Gene annotation
Transcriptome id Sobic.004G184101.1
Synonym -
Functional annotation -
UniProt A0A1Z5RNZ3
Pfam PF03242
Panther DB PTHR33509 PTHR33509:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT4G02380 : senescence-associated gene 21
RAP-DB (Rice) LOC_Os02g35650.1 : late embryogenesis abundant protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G127550 - -
2 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
3 Sobic.010G089600 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@trehalose phosphatase, putative, expressed K01087: trehalose 6-phosphate phosphatase
4 Sobic.003G187700 polygalacturonase, putative, expressed -
5 Sobic.010G189432 - -
6 Sobic.002G381400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
7 Sobic.002G096300 kinase, pfkB family, putative, expressed -
8 Sobic.001G213666 - -
9 Sobic.007G127500 - -
10 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
11 Sobic.006G256000 - -
12 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
13 Sobic.001G342101 - -
14 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
15 Sobic.008G055600 OsFBX430 - F-box domain containing protein, expressed -
16 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
17 Sobic.009G119600 powdery mildew resistant protein 5, putative, expressed -
18 Sobic.003G348100 white-brown complex homolog protein, putative, expressed -
19 Sobic.010G250300 ANTH/ENTH domain containing protein, putative, expressed -
20 Sobic.001G350100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@RING-H2 finger protein ATL5H precursor, putative, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55


Gene co-expression network
sample Sobic004G184101 Sobic004G184101 Sobic007G127550 Sobic007G127550 Sobic004G184101--Sobic007G127550 Sobic008G023300 Sobic008G023300 Sobic004G184101--Sobic008G023300 Sobic010G089600 Sobic010G089600 Sobic004G184101--Sobic010G089600 Sobic003G187700 Sobic003G187700 Sobic004G184101--Sobic003G187700 Sobic010G189432 Sobic010G189432 Sobic004G184101--Sobic010G189432 Sobic002G381400 Sobic002G381400 Sobic004G184101--Sobic002G381400 Sobic002G096300 Sobic002G096300 Sobic004G184101--Sobic002G096300 Sobic001G213666 Sobic001G213666 Sobic004G184101--Sobic001G213666 Sobic007G127500 Sobic007G127500 Sobic004G184101--Sobic007G127500 Sobic007G127550--Sobic008G023300 Sobic007G127550--Sobic007G127500 Sobic007G127550--Sobic010G089600 Sobic007G127550--Sobic004G184101 Sobic007G127550--Sobic001G213666 Sobic007G127550--Sobic002G381400 Sobic004G035400 Sobic004G035400 Sobic007G127550--Sobic004G035400 Sobic007G127550--Sobic010G189432 Sobic006G256000 Sobic006G256000 Sobic007G127550--Sobic006G256000 Sobic008G023300--Sobic007G127500 Sobic008G023300--Sobic007G127550 Sobic008G023300--Sobic010G089600 Sobic008G023300--Sobic004G184101 Sobic008G023300--Sobic002G381400 Sobic008G023300--Sobic001G213666 Sobic008G023300--Sobic004G035400 Sobic010G250300 Sobic010G250300 Sobic008G023300--Sobic010G250300 Sobic008G023300--Sobic003G187700 Sobic010G089600--Sobic008G023300 Sobic010G089600--Sobic004G035400 Sobic010G089600--Sobic007G127500 Sobic010G089600--Sobic003G187700 Sobic010G089600--Sobic010G189432 Sobic010G089600--Sobic001G213666 Sobic004G253200 Sobic004G253200 Sobic010G089600--Sobic004G253200 Sobic010G089600--Sobic007G127550 Sobic010G089600--Sobic004G184101 Sobic003G187700--Sobic004G253200 Sobic008G055600 Sobic008G055600 Sobic003G187700--Sobic008G055600 Sobic003G187700--Sobic010G189432 Sobic001G342101 Sobic001G342101 Sobic003G187700--Sobic001G342101 Sobic009G119600 Sobic009G119600 Sobic003G187700--Sobic009G119600 Sobic003G187700--Sobic001G213666 Sobic005G144000 Sobic005G144000 Sobic003G187700--Sobic005G144000 Sobic004G120500 Sobic004G120500 Sobic003G187700--Sobic004G120500 Sobic001G279000 Sobic001G279000 Sobic003G187700--Sobic001G279000 Sobic010G189432--Sobic004G253200 Sobic010G189432--Sobic008G055600 Sobic010G189432--Sobic003G187700 Sobic010G189432--Sobic009G119600 Sobic010G189432--Sobic001G213666 Sobic010G189432--Sobic001G342101 Sobic010G189432--Sobic004G120500 Sobic001G400000 Sobic001G400000 Sobic010G189432--Sobic001G400000 Sobic009G087100 Sobic009G087100 Sobic010G189432--Sobic009G087100 Sobic002G381400--Sobic008G023300 Sobic002G381400--Sobic004G035400 Sobic002G381400--Sobic010G089600 Sobic002G381400--Sobic004G184101 Sobic002G381400--Sobic007G127550 Sobic001G140000 Sobic001G140000 Sobic002G381400--Sobic001G140000 Sobic002G381400--Sobic010G189432 Sobic002G381400--Sobic001G213666 Sobic004G261800 Sobic004G261800 Sobic002G381400--Sobic004G261800 Sobic002G096300--Sobic010G189432 Sobic002G096300--Sobic010G089600 Sobic002G096300--Sobic009G119600 Sobic002G096300--Sobic004G253200 Sobic002G096300--Sobic003G187700 Sobic002G096300--Sobic001G342101 Sobic002G096300--Sobic008G055600 Sobic002G096300--Sobic004G184101 Sobic002G096300--Sobic001G213666 Sobic001G213666--Sobic003G187700 Sobic001G213666--Sobic004G253200 Sobic001G213666--Sobic010G189432 Sobic001G213666--Sobic008G055600 Sobic001G213666--Sobic001G342101 Sobic001G213666--Sobic006G256000 Sobic001G213666--Sobic004G120500 Sobic001G213666--Sobic009G119600 Sobic001G213666--Sobic001G400000 Sobic007G127500--Sobic008G023300 Sobic007G127500--Sobic010G089600 Sobic007G127500--Sobic007G127550 Sobic007G127500--Sobic010G250300 Sobic007G127500--Sobic003G187700 Sobic007G127500--Sobic001G213666 Sobic007G127500--Sobic006G256000 Sobic007G127500--Sobic001G342101 Sobic007G127500--Sobic010G189432
Octagon: transcription factors


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