Gene annotation
Transcriptome id Sobic.001G388700.1
Synonym Sb01g036840
Functional annotation expressed protein
UniProt A0A1B6QNK0
Pfam -
Panther DB PTHR13140 PTHR13140:SF164
NCBI CDD KOG0978; E3 ubiquitin ligase involved in syntaxin degradation
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39300 : -
RAP-DB (Rice) LOC_Os03g20580.1 : expressed protein
MaizeGDB (Corn) Zm00025a015480 , Zm00025a007743
Brachypodium PNT77505 , PNT77504 , PNT77506 , PNT77503
Barley HORVU5Hr1G002110.28 , HORVU5Hr1G002110.22 , HORVU5Hr1G002110.20 , HORVU5Hr1G002110.27 , HORVU5Hr1G040670.1 , HORVU4Hr1G051980.11 , HORVU4Hr1G051980.10 , HORVU4Hr1G051980.12 , HORVU2Hr1G114960.11 , HORVU2Hr1G114960.10 , HORVU2Hr1G114960.13 , HORVU2Hr1G114960.12 , HORVU2Hr1G114960.15 , HORVU2Hr1G114960.14 , HORVU2Hr1G114960.16 , HORVU2Hr1G114960.9 , HORVU2Hr1G114960.8 , HORVU2Hr1G114960.5 , HORVU2Hr1G114960.4 , HORVU2Hr1G114960.7 , HORVU2Hr1G114960.6 , HORVU2Hr1G114960.1 , HORVU2Hr1G114960.3 , HORVU2Hr1G114960.2 , HORVU5Hr1G002110.57 , HORVU3Hr1G033140.10 , HORVU5Hr1G002110.55 , HORVU5Hr1G002110.53 , HORVU3Hr1G033140.12 , HORVU3Hr1G033140.13 , HORVU5Hr1G077680.3 , HORVU5Hr1G002110.48 , HORVU5Hr1G002110.45 , HORVU5Hr1G002110.47 , HORVU5Hr1G002110.40 , HORVU5Hr1G002110.42 , HORVU5Hr1G086120.6 , HORVU5Hr1G086120.7 , HORVU5Hr1G086120.4 , HORVU5Hr1G086120.5 , HORVU5Hr1G086120.2 , HORVU5Hr1G086120.3 , HORVU5Hr1G086120.1 , HORVU3Hr1G033140.11 , HORVU5Hr1G086120.8 , HORVU5Hr1G086120.9 , HORVU6Hr1G016670.1 , HORVU6Hr1G016670.2 , HORVU6Hr1G016670.3 , HORVU6Hr1G016670.4 , HORVU5Hr1G086120.18 , HORVU5Hr1G086120.19 , HORVU5Hr1G086120.14 , HORVU5Hr1G086120.15 , HORVU5Hr1G086120.16 , HORVU5Hr1G086120.17 , HORVU5Hr1G086120.10 , HORVU5Hr1G086120.11 , HORVU5Hr1G086120.12 , HORVU5Hr1G086120.13 , HORVU5Hr1G002110.64 , HORVU5Hr1G002110.63 , HORVU5Hr1G002110.61 , HORVU5Hr1G002110.3 , HORVU5Hr1G002110.2 , HORVU5Hr1G002110.7 , HORVU5Hr1G002110.9 , HORVU5Hr1G002110.8 , HORVU5Hr1G002110.12 , HORVU5Hr1G002110.17 , HORVU5Hr1G086120.21 , HORVU5Hr1G086120.20 , HORVU5Hr1G086120.23 , HORVU5Hr1G086120.22 , HORVU5Hr1G086120.25 , HORVU5Hr1G086120.24 , HORVU5Hr1G086120.27 , HORVU5Hr1G086120.26 , HORVU5Hr1G086120.29 , HORVU5Hr1G086120.28 , HORVU5Hr1G086120.32 , HORVU5Hr1G086120.30 , HORVU5Hr1G086120.31 , HORVU3Hr1G033140.6 , HORVU3Hr1G033140.4 , HORVU3Hr1G033140.2 , HORVU3Hr1G033140.3 , HORVU3Hr1G033140.1 , HORVU3Hr1G033140.8 , HORVU3Hr1G033140.9 , HORVU5Hr1G002110.35 , HORVU5Hr1G002110.37 , HORVU5Hr1G002110.31 , HORVU5Hr1G002110.39 , HORVU4Hr1G051980.9 , HORVU4Hr1G051980.8 , HORVU4Hr1G051980.1 , HORVU4Hr1G051980.3 , HORVU4Hr1G051980.2 , HORVU4Hr1G051980.5 , HORVU4Hr1G051980.4 , HORVU4Hr1G051980.7 , HORVU4Hr1G051980.6
Wheat TraesCS4A02G128400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G500400 kinesin motor domain containing protein, expressed -
2 Sobic.002G177800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
4 Sobic.009G083800 MYB family transcription factor, putative, expressed -
5 Sobic.001G323400 expressed protein -
