Gene annotation
Transcriptome id Sobic.009G083800.1
Synonym MYB3R1, Sb09g007380, PC-MYB1, ATMYB3R-1, MYB3R-1, ATMYB3R1
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6P7E4
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF608
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32730 : Homeodomain-like protein
RAP-DB (Rice) LOC_Os01g12860.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a043247
Brachypodium KQK06986 , KQK06987 , KQK06985 , PNT71601 , PNT71602 , PNT71603
Barley HORVU1Hr1G029540.30 , HORVU1Hr1G029540.22 , HORVU1Hr1G029540.23 , HORVU1Hr1G029540.20 , HORVU1Hr1G029540.21 , HORVU1Hr1G029540.26 , HORVU1Hr1G029540.27 , HORVU1Hr1G029540.24 , HORVU1Hr1G029540.25 , HORVU1Hr1G029540.28 , HORVU1Hr1G029540.29 , HORVU1Hr1G029540.19 , HORVU1Hr1G029540.18 , HORVU1Hr1G029540.13 , HORVU1Hr1G029540.12 , HORVU1Hr1G029540.11 , HORVU1Hr1G029540.10 , HORVU1Hr1G029540.17 , HORVU1Hr1G029540.16 , HORVU1Hr1G029540.15 , HORVU1Hr1G029540.6 , HORVU1Hr1G029540.9 , HORVU1Hr1G029540.8 , HORVU1Hr1G029540.2 , HORVU1Hr1G029540.1 , HORVU1Hr1G029540.7 , HORVU1Hr1G029540.5
Wheat TraesCS3D02G161100 , TraesCS3B02G180300 , TraesCS3D02G161100 , TraesCS1A02G129300 , TraesCS1D02G125400 , TraesCS1B02G147800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G070300 expressed protein -
2 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
4 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
5 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
6 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
7 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
8 Sobic.002G055200 GTP binding protein, putative, expressed -
9 Sobic.003G196200 elongation factor TS family protein, expressed -
10 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
11 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
12 Sobic.001G387800 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
13 Sobic.002G281600 protein of unknown function domain containing protein, expressed -
14 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
15 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
16 Sobic.008G102600 expressed protein -
17 Sobic.001G000400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pleiotropic drug resistance protein, putative, expressed -
18 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
19 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
20 Sobic.006G259401 - K06130: lysophospholipase II


Gene co-expression network
sample Sobic009G083800 Sobic009G083800 Sobic002G070300 Sobic002G070300 Sobic009G083800--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic009G083800--Sobic008G132200 Sobic007G048700 Sobic007G048700 Sobic009G083800--Sobic007G048700 Sobic003G169900 Sobic003G169900 Sobic009G083800--Sobic003G169900 Sobic003G236800 Sobic003G236800 Sobic009G083800--Sobic003G236800 Sobic001G458800 Sobic001G458800 Sobic009G083800--Sobic001G458800 Sobic001G392200 Sobic001G392200 Sobic009G083800--Sobic001G392200 Sobic002G055200 Sobic002G055200 Sobic009G083800--Sobic002G055200 Sobic003G196200 Sobic003G196200 Sobic009G083800--Sobic003G196200 Sobic002G070300--Sobic008G132200 Sobic007G118500 Sobic007G118500 Sobic002G070300--Sobic007G118500 Sobic001G543400 Sobic001G543400 Sobic002G070300--Sobic001G543400 Sobic003G260600 Sobic003G260600 Sobic002G070300--Sobic003G260600 Sobic001G011000 Sobic001G011000 Sobic002G070300--Sobic001G011000 Sobic003G159700 Sobic003G159700 Sobic002G070300--Sobic003G159700 Sobic002G154800 Sobic002G154800 Sobic002G070300--Sobic002G154800 Sobic001G378800 Sobic001G378800 Sobic002G070300--Sobic001G378800 Sobic002G153000 Sobic002G153000 Sobic002G070300--Sobic002G153000 Sobic008G132200--Sobic002G070300 Sobic008G132200--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic008G132200--Sobic002G255400 