panther DB PTHR31696 PTHR31696:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76610 : Protein of unknown function, DUF617
RAP-DB (Rice) LOC_Os03g52290.1 : DUF617 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G087700 glycosyltransferase protein, putative, expressed -
2 Sobic.004G251600 leaf senescence related protein, putative, expressed -
3 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
4 Sobic.004G257000 transmembrane 9 superfamily member, putative, expressed -
5 Sobic.001G217500 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
6 Sobic.001G346500 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
7 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.002G344400 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
9 Sobic.002G404100 annexin, putative, expressed -
10 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
11 Sobic.007G015200 cytochrome P450, putative, expressed -
12 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
13 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
14 Sobic.006G183900 cytochrome P450, putative, expressed -
15 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
16 Sobic.003G287200 WRKY23, expressed -
17 Sobic.004G149100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
18 Sobic.002G318200 expressed protein -
19 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.007G073000 - -


Gene co-expression network
sample Sobic001G102100 Sobic001G102100 Sobic003G087700 Sobic003G087700 Sobic001G102100--Sobic003G087700 Sobic004G251600 Sobic004G251600 Sobic001G102100--Sobic004G251600 Sobic004G232700 Sobic004G232700 Sobic001G102100--Sobic004G232700 Sobic004G257000 Sobic004G257000 Sobic001G102100--Sobic004G257000 Sobic001G217500 Sobic001G217500 Sobic001G102100--Sobic001G217500 Sobic001G346500 Sobic001G346500 Sobic001G102100--Sobic001G346500 Sobic007G212100 Sobic007G212100 Sobic001G102100--Sobic007G212100 Sobic002G344400 Sobic002G344400 Sobic001G102100--Sobic002G344400 Sobic002G404100 Sobic002G404100 Sobic001G102100--Sobic002G404100 Sobic003G087700--Sobic001G102100 Sobic001G506600 Sobic001G506600 Sobic003G087700--Sobic001G506600 Sobic002G271300 Sobic002G271300 Sobic003G087700--Sobic002G271300 Sobic005G041300 Sobic005G041300 Sobic003G087700--Sobic005G041300 Sobic006G183900 Sobic006G183900 Sobic003G087700--Sobic006G183900 Sobic008G035800 Sobic008G035800 Sobic003G087700--Sobic008G035800 Sobic008G035700 Sobic008G035700 Sobic003G087700--Sobic008G035700 Sobic003G140200 Sobic003G140200 Sobic003G087700--Sobic003G140200 Sobic003G087700--Sobic004G251600 Sobic010G250300 Sobic010G250300 Sobic004G251600--Sobic010G250300 Sobic004G251600--Sobic004G232700 Sobic004G251600--Sobic007G212100 Sobic004G251600--Sobic003G087700 Sobic004G251600--Sobic001G102100 Sobic007G127400 Sobic007G127400 Sobic004G251600--Sobic007G127400 Sobic009G176400 Sobic009G176400 Sobic004G251600--Sobic009G176400 Sobic004G275800 Sobic004G275800 Sobic004G251600--Sobic004G275800 Sobic007G127500 Sobic007G127500 Sobic004G251600--Sobic007G127500 Sobic004G232700--Sobic007G212100 Sobic002G352200 Sobic002G352200 Sobic004G232700--Sobic002G352200 Sobic001G543400 Sobic001G543400 Sobic004G232700--Sobic001G543400 Sobic004G232700--Sobic009G176400 Sobic007G014700 Sobic007G014700 