Gene annotation
Transcriptome id Sobic.001G114100.1
Synonym
Functional annotation methyltransferase domain containing protein, expressed
UniProt A0A1Z5S5A0
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF720
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT5G40830 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os04g36710.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016959
Brachypodium -
Barley HORVU2Hr1G077530.2 , HORVU2Hr1G077530.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G087700 glycosyltransferase protein, putative, expressed -
2 Sobic.010G216700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
3 Sobic.002G271300 NC domain-containing protein, putative, expressed -
4 Sobic.001G102100 DUF617 domain containing protein, expressed -
5 Sobic.004G251600 leaf senescence related protein, putative, expressed -
6 Sobic.005G041300 amino acid permease family protein, putative, expressed -
7 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
8 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
9 Sobic.003G205600 uncharacterized protein At4g06744 precursor, putative, expressed -
10 Sobic.006G252600 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
11 Sobic.002G404100 annexin, putative, expressed -
12 Sobic.001G346500 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
13 Sobic.001G506600 exostosin family domain containing protein, expressed -
14 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
15 Sobic.003G419300 xylanase inhibitor, putative, expressed -
16 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
17 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
18 Sobic.003G097300 - -
19 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.007G224200 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G114100 Sobic001G114100 Sobic003G087700 Sobic003G087700 Sobic001G114100--Sobic003G087700 Sobic010G216700 Sobic010G216700 Sobic001G114100--Sobic010G216700 Sobic002G271300 Sobic002G271300 Sobic001G114100--Sobic002G271300 Sobic001G102100 Sobic001G102100 Sobic001G114100--Sobic001G102100 Sobic004G251600 Sobic004G251600 Sobic001G114100--Sobic004G251600 Sobic005G041300 Sobic005G041300 Sobic001G114100--Sobic005G041300 Sobic002G239700 Sobic002G239700 Sobic001G114100--Sobic002G239700 Sobic002G118900 Sobic002G118900 Sobic001G114100--Sobic002G118900 Sobic003G205600 Sobic003G205600 Sobic001G114100--Sobic003G205600 Sobic003G087700--Sobic001G102100 Sobic001G506600 Sobic001G506600 Sobic003G087700--Sobic001G506600 Sobic003G087700--Sobic002G271300 Sobic003G087700--Sobic005G041300 Sobic006G183900 Sobic006G183900 Sobic003G087700--Sobic006G183900 Sobic008G035800 Sobic008G035800 Sobic003G087700--Sobic008G035800 Sobic008G035700 Sobic008G035700 Sobic003G087700--Sobic008G035700 Sobic003G140200 Sobic003G140200 Sobic003G087700--Sobic003G140200 Sobic003G087700--Sobic004G251600 Sobic010G216700--Sobic002G118900 Sobic002G274600 Sobic002G274600 Sobic010G216700--Sobic002G274600 Sobic005G080600 Sobic005G080600 Sobic010G216700--Sobic005G080600 Sobic007G007300 Sobic007G007300 Sobic010G216700--Sobic007G007300 Sobic007G220400 Sobic007G220400 Sobic010G216700--Sobic007G220400 Sobic010G168400 Sobic010G168400 Sobic010G216700--Sobic010G168400 Sobic002G003400 Sobic002G003400 Sobic010G216700--Sobic002G003400 Sobic006G266800 Sobic006G266800 Sobic010G216700--Sobic006G266800 Sobic010G152300 Sobic010G152300 Sobic010G216700--Sobic010G152300 Sobic009G059500 Sobic009G059500 Sobic002G271300--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic002G271300--Sobic002G186900 Sobic005G022500 Sobic005G022500 