Gene annotation
Transcriptome id Sobic.003G348100.1
Synonym Sb03g039110
Functional annotation white-brown complex homolog protein, putative, expressed
UniProt C5XP26
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF241
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G55090 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os01g61940.1 : white-brown complex homolog protein, putative, expressed
MaizeGDB (Corn) Zm00025a038219 , Zm00025a026953 , Zm00025a001906 , Zm00025a039705 , Zm00025a040796
Brachypodium KQK10473 , KQK22254 , KQK22252
Barley HORVU7Hr1G090350.4 , HORVU7Hr1G090350.5 , HORVU7Hr1G090350.6 , HORVU7Hr1G090350.7 , HORVU7Hr1G090350.2 , HORVU7Hr1G090350.3 , HORVU4Hr1G058160.1 , HORVU4Hr1G058160.2 , HORVU5Hr1G021120.1 , HORVU5Hr1G021120.2 , HORVU0Hr1G007130.2 , HORVU0Hr1G007130.1 , HORVU1Hr1G009920.3 , HORVU1Hr1G009920.2 , HORVU4Hr1G058070.4 , HORVU4Hr1G058070.2 , HORVU4Hr1G058070.3 , HORVU4Hr1G058070.1 , HORVU3Hr1G087130.1 , HORVU3Hr1G087130.2
Wheat TraesCS1A02G049600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
2 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
3 Sobic.008G055600 OsFBX430 - F-box domain containing protein, expressed -
4 Sobic.008G120920 - -
5 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
7 Sobic.003G441000 rhoGAP domain containing protein, expressed -
8 Sobic.010G189432 - -
9 Sobic.004G046800 expressed protein -
10 Sobic.004G007400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
11 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.001G342101 - -
13 Sobic.005G050400 syntaxin 6, putative, expressed -
14 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.003G187700 polygalacturonase, putative, expressed -
16 Sobic.009G087100 cyclin-A1, putative, expressed K06627: cyclin-A
17 Sobic.004G298200 Plant VAMP (vesicle-associated membrane protein) family protein(PubMedID : 26465154)@MSP domain containing protein, expressed -
18 Sobic.005G136100 - -
19 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
20 Sobic.005G072600 expressed protein -


Gene co-expression network
sample Sobic003G348100 Sobic003G348100 Sobic001G400000 Sobic001G400000 Sobic003G348100--Sobic001G400000 Sobic004G253200 Sobic004G253200 Sobic003G348100--Sobic004G253200 Sobic008G055600 Sobic008G055600 Sobic003G348100--Sobic008G055600 Sobic008G120920 Sobic008G120920 Sobic003G348100--Sobic008G120920 Sobic001G112600 Sobic001G112600 Sobic003G348100--Sobic001G112600 Sobic003G244400 Sobic003G244400 Sobic003G348100--Sobic003G244400 Sobic003G441000 Sobic003G441000 Sobic003G348100--Sobic003G441000 Sobic010G189432 Sobic010G189432 Sobic003G348100--Sobic010G189432 Sobic004G046800 Sobic004G046800 Sobic003G348100--Sobic004G046800 Sobic004G113600 Sobic004G113600 Sobic001G400000--Sobic004G113600 Sobic001G400000--Sobic001G112600 Sobic001G384200 Sobic001G384200 Sobic001G400000--Sobic001G384200 Sobic005G050400 Sobic005G050400 Sobic001G400000--Sobic005G050400 Sobic001G400000--Sobic003G244400 Sobic006G265800 Sobic006G265800 Sobic001G400000--Sobic006G265800 Sobic004G007400 Sobic004G007400 Sobic001G400000--Sobic004G007400 Sobic001G400000--Sobic008G055600 Sobic008G156600 Sobic008G156600 Sobic001G400000--Sobic008G156600 Sobic004G253200--Sobic008G055600 Sobic003G187700 Sobic003G187700 Sobic004G253200--Sobic003G187700 