Gene annotation
Transcriptome id Sobic.010G216700.1
Synonym AGR1, PIN2, AGR, ATPIN2, EIR1, Sb10g026300, SbPIN11, efflux carriers pin-formed, WAV6
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments" (PubMedID : 20528920)
auxin efflux carrier component, putative, expressed
UniProt C5Z7A0
Pfam PF03547
Panther DB PTHR31752 PTHR31752:SF4
NCBI CDD -
KEGG Orthology K13947; auxin efflux carrier family protein
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G57090 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os06g44970.1 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) Zm00025a033405 , Zm00025a049447 , Zm00025a051668 , Zm00025a022017 , Zm00025a028269 , Zm00025a049923
Brachypodium KQK01960 , KQJ89538 , KQK04736 , KQK18833 , KQK16936 , KQK08941
Barley HORVU7Hr1G038700.9 , HORVU7Hr1G038700.8 , HORVU7Hr1G038700.1 , HORVU7Hr1G038700.3 , HORVU7Hr1G038700.2 , HORVU7Hr1G038700.5 , HORVU4Hr1G026680.14 , HORVU4Hr1G026680.12 , HORVU4Hr1G026680.13 , HORVU4Hr1G026680.10 , HORVU4Hr1G026680.11 , HORVU7Hr1G110470.10 , HORVU7Hr1G110470.11 , HORVU7Hr1G038700.20 , HORVU7Hr1G038700.21 , HORVU7Hr1G038700.22 , HORVU7Hr1G038700.23 , HORVU7Hr1G038700.24 , HORVU4Hr1G026680.4 , HORVU4Hr1G026680.5 , HORVU4Hr1G026680.6 , HORVU4Hr1G026680.7 , HORVU4Hr1G026680.1 , HORVU4Hr1G026680.2 , HORVU4Hr1G026680.3 , HORVU4Hr1G026680.8 , HORVU4Hr1G026680.9 , HORVU7Hr1G038700.19 , HORVU7Hr1G038700.18 , HORVU7Hr1G038700.15 , HORVU7Hr1G038700.14 , HORVU7Hr1G038700.17 , HORVU7Hr1G038700.16 , HORVU7Hr1G038700.13 , HORVU7Hr1G038700.12 , HORVU3Hr1G057630.14 , HORVU3Hr1G057630.15 , HORVU3Hr1G057630.16 , HORVU3Hr1G057630.17 , HORVU3Hr1G057630.10 , HORVU3Hr1G057630.11 , HORVU3Hr1G057630.12 , HORVU3Hr1G057630.13 , HORVU3Hr1G057630.18 , HORVU3Hr1G057630.19 , HORVU7Hr1G110470.8 , HORVU7Hr1G110470.9 , HORVU7Hr1G110470.2 , HORVU7Hr1G110470.3 , HORVU7Hr1G110470.1 , HORVU7Hr1G110470.6 , HORVU7Hr1G110470.7 , HORVU7Hr1G110470.4 , HORVU7Hr1G110470.5 , HORVU3Hr1G057630.28 , HORVU3Hr1G057630.21 , HORVU3Hr1G057630.20 , HORVU3Hr1G057630.23 , HORVU3Hr1G057630.22 , HORVU3Hr1G057630.25 , HORVU3Hr1G057630.24 , HORVU3Hr1G057630.27 , HORVU3Hr1G057630.26 , HORVU3Hr1G057630.8 , HORVU3Hr1G057630.9 , HORVU3Hr1G057630.6 , HORVU3Hr1G057630.7 , HORVU3Hr1G057630.4 , HORVU3Hr1G057630.5 , HORVU3Hr1G057630.2 , HORVU3Hr1G057630.3 , HORVU3Hr1G057630.1
Wheat TraesCS4A02G188100 , TraesCS4D02G125300 , TraesCS3D02G221900 , TraesCS4B02G130100 , TraesCS6A02G308600 , TraesCS3A02G231500 , TraesCS6B02G337300 , TraesCS7B02G095500 , TraesCS6B02G337300 , TraesCS7A02G492400 , TraesCS7A02G190600 , TraesCS6B02G337300 , TraesCS6B02G337300 , TraesCS6D02G287800 , TraesCS7B02G398100 , TraesCS7D02G191600 , TraesCS3B02G260700 , TraesCS3B02G260700 , TraesCS7D02G478800 , TraesCS7D02G478800
Populus PNT15934 , PNT15935 , PNT15930 , PNT15931 , PNT15932 , PNT15933


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
2 Sobic.002G274600 glycosyl transferase family 8 protein, expressed -
3 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
4 Sobic.007G007300 methyltransferase domain containing protein, expressed -