Sobic004G232700--Sobic007G014700 Sobic004G232700--Sobic004G251600 Sobic004G173700 Sobic004G173700 Sobic004G232700--Sobic004G173700 Sobic004G261800 Sobic004G261800 Sobic004G232700--Sobic004G261800 Sobic002G124900 Sobic002G124900 Sobic004G232700--Sobic002G124900 Sobic004G257000--Sobic001G217500 Sobic003G151600 Sobic003G151600 Sobic004G257000--Sobic003G151600 Sobic001G040100 Sobic001G040100 Sobic004G257000--Sobic001G040100 Sobic002G101300 Sobic002G101300 Sobic004G257000--Sobic002G101300 Sobic001G031900 Sobic001G031900 Sobic004G257000--Sobic001G031900 Sobic010G253300 Sobic010G253300 Sobic004G257000--Sobic010G253300 Sobic006G035900 Sobic006G035900 Sobic004G257000--Sobic006G035900 Sobic003G348800 Sobic003G348800 Sobic004G257000--Sobic003G348800 Sobic003G389000 Sobic003G389000 Sobic004G257000--Sobic003G389000 Sobic001G217500--Sobic004G257000 Sobic001G217500--Sobic001G031900 Sobic002G395000 Sobic002G395000 Sobic001G217500--Sobic002G395000 Sobic003G218400 Sobic003G218400 Sobic001G217500--Sobic003G218400 Sobic007G013900 Sobic007G013900 Sobic001G217500--Sobic007G013900 Sobic004G170400 Sobic004G170400 Sobic001G217500--Sobic004G170400 Sobic010G059300 Sobic010G059300 Sobic001G217500--Sobic010G059300 Sobic002G078300 Sobic002G078300 Sobic001G217500--Sobic002G078300 Sobic006G058900 Sobic006G058900 Sobic001G217500--Sobic006G058900 Sobic010G216700 Sobic010G216700 Sobic001G346500--Sobic010G216700 Sobic008G023300 Sobic008G023300 Sobic001G346500--Sobic008G023300 Sobic002G197000 Sobic002G197000 Sobic001G346500--Sobic002G197000 Sobic002G274600 Sobic002G274600 Sobic001G346500--Sobic002G274600 Sobic002G381400 Sobic002G381400 Sobic001G346500--Sobic002G381400 Sobic008G071050 Sobic008G071050 Sobic001G346500--Sobic008G071050 Sobic002G310300 Sobic002G310300 Sobic001G346500--Sobic002G310300 Sobic001G346500--Sobic002G271300 Sobic001G346500--Sobic002G101300 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic003G137600 Sobic003G137600 Sobic007G212100--Sobic003G137600 Sobic004G232500 Sobic004G232500 Sobic007G212100--Sobic004G232500 Sobic007G212100--Sobic010G250300 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic002G344400--Sobic003G087700 Sobic002G344400--Sobic001G102100 Sobic003G153100 Sobic003G153100 Sobic002G344400--Sobic003G153100 Sobic002G344400--Sobic001G506600 Sobic002G344400--Sobic004G251600 Sobic004G094000 Sobic004G094000 Sobic002G344400--Sobic004G094000 Sobic006G117500 Sobic006G117500 Sobic002G344400--Sobic006G117500 Sobic010G274400 Sobic010G274400 Sobic002G344400--Sobic010G274400 Sobic001G506700 Sobic001G506700 Sobic002G344400--Sobic001G506700 Sobic006G028500 Sobic006G028500 Sobic002G404100--Sobic006G028500 Sobic002G216100 Sobic002G216100 Sobic002G404100--Sobic002G216100 Sobic010G148800 Sobic010G148800 Sobic002G404100--Sobic010G148800 Sobic003G240400 Sobic003G240400 Sobic002G404100--Sobic003G240400 Sobic001G360500 Sobic001G360500 Sobic002G404100--Sobic001G360500 Sobic005G065900 Sobic005G065900 Sobic002G404100--Sobic005G065900 Sobic004G348800 Sobic004G348800 Sobic002G404100--Sobic004G348800 Sobic004G322800 Sobic004G322800 Sobic002G404100--Sobic004G322800 Sobic010G082000 Sobic010G082000 Sobic002G404100--Sobic010G082000
Octagon: transcription factors


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