Sobic003G372200 Sobic003G372200 Sobic008G132200--Sobic003G372200 Sobic001G385000 Sobic001G385000 Sobic008G132200--Sobic001G385000 Sobic002G167100 Sobic002G167100 Sobic008G132200--Sobic002G167100 Sobic008G132200--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic008G132200--Sobic006G232800 Sobic010G253200 Sobic010G253200 Sobic008G132200--Sobic010G253200 Sobic003G167000 Sobic003G167000 Sobic007G048700--Sobic003G167000 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic001G347700 Sobic001G347700 Sobic007G048700--Sobic001G347700 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic001G013200 Sobic001G013200 Sobic007G048700--Sobic001G013200 Sobic008G113600 Sobic008G113600 Sobic003G169900--Sobic008G113600 Sobic001G338400 Sobic001G338400 Sobic003G169900--Sobic001G338400 Sobic008G150300 Sobic008G150300 Sobic003G169900--Sobic008G150300 Sobic003G169900--Sobic001G458800 Sobic001G077900 Sobic001G077900 Sobic003G169900--Sobic001G077900 Sobic003G169900--Sobic003G196200 Sobic008G072200 Sobic008G072200 Sobic003G169900--Sobic008G072200 Sobic001G458700 Sobic001G458700 Sobic003G169900--Sobic001G458700 Sobic003G348800 Sobic003G348800 Sobic003G169900--Sobic003G348800 Sobic006G259401 Sobic006G259401 Sobic003G236800--Sobic006G259401 Sobic003G045600 Sobic003G045600 Sobic003G236800--Sobic003G045600 Sobic002G117600 Sobic002G117600 Sobic003G236800--Sobic002G117600 Sobic002G408800 Sobic002G408800 Sobic003G236800--Sobic002G408800 Sobic007G120800 Sobic007G120800 Sobic003G236800--Sobic007G120800 Sobic007G119800 Sobic007G119800 Sobic003G236800--Sobic007G119800 Sobic008G151500 Sobic008G151500 Sobic003G236800--Sobic008G151500 Sobic007G179900 Sobic007G179900 Sobic003G236800--Sobic007G179900 Sobic001G380600 Sobic001G380600 Sobic003G236800--Sobic001G380600 Sobic003G034900 Sobic003G034900 Sobic001G458800--Sobic003G034900 Sobic009G224400 Sobic009G224400 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G115700 Sobic001G115700 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G073600 Sobic001G073600 Sobic001G458800--Sobic001G073600 Sobic002G186300 Sobic002G186300 Sobic001G458800--Sobic002G186300 Sobic002G395000 Sobic002G395000 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic001G392200--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G392200--Sobic009G041800 Sobic002G232400 Sobic002G232400 Sobic001G392200--Sobic002G232400 Sobic001G392200--Sobic001G011000 Sobic001G392200--Sobic002G153000 Sobic010G101600 Sobic010G101600 Sobic001G392200--Sobic010G101600 Sobic002G101300 Sobic002G101300 Sobic001G392200--Sobic002G101300 Sobic004G218600 Sobic004G218600 Sobic001G392200--Sobic004G218600 Sobic002G186900 Sobic002G186900 Sobic001G392200--Sobic002G186900 SobicK043400 SobicK043400 Sobic002G055200--SobicK043400 Sobic001G188900 Sobic001G188900 Sobic002G055200--Sobic001G188900 Sobic001G047600 Sobic001G047600 Sobic002G055200--Sobic001G047600 Sobic002G055200--Sobic009G083800 Sobic002G055200--Sobic002G117600 Sobic002G055200--Sobic003G236800 Sobic007G127500 Sobic007G127500 Sobic002G055200--Sobic007G127500 Sobic004G130400 Sobic004G130400 Sobic002G055200--Sobic004G130400 Sobic002G055200--Sobic003G034900 Sobic001G387800 Sobic001G387800 Sobic003G196200--Sobic001G387800 Sobic008G102600 Sobic008G102600 Sobic003G196200--Sobic008G102600 Sobic003G196200--Sobic001G077900 Sobic004G045300 Sobic004G045300 Sobic003G196200--Sobic004G045300 Sobic001G161700 Sobic001G161700 Sobic003G196200--Sobic001G161700 Sobic001G178500 Sobic001G178500 Sobic003G196200--Sobic001G178500 Sobic008G110500 Sobic008G110500 Sobic003G196200--Sobic008G110500 Sobic004G000100 Sobic004G000100 Sobic003G196200--Sobic004G000100 Sobic001G473800 Sobic001G473800 Sobic003G196200--Sobic001G473800
Octagon: transcription factors


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