5 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.010G168400 ferroportin1 domain containing protein, expressed K14685: SLC40A1, solute carrier family 40 (iron-regulated transporter), member 1
7 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.006G266800 aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.010G152300 glycosyltransferase, putative, expressed -
10 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
11 Sobic.009G058400 expressed protein -
12 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
13 Sobic.009G084400 transporter family protein, putative, expressed -
14 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
15 Sobic.005G012600 LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.006G196400 U-box, putative, expressed -
17 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
18 Sobic.005G079100 dirigent, putative -
19 Sobic.002G197000 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
20 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic010G216700 Sobic010G216700 Sobic002G118900 Sobic002G118900 Sobic010G216700--Sobic002G118900 Sobic002G274600 Sobic002G274600 Sobic010G216700--Sobic002G274600 Sobic005G080600 Sobic005G080600 Sobic010G216700--Sobic005G080600 Sobic007G007300 Sobic007G007300 Sobic010G216700--Sobic007G007300 Sobic007G220400 Sobic007G220400 Sobic010G216700--Sobic007G220400 Sobic010G168400 Sobic010G168400 Sobic010G216700--Sobic010G168400 Sobic002G003400 Sobic002G003400 Sobic010G216700--Sobic002G003400 Sobic006G266800 Sobic006G266800 Sobic010G216700--Sobic006G266800 Sobic010G152300 Sobic010G152300 Sobic010G216700--Sobic010G152300 Sobic003G269900 Sobic003G269900 Sobic002G118900--Sobic003G269900 Sobic002G115600 Sobic002G115600 Sobic002G118900--Sobic002G115600 Sobic001G263300 Sobic001G263300 Sobic002G118900--Sobic001G263300 Sobic005G216500 Sobic005G216500 Sobic002G118900--Sobic005G216500 Sobic002G118900--Sobic002G003400 Sobic006G196400 Sobic006G196400 Sobic002G118900--Sobic006G196400 Sobic009G032900 Sobic009G032900 Sobic002G118900--Sobic009G032900 Sobic003G046700 Sobic003G046700 Sobic002G118900--Sobic003G046700 Sobic002G118900--Sobic005G080600 Sobic009G084400 Sobic009G084400 Sobic002G274600--Sobic009G084400 Sobic002G197000 Sobic002G197000 Sobic002G274600--Sobic002G197000 Sobic004G079900 Sobic004G079900 Sobic002G274600--Sobic004G079900 Sobic010G010000 Sobic010G010000 Sobic002G274600--Sobic010G010000 Sobic004G014600 Sobic004G014600 Sobic002G274600--Sobic004G014600 Sobic001G218400 Sobic001G218400 Sobic002G274600--Sobic001G218400 Sobic002G029600 Sobic002G029600 Sobic002G274600--Sobic002G029600 Sobic006G171100 Sobic006G171100 Sobic002G274600--Sobic006G171100 Sobic005G106300 Sobic005G106300 Sobic002G274600--Sobic005G106300 Sobic007G206800 Sobic007G206800 Sobic005G080600--Sobic007G206800 Sobic005G080600--Sobic006G196400 Sobic005G080600--Sobic007G220400 Sobic002G391400 Sobic002G391400 Sobic005G080600--Sobic002G391400 Sobic009G259800 Sobic009G259800 Sobic005G080600--Sobic009G259800 Sobic004G119800 Sobic004G119800 Sobic005G080600--Sobic004G119800 Sobic002G334000 