6 Sobic.009G084400 transporter family protein, putative, expressed -
7 Sobic.007G127550 - -
8 Sobic.004G184101 - -
9 Sobic.002G310300 - -
10 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
11 Sobic.002G381400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
12 Sobic.002G197000 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
13 Sobic.001G362500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
14 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
15 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
16 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
17 Sobic.002G281600 protein of unknown function domain containing protein, expressed -
18 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
19 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
20 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G388700 Sobic001G388700 Sobic001G500400 Sobic001G500400 Sobic001G388700--Sobic001G500400 Sobic002G177800 Sobic002G177800 Sobic001G388700--Sobic002G177800 Sobic010G042600 Sobic010G042600 Sobic001G388700--Sobic010G042600 Sobic009G083800 Sobic009G083800 Sobic001G388700--Sobic009G083800 Sobic001G323400 Sobic001G323400 Sobic001G388700--Sobic001G323400 Sobic009G084400 Sobic009G084400 Sobic001G388700--Sobic009G084400 Sobic007G127550 Sobic007G127550 Sobic001G388700--Sobic007G127550 Sobic004G184101 Sobic004G184101 Sobic001G388700--Sobic004G184101 Sobic002G310300 Sobic002G310300 Sobic001G388700--Sobic002G310300 Sobic001G500400--Sobic002G310300 Sobic003G118100 Sobic003G118100 Sobic001G500400--Sobic003G118100 Sobic010G051100 Sobic010G051100 Sobic001G500400--Sobic010G051100 Sobic001G500400--Sobic010G042600 Sobic006G035600 Sobic006G035600 Sobic001G500400--Sobic006G035600 Sobic004G053900 Sobic004G053900 Sobic001G500400--Sobic004G053900 Sobic002G297500 Sobic002G297500 Sobic001G500400--Sobic002G297500 Sobic001G109700 Sobic001G109700 Sobic001G500400--Sobic001G109700 Sobic004G032900 Sobic004G032900 Sobic001G500400--Sobic004G032900 Sobic002G178000 Sobic002G178000 Sobic002G177800--Sobic002G178000 Sobic002G177800--Sobic009G084400 Sobic002G274600 Sobic002G274600 Sobic002G177800--Sobic002G274600 Sobic008G037900 Sobic008G037900 Sobic002G177800--Sobic008G037900 Sobic001G454900 Sobic001G454900 Sobic002G177800--Sobic001G454900 Sobic002G197000 Sobic002G197000 Sobic002G177800--Sobic002G197000 Sobic006G085700 Sobic006G085700 Sobic002G177800--Sobic006G085700 Sobic001G327200 Sobic001G327200 Sobic002G177800--Sobic001G327200 Sobic005G119900 Sobic005G119900 Sobic002G177800--Sobic005G119900 Sobic010G042600--Sobic003G118100 Sobic009G206500 Sobic009G206500 Sobic010G042600--Sobic009G206500 Sobic001G144200 Sobic001G144200 Sobic010G042600--Sobic001G144200 Sobic006G267500 Sobic006G267500 Sobic010G042600--Sobic006G267500 Sobic003G266400 Sobic003G266400 Sobic010G042600--Sobic003G266400 Sobic010G018500 Sobic010G018500 Sobic010G042600--Sobic010G018500 Sobic001G196000 Sobic001G196000 Sobic010G042600--Sobic001G196000 Sobic010G042600--Sobic006G035600 Sobic010G042600--Sobic001G500400 