Sobic002G271300--Sobic005G022500 Sobic010G131400 Sobic010G131400 Sobic002G271300--Sobic010G131400 Sobic008G168100 Sobic008G168100 Sobic002G271300--Sobic008G168100 Sobic002G254900 Sobic002G254900 Sobic002G271300--Sobic002G254900 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic001G102100--Sobic003G087700 Sobic001G102100--Sobic004G251600 Sobic004G232700 Sobic004G232700 Sobic001G102100--Sobic004G232700 Sobic004G257000 Sobic004G257000 Sobic001G102100--Sobic004G257000 Sobic001G217500 Sobic001G217500 Sobic001G102100--Sobic001G217500 Sobic001G346500 Sobic001G346500 Sobic001G102100--Sobic001G346500 Sobic007G212100 Sobic007G212100 Sobic001G102100--Sobic007G212100 Sobic002G344400 Sobic002G344400 Sobic001G102100--Sobic002G344400 Sobic002G404100 Sobic002G404100 Sobic001G102100--Sobic002G404100 Sobic010G250300 Sobic010G250300 Sobic004G251600--Sobic010G250300 Sobic004G251600--Sobic004G232700 Sobic004G251600--Sobic007G212100 Sobic004G251600--Sobic003G087700 Sobic004G251600--Sobic001G102100 Sobic007G127400 Sobic007G127400 Sobic004G251600--Sobic007G127400 Sobic009G176400 Sobic009G176400 Sobic004G251600--Sobic009G176400 Sobic004G275800 Sobic004G275800 Sobic004G251600--Sobic004G275800 Sobic007G127500 Sobic007G127500 Sobic004G251600--Sobic007G127500 Sobic001G430100 Sobic001G430100 Sobic005G041300--Sobic001G430100 Sobic004G258900 Sobic004G258900 Sobic005G041300--Sobic004G258900 Sobic008G034700 Sobic008G034700 Sobic005G041300--Sobic008G034700 Sobic005G041300--Sobic006G183900 Sobic001G455100 Sobic001G455100 Sobic005G041300--Sobic001G455100 Sobic010G096400 Sobic010G096400 Sobic005G041300--Sobic010G096400 Sobic005G041300--Sobic008G035800 Sobic004G348800 Sobic004G348800 Sobic005G041300--Sobic004G348800 Sobic002G365600 Sobic002G365600 Sobic005G041300--Sobic002G365600 Sobic008G077900 Sobic008G077900 Sobic002G239700--Sobic008G077900 Sobic005G222600 Sobic005G222600 Sobic002G239700--Sobic005G222600 Sobic006G205500 Sobic006G205500 Sobic002G239700--Sobic006G205500 Sobic001G232000 Sobic001G232000 Sobic002G239700--Sobic001G232000 Sobic005G071700 Sobic005G071700 Sobic002G239700--Sobic005G071700 Sobic003G419300 Sobic003G419300 Sobic002G239700--Sobic003G419300 Sobic003G001300 Sobic003G001300 Sobic002G239700--Sobic003G001300 Sobic003G419400 Sobic003G419400 Sobic002G239700--Sobic003G419400 Sobic009G060700 Sobic009G060700 Sobic002G239700--Sobic009G060700 Sobic003G269900 Sobic003G269900 Sobic002G118900--Sobic003G269900 Sobic002G115600 Sobic002G115600 Sobic002G118900--Sobic002G115600 Sobic001G263300 Sobic001G263300 Sobic002G118900--Sobic001G263300 Sobic005G216500 Sobic005G216500 Sobic002G118900--Sobic005G216500 Sobic002G118900--Sobic002G003400 Sobic006G196400 Sobic006G196400 Sobic002G118900--Sobic006G196400 Sobic009G032900 Sobic009G032900 Sobic002G118900--Sobic009G032900 Sobic003G046700 Sobic003G046700 Sobic002G118900--Sobic003G046700 Sobic002G118900--Sobic005G080600 Sobic003G000100 Sobic003G000100 Sobic003G205600--Sobic003G000100 Sobic003G240400 Sobic003G240400 Sobic003G205600--Sobic003G240400 Sobic004G322100 Sobic004G322100 Sobic003G205600--Sobic004G322100 Sobic010G027300 Sobic010G027300 Sobic003G205600--Sobic010G027300 Sobic008G016000 Sobic008G016000 Sobic003G205600--Sobic008G016000 Sobic001G229000 Sobic001G229000 Sobic003G205600--Sobic001G229000 Sobic006G028500 Sobic006G028500 Sobic003G205600--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic003G205600--Sobic004G110700 Sobic004G271800 Sobic004G271800 Sobic003G205600--Sobic004G271800
Octagon: transcription factors


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