Sobic002G334000 Sobic005G080600--Sobic002G334000 Sobic002G068000 Sobic002G068000 Sobic005G080600--Sobic002G068000 Sobic010G241900 Sobic010G241900 Sobic005G080600--Sobic010G241900 Sobic007G090600 Sobic007G090600 Sobic007G007300--Sobic007G090600 Sobic004G322000 Sobic004G322000 Sobic007G007300--Sobic004G322000 Sobic003G095100 Sobic003G095100 Sobic007G007300--Sobic003G095100 Sobic003G282300 Sobic003G282300 Sobic007G007300--Sobic003G282300 Sobic004G308500 Sobic004G308500 Sobic007G007300--Sobic004G308500 Sobic003G215300 Sobic003G215300 Sobic007G007300--Sobic003G215300 Sobic006G133200 Sobic006G133200 Sobic007G007300--Sobic006G133200 Sobic007G007300--Sobic004G014600 Sobic005G052700 Sobic005G052700 Sobic007G007300--Sobic005G052700 Sobic007G220400--Sobic010G241900 Sobic010G191700 Sobic010G191700 Sobic007G220400--Sobic010G191700 Sobic007G220400--Sobic007G206800 Sobic002G111900 Sobic002G111900 Sobic007G220400--Sobic002G111900 Sobic005G226350 Sobic005G226350 Sobic007G220400--Sobic005G226350 Sobic007G220400--Sobic002G391400 Sobic005G134200 Sobic005G134200 Sobic007G220400--Sobic005G134200 Sobic010G128300 Sobic010G128300 Sobic007G220400--Sobic010G128300 Sobic007G220400--Sobic002G334000 Sobic001G209300 Sobic001G209300 Sobic010G168400--Sobic001G209300 Sobic010G168400--Sobic004G119800 Sobic002G195600 Sobic002G195600 Sobic010G168400--Sobic002G195600 Sobic001G182200 Sobic001G182200 Sobic010G168400--Sobic001G182200 Sobic010G168400--Sobic005G080600 Sobic010G241800 Sobic010G241800 Sobic010G168400--Sobic010G241800 Sobic005G067300 Sobic005G067300 Sobic010G168400--Sobic005G067300 Sobic004G083500 Sobic004G083500 Sobic010G168400--Sobic004G083500 Sobic010G168400--Sobic006G196400 Sobic005G175900 Sobic005G175900 Sobic002G003400--Sobic005G175900 Sobic001G232000 Sobic001G232000 Sobic002G003400--Sobic001G232000 Sobic002G003400--Sobic006G196400 Sobic002G003400--Sobic002G115600 Sobic002G003400--Sobic007G090600 Sobic009G060700 Sobic009G060700 Sobic002G003400--Sobic009G060700 Sobic002G003400--Sobic001G263300 Sobic004G008600 Sobic004G008600 Sobic002G003400--Sobic004G008600 Sobic002G003400--Sobic002G118900 Sobic006G266800--Sobic002G195600 Sobic006G266800--Sobic003G215300 Sobic006G266800--Sobic007G007300 Sobic001G503000 Sobic001G503000 Sobic006G266800--Sobic001G503000 Sobic007G073000 Sobic007G073000 Sobic006G266800--Sobic007G073000 Sobic006G266800--Sobic006G196400 Sobic006G266800--Sobic002G115600 Sobic006G266800--Sobic004G322000 Sobic008G138900 Sobic008G138900 Sobic006G266800--Sobic008G138900 Sobic010G152300--Sobic009G060700 Sobic006G092100 Sobic006G092100 Sobic010G152300--Sobic006G092100 Sobic010G152300--Sobic005G134200 Sobic010G213600 Sobic010G213600 Sobic010G152300--Sobic010G213600 Sobic002G391300 Sobic002G391300 Sobic010G152300--Sobic002G391300 Sobic002G029500 Sobic002G029500 Sobic010G152300--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic010G152300--Sobic002G289500 Sobic010G152300--Sobic010G191700 Sobic003G441601 Sobic003G441601 Sobic010G152300--Sobic003G441601
Octagon: transcription factors


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