Gene annotation
Transcriptome id Sobic.004G251600.1
Synonym Sb04g029120, TBL21
Functional annotation leaf senescence related protein, putative, expressed
UniProt C5XZE1
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF43
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G15890 : TRICHOME BIREFRINGENCE-LIKE 21
RAP-DB (Rice) LOC_Os02g49650.1 : leaf senescence related protein, putative, expressed
MaizeGDB (Corn) Zm00025a021897 , Zm00025a021895
Brachypodium KQK18632
Barley HORVU6Hr1G072660.4 , HORVU6Hr1G072660.1 , HORVU6Hr1G072660.3 , HORVU6Hr1G072660.2 , HORVU7Hr1G043010.3 , HORVU7Hr1G043010.2 , HORVU7Hr1G043010.1
Wheat TraesCS6A02G164400 , TraesCS6D02G159200 , TraesCS7D02G212300 , TraesCS6A02G289900 , TraesCS6D02G148400 , TraesCS6D02G269000 , TraesCS6B02G187200 , TraesCS6B02G320200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G250300 ANTH/ENTH domain containing protein, putative, expressed -
2 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
3 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.003G087700 glycosyltransferase protein, putative, expressed -
5 Sobic.001G102100 DUF617 domain containing protein, expressed -
6 Sobic.007G127400 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
7 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.004G275800 U-box, putative, expressed -
9 Sobic.007G127500 - -
10 Sobic.009G219700 - -
11 Sobic.002G082800 DUF567 domain containing protein, putative, expressed -
12 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
13 Sobic.004G094000 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
14 Sobic.001G346500 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
15 Sobic.001G308600 POEI31 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
16 Sobic.004G173700 SLL1 protein, putative, expressed -
17 Sobic.002G344400 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
18 Sobic.001G114100 methyltransferase domain containing protein, expressed -
19 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
20 Sobic.001G217500 transporter-related, putative, expressed K15285: solute carrier family 35, member E3


Gene co-expression network
sample Sobic004G251600 Sobic004G251600 Sobic010G250300 Sobic010G250300 Sobic004G251600--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic004G251600--Sobic004G232700 Sobic007G212100 Sobic007G212100 Sobic004G251600--Sobic007G212100 Sobic003G087700 Sobic003G087700 Sobic004G251600--Sobic003G087700 Sobic001G102100 Sobic001G102100 Sobic004G251600--Sobic001G102100 Sobic007G127400 Sobic007G127400 Sobic004G251600--Sobic007G127400 Sobic009G176400 Sobic009G176400 Sobic004G251600--Sobic009G176400 Sobic004G275800 Sobic004G275800 Sobic004G251600--Sobic004G275800 Sobic007G127500 Sobic007G127500 Sobic004G251600--Sobic007G127500 Sobic010G250300--Sobic007G127500 Sobic004G261800 Sobic004G261800 Sobic010G250300--Sobic004G261800 Sobic008G023300 Sobic008G023300 Sobic010G250300--Sobic008G023300 Sobic003G013700 Sobic003G013700 Sobic010G250300--Sobic003G013700 Sobic003G187700 Sobic003G187700 Sobic010G250300--Sobic003G187700 Sobic001G303900 Sobic001G303900 Sobic010G250300--Sobic001G303900 Sobic010G250300--Sobic007G212100 Sobic001G342101 Sobic001G342101 Sobic010G250300--Sobic001G342101 Sobic006G256000 Sobic006G256000 Sobic010G250300--Sobic006G256000 Sobic004G232700--Sobic007G212100 Sobic002G352200 Sobic002G352200 