Sobic002G070300 Sobic002G070300 Sobic009G083800--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic009G083800--Sobic008G132200 Sobic007G048700 Sobic007G048700 Sobic009G083800--Sobic007G048700 Sobic003G169900 Sobic003G169900 Sobic009G083800--Sobic003G169900 Sobic003G236800 Sobic003G236800 Sobic009G083800--Sobic003G236800 Sobic001G458800 Sobic001G458800 Sobic009G083800--Sobic001G458800 Sobic001G392200 Sobic001G392200 Sobic009G083800--Sobic001G392200 Sobic002G055200 Sobic002G055200 Sobic009G083800--Sobic002G055200 Sobic003G196200 Sobic003G196200 Sobic009G083800--Sobic003G196200 Sobic001G126800 Sobic001G126800 Sobic001G323400--Sobic001G126800 Sobic003G159700 Sobic003G159700 Sobic001G323400--Sobic003G159700 Sobic006G095000 Sobic006G095000 Sobic001G323400--Sobic006G095000 Sobic002G308000 Sobic002G308000 Sobic001G323400--Sobic002G308000 Sobic002G192900 Sobic002G192900 Sobic001G323400--Sobic002G192900 Sobic004G064600 Sobic004G064600 Sobic001G323400--Sobic004G064600 Sobic010G269800 Sobic010G269800 Sobic001G323400--Sobic010G269800 Sobic002G390800 Sobic002G390800 Sobic001G323400--Sobic002G390800 Sobic001G011000 Sobic001G011000 Sobic001G323400--Sobic001G011000 Sobic009G084400--Sobic002G197000 Sobic002G029500 Sobic002G029500 Sobic009G084400--Sobic002G029500 Sobic010G213600 Sobic010G213600 Sobic009G084400--Sobic010G213600 Sobic009G084400--Sobic002G274600 Sobic002G391300 Sobic002G391300 Sobic009G084400--Sobic002G391300 Sobic005G134200 Sobic005G134200 Sobic009G084400--Sobic005G134200 Sobic005G226400 Sobic005G226400 Sobic009G084400--Sobic005G226400 Sobic006G092100 Sobic006G092100 Sobic009G084400--Sobic006G092100 Sobic006G171100 Sobic006G171100 Sobic009G084400--Sobic006G171100 Sobic008G023300 Sobic008G023300 Sobic007G127550--Sobic008G023300 Sobic007G127500 Sobic007G127500 Sobic007G127550--Sobic007G127500 Sobic010G089600 Sobic010G089600 Sobic007G127550--Sobic010G089600 Sobic007G127550--Sobic004G184101 Sobic001G213666 Sobic001G213666 Sobic007G127550--Sobic001G213666 Sobic002G381400 Sobic002G381400 Sobic007G127550--Sobic002G381400 Sobic004G035400 Sobic004G035400 Sobic007G127550--Sobic004G035400 Sobic010G189432 Sobic010G189432 Sobic007G127550--Sobic010G189432 Sobic006G256000 Sobic006G256000 Sobic007G127550--Sobic006G256000 Sobic004G184101--Sobic007G127550 Sobic004G184101--Sobic008G023300 Sobic004G184101--Sobic010G089600 Sobic003G187700 Sobic003G187700 Sobic004G184101--Sobic003G187700 Sobic004G184101--Sobic010G189432 Sobic004G184101--Sobic002G381400 Sobic002G096300 Sobic002G096300 Sobic004G184101--Sobic002G096300 Sobic004G184101--Sobic001G213666 Sobic004G184101--Sobic007G127500 Sobic002G310300--Sobic001G500400 Sobic002G310300--Sobic003G118100 Sobic002G310300--Sobic001G323400 Sobic002G310300--Sobic002G297500 Sobic002G310300--Sobic004G053900 Sobic002G310300--Sobic006G035600 Sobic002G310300--Sobic010G042600 Sobic002G310300--Sobic010G269800 Sobic002G310300--Sobic010G051100
Octagon: transcription factors


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