Sobic009G119600 Sobic009G119600 Sobic004G253200--Sobic009G119600 Sobic004G253200--Sobic010G189432 Sobic004G120500 Sobic004G120500 Sobic004G253200--Sobic004G120500 Sobic001G342101 Sobic001G342101 Sobic004G253200--Sobic001G342101 Sobic005G144000 Sobic005G144000 Sobic004G253200--Sobic005G144000 Sobic001G213666 Sobic001G213666 Sobic004G253200--Sobic001G213666 Sobic001G279000 Sobic001G279000 Sobic004G253200--Sobic001G279000 Sobic008G055600--Sobic004G253200 Sobic008G055600--Sobic001G279000 Sobic008G055600--Sobic005G144000 Sobic008G055600--Sobic009G119600 Sobic008G055600--Sobic001G342101 Sobic008G055600--Sobic003G187700 Sobic008G055600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic008G055600--Sobic004G358000 Sobic008G055600--Sobic003G441000 Sobic002G111100 Sobic002G111100 Sobic008G120920--Sobic002G111100 Sobic008G055200 Sobic008G055200 Sobic008G120920--Sobic008G055200 Sobic008G120920--Sobic004G046800 Sobic005G002100 Sobic005G002100 Sobic008G120920--Sobic005G002100 Sobic008G120920--Sobic003G244400 Sobic005G136100 Sobic005G136100 Sobic008G120920--Sobic005G136100 Sobic001G103100 Sobic001G103100 Sobic008G120920--Sobic001G103100 Sobic003G290500 Sobic003G290500 Sobic008G120920--Sobic003G290500 Sobic008G120920--Sobic004G358000 Sobic001G112600--Sobic005G050400 Sobic009G242200 Sobic009G242200 Sobic001G112600--Sobic009G242200 Sobic001G112600--Sobic003G441000 Sobic002G170100 Sobic002G170100 Sobic001G112600--Sobic002G170100 Sobic001G414650 Sobic001G414650 Sobic001G112600--Sobic001G414650 Sobic001G112600--Sobic003G244400 Sobic001G112600--Sobic008G055200 Sobic001G112600--Sobic004G358000 Sobic001G112600--Sobic005G144000 Sobic001G370400 Sobic001G370400 Sobic003G244400--Sobic001G370400 Sobic003G244400--Sobic001G103100 Sobic003G244400--Sobic008G055200 Sobic001G432200 Sobic001G432200 Sobic003G244400--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic003G244400--Sobic006G204500 Sobic001G340800 Sobic001G340800 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G244400--Sobic010G003200 Sobic003G441000--Sobic005G144000 Sobic003G441000--Sobic001G112600 Sobic003G441000--Sobic002G170100 Sobic003G441000--Sobic009G242200 Sobic003G441000--Sobic001G279000 Sobic003G441000--Sobic004G358000 Sobic003G441000--Sobic003G290500 Sobic003G441000--Sobic008G055200 Sobic005G170400 Sobic005G170400 Sobic003G441000--Sobic005G170400 Sobic010G189432--Sobic004G253200 Sobic010G189432--Sobic008G055600 Sobic010G189432--Sobic003G187700 Sobic010G189432--Sobic009G119600 Sobic010G189432--Sobic001G213666 Sobic010G189432--Sobic001G342101 Sobic010G189432--Sobic004G120500 Sobic010G189432--Sobic001G400000 Sobic009G087100 Sobic009G087100 Sobic010G189432--Sobic009G087100 Sobic004G046800--Sobic008G055200 Sobic001G194800 Sobic001G194800 Sobic004G046800--Sobic001G194800 Sobic001G106800 Sobic001G106800 Sobic004G046800--Sobic001G106800 Sobic002G192800 Sobic002G192800 Sobic004G046800--Sobic002G192800 Sobic004G046800--Sobic008G120920 Sobic008G029800 Sobic008G029800 Sobic004G046800--Sobic008G029800 Sobic010G124900 Sobic010G124900 Sobic004G046800--Sobic010G124900 Sobic001G117100 Sobic001G117100 Sobic004G046800--Sobic001G117100 Sobic008G030501 Sobic008G030501 Sobic004G046800--Sobic008G030501
Octagon: transcription factors


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