Sobic004G232700--Sobic002G352200 Sobic001G543400 Sobic001G543400 Sobic004G232700--Sobic001G543400 Sobic004G232700--Sobic009G176400 Sobic007G014700 Sobic007G014700 Sobic004G232700--Sobic007G014700 Sobic004G232700--Sobic004G251600 Sobic004G173700 Sobic004G173700 Sobic004G232700--Sobic004G173700 Sobic004G232700--Sobic004G261800 Sobic002G124900 Sobic002G124900 Sobic004G232700--Sobic002G124900 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic003G137600 Sobic003G137600 Sobic007G212100--Sobic003G137600 Sobic004G232500 Sobic004G232500 Sobic007G212100--Sobic004G232500 Sobic007G212100--Sobic010G250300 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic003G087700--Sobic001G102100 Sobic001G506600 Sobic001G506600 Sobic003G087700--Sobic001G506600 Sobic002G271300 Sobic002G271300 Sobic003G087700--Sobic002G271300 Sobic005G041300 Sobic005G041300 Sobic003G087700--Sobic005G041300 Sobic006G183900 Sobic006G183900 Sobic003G087700--Sobic006G183900 Sobic008G035800 Sobic008G035800 Sobic003G087700--Sobic008G035800 Sobic008G035700 Sobic008G035700 Sobic003G087700--Sobic008G035700 Sobic003G140200 Sobic003G140200 Sobic003G087700--Sobic003G140200 Sobic003G087700--Sobic004G251600 Sobic001G102100--Sobic003G087700 Sobic001G102100--Sobic004G251600 Sobic001G102100--Sobic004G232700 Sobic004G257000 Sobic004G257000 Sobic001G102100--Sobic004G257000 Sobic001G217500 Sobic001G217500 Sobic001G102100--Sobic001G217500 Sobic001G346500 Sobic001G346500 Sobic001G102100--Sobic001G346500 Sobic001G102100--Sobic007G212100 Sobic002G344400 Sobic002G344400 Sobic001G102100--Sobic002G344400 Sobic002G404100 Sobic002G404100 Sobic001G102100--Sobic002G404100 Sobic002G082800 Sobic002G082800 Sobic007G127400--Sobic002G082800 Sobic006G096100 Sobic006G096100 Sobic007G127400--Sobic006G096100 Sobic007G127400--Sobic010G250300 Sobic007G127400--Sobic007G212100 Sobic007G127400--Sobic004G251600 Sobic007G127400--Sobic004G232700 Sobic007G127400--Sobic008G023300 Sobic007G127400--Sobic004G261800 Sobic007G127400--Sobic004G232500 Sobic009G176400--Sobic007G212100 Sobic009G176400--Sobic004G173700 Sobic009G176400--Sobic004G247500 Sobic009G176400--Sobic003G137600 Sobic009G157800 Sobic009G157800 Sobic009G176400--Sobic009G157800 Sobic009G176400--Sobic004G232500 Sobic001G365700 Sobic001G365700 Sobic009G176400--Sobic001G365700 Sobic010G216400 Sobic010G216400 Sobic009G176400--Sobic010G216400 Sobic009G176400--Sobic004G232700 Sobic004G275800--Sobic006G096100 Sobic004G275800--Sobic002G082800 Sobic004G275800--Sobic004G251600 Sobic002G118900 Sobic002G118900 Sobic004G275800--Sobic002G118900 Sobic004G275800--Sobic007G127400 Sobic010G066800 Sobic010G066800 Sobic004G275800--Sobic010G066800 Sobic003G269900 Sobic003G269900 Sobic004G275800--Sobic003G269900 Sobic008G158266 Sobic008G158266 Sobic004G275800--Sobic008G158266 Sobic010G158400 Sobic010G158400 Sobic004G275800--Sobic010G158400 Sobic007G127500--Sobic008G023300 Sobic010G089600 Sobic010G089600 Sobic007G127500--Sobic010G089600 Sobic007G127550 Sobic007G127550 Sobic007G127500--Sobic007G127550 Sobic007G127500--Sobic010G250300 Sobic007G127500--Sobic003G187700 Sobic001G213666 Sobic001G213666 Sobic007G127500--Sobic001G213666 Sobic007G127500--Sobic006G256000 Sobic007G127500--Sobic001G342101 Sobic010G189432 Sobic010G189432 Sobic007G127500--Sobic010G189432
Octagon: transcription factors


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