Gene annotation
Transcriptome id Sobic.003G097300.1
Synonym
Functional annotation -
UniProt A0A1B6Q2F0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a023726
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G110700 DNA binding protein, putative, expressed -
2 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.007G109600 expressed protein -
4 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
5 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
6 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
7 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
8 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
9 Sobic.005G097600 gibberellin 20 oxidase 2, putative, expressed -
10 Sobic.001G508532 - -
11 Sobic.003G240400 leaf senescence related protein, putative, expressed -
12 Sobic.010G271200 expressed protein -
13 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
15 Sobic.006G183900 cytochrome P450, putative, expressed -
16 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
17 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
18 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
19 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G097300 Sobic003G097300 Sobic004G110700 Sobic004G110700 Sobic003G097300--Sobic004G110700 Sobic002G003700 Sobic002G003700 Sobic003G097300--Sobic002G003700 Sobic007G109600 Sobic007G109600 Sobic003G097300--Sobic007G109600 Sobic003G269600 Sobic003G269600 Sobic003G097300--Sobic003G269600 Sobic001G229000 Sobic001G229000 Sobic003G097300--Sobic001G229000 Sobic002G122400 Sobic002G122400 Sobic003G097300--Sobic002G122400 Sobic006G150100 Sobic006G150100 Sobic003G097300--Sobic006G150100 Sobic006G028500 Sobic006G028500 Sobic003G097300--Sobic006G028500 Sobic005G097600 Sobic005G097600 Sobic003G097300--Sobic005G097600 Sobic004G110700--Sobic006G028500 Sobic004G110700--Sobic003G269600 Sobic004G110700--Sobic006G150100 Sobic003G140700 Sobic003G140700 Sobic004G110700--Sobic003G140700 Sobic004G110700--Sobic002G003700 Sobic004G322100 Sobic004G322100 Sobic004G110700--Sobic004G322100 Sobic005G127400 Sobic005G127400 Sobic004G110700--Sobic005G127400 Sobic004G110700--Sobic001G229000 Sobic006G019700 Sobic006G019700 Sobic004G110700--Sobic006G019700 Sobic002G003700--Sobic006G150100 Sobic002G003700--Sobic004G110700 Sobic002G003700--Sobic005G127400 Sobic006G170600 Sobic006G170600 Sobic002G003700--Sobic006G170600 Sobic003G349400 Sobic003G349400 Sobic002G003700--Sobic003G349400 Sobic002G003700--Sobic002G122400 Sobic002G003700--Sobic001G229000 Sobic003G132400 Sobic003G132400 Sobic002G003700--Sobic003G132400 Sobic002G003700--Sobic006G028500 Sobic006G183900 Sobic006G183900 Sobic007G109600--Sobic006G183900 Sobic004G248500 Sobic004G248500 Sobic007G109600--Sobic004G248500 Sobic006G028400 Sobic006G028400 Sobic007G109600--Sobic006G028400 Sobic007G109600--Sobic005G097600 Sobic001G212451 Sobic001G212451 Sobic007G109600--Sobic001G212451 Sobic002G365500 Sobic002G365500 Sobic007G109600--Sobic002G365500 Sobic002G365600 Sobic002G365600 Sobic007G109600--Sobic002G365600 Sobic008G034700 Sobic008G034700 Sobic007G109600--Sobic008G034700 Sobic007G109600--Sobic003G269600 Sobic003G269600--Sobic004G110700 Sobic003G399600 Sobic003G399600 Sobic003G269600--Sobic003G399600 Sobic006G274933 Sobic006G274933 Sobic003G269600--Sobic006G274933 Sobic003G269600--Sobic006G150100 Sobic002G183700 Sobic002G183700 Sobic003G269600--Sobic002G183700 Sobic010G106500 Sobic010G106500 Sobic003G269600--Sobic010G106500 Sobic003G121100 Sobic003G121100 Sobic003G269600--Sobic003G121100 Sobic003G269600--Sobic003G140700 Sobic003G269600--Sobic006G170600 Sobic007G158800 Sobic007G158800 Sobic001G229000--Sobic007G158800 Sobic001G229000--Sobic006G028500 Sobic001G229000--Sobic004G322100 Sobic001G502000 Sobic001G502000 Sobic001G229000--Sobic001G502000 Sobic007G086300 Sobic007G086300 Sobic001G229000--Sobic007G086300 Sobic001G229000--Sobic004G110700 Sobic010G152400 Sobic010G152400 Sobic001G229000--Sobic010G152400 Sobic004G306900 Sobic004G306900 Sobic001G229000--Sobic004G306900 Sobic008G019800 Sobic008G019800 Sobic001G229000--Sobic008G019800 Sobic002G412600 Sobic002G412600 Sobic002G122400--Sobic002G412600 Sobic010G006200 Sobic010G006200 Sobic002G122400--Sobic010G006200 Sobic002G122400--Sobic002G003700 Sobic010G146300 Sobic010G146300 Sobic002G122400--Sobic010G146300 Sobic002G122400--Sobic006G150100 Sobic002G122400--Sobic006G170600 Sobic010G139100 Sobic010G139100 Sobic002G122400--Sobic010G139100 Sobic001G293000 Sobic001G293000 Sobic002G122400--Sobic001G293000 Sobic002G307900 Sobic002G307900 Sobic002G122400--Sobic002G307900 Sobic006G150100--Sobic003G349400 Sobic006G150100--Sobic005G127400 Sobic006G150100--Sobic002G003700 Sobic006G150100--Sobic004G110700 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G225500 Sobic006G225500 Sobic006G150100--Sobic006G225500 Sobic006G028500--Sobic004G306900 Sobic006G028500--Sobic006G019700 Sobic006G028500--Sobic004G110700 Sobic006G028500--Sobic001G229000 Sobic003G240400 Sobic003G240400 Sobic006G028500--Sobic003G240400 Sobic010G082000 Sobic010G082000 Sobic006G028500--Sobic010G082000 Sobic006G028500--Sobic004G322100 Sobic006G028500--Sobic010G152400 Sobic003G000100 Sobic003G000100 Sobic006G028500--Sobic003G000100 Sobic001G263300 Sobic001G263300 Sobic005G097600--Sobic001G263300 Sobic005G097600--Sobic002G003700 Sobic002G115600 Sobic002G115600 Sobic005G097600--Sobic002G115600 Sobic004G351200 Sobic004G351200 Sobic005G097600--Sobic004G351200 Sobic005G097600--Sobic010G158400 Sobic005G097600--Sobic003G240400 Sobic005G175900 Sobic005G175900 Sobic005G097600--Sobic005G175900 Sobic005G097600--Sobic004G248500 Sobic002G118900 Sobic002G118900 Sobic005G097600--Sobic002G118900
Octagon: transcription factors


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