Gene annotation
Transcriptome id Sobic.001G362500.1
Synonym Sb01g034610
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter family protein, putative, expressed
UniProt A0A1B6QN07
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF62
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G18840 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os03g24870.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002594
Brachypodium KQK21587
Barley -
Wheat TraesCS5A02G293500 , TraesCS5D02G300800 , TraesCS5B02G292600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G189200 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.004G094000 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
3 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
4 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
5 Sobic.009G084400 transporter family protein, putative, expressed -
6 Sobic.010G063900 AP2 domain containing protein, expressed -
7 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
8 Sobic.007G020700 ACT domain containing protein, expressed -
9 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
10 Sobic.007G167400 gibberellin 20 oxidase 2, putative, expressed -
11 Sobic.003G199900 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
12 Sobic.002G177800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G388700 expressed protein -
14 Sobic.007G214500 sucrose transporters(PubMedID : 23805151)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@sucrose transporter BoSUT1, putative, expressed K15378: solute carrier family 45, member 1/2/4
15 Sobic.001G258600 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
17 Sobic.005G018200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside-triphosphatase, putative, expressed K14641: apyrase
18 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
19 Sobic.004G009300 expressed protein -
20 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic001G362500 Sobic001G362500 Sobic001G189200 Sobic001G189200 Sobic001G362500--Sobic001G189200 Sobic004G094000 Sobic004G094000 Sobic001G362500--Sobic004G094000 Sobic010G045400 Sobic010G045400 Sobic001G362500--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic001G362500--Sobic008G037900 Sobic009G084400 Sobic009G084400 Sobic001G362500--Sobic009G084400 Sobic010G063900 Sobic010G063900 Sobic001G362500--Sobic010G063900 Sobic003G269900 Sobic003G269900 Sobic001G362500--Sobic003G269900 Sobic007G020700 Sobic007G020700 Sobic001G362500--Sobic007G020700 Sobic001G365200 Sobic001G365200 Sobic001G362500--Sobic001G365200 Sobic005G079100 Sobic005G079100 Sobic001G189200--Sobic005G079100 Sobic005G134200 Sobic005G134200 Sobic001G189200--Sobic005G134200 Sobic004G008600 Sobic004G008600 Sobic001G189200--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic001G189200--Sobic010G269000 Sobic003G046700 Sobic003G046700 Sobic001G189200--Sobic003G046700 Sobic005G216500 Sobic005G216500 Sobic001G189200--Sobic005G216500 Sobic005G067300 Sobic005G067300 Sobic001G189200--Sobic005G067300 Sobic002G076700 Sobic002G076700 Sobic001G189200--Sobic002G076700 Sobic007G094100 Sobic007G094100 Sobic001G189200--Sobic007G094100 Sobic004G126500 Sobic004G126500 Sobic004G094000--Sobic004G126500 Sobic007G106500 Sobic007G106500 Sobic004G094000--Sobic007G106500 Sobic001G238500 Sobic001G238500 Sobic004G094000--Sobic001G238500 Sobic004G094000--Sobic007G020700 Sobic005G104200 Sobic005G104200 Sobic004G094000--Sobic005G104200 Sobic004G156250 Sobic004G156250 Sobic004G094000--Sobic004G156250 Sobic002G082700 Sobic002G082700 Sobic004G094000--Sobic002G082700 Sobic006G009700 Sobic006G009700 Sobic004G094000--Sobic006G009700 Sobic010G115000 Sobic010G115000 Sobic004G094000--Sobic010G115000 Sobic010G045400--Sobic008G037900 Sobic003G017601 Sobic003G017601 Sobic010G045400--Sobic003G017601 Sobic003G368000 Sobic003G368000 Sobic010G045400--Sobic003G368000 Sobic004G161900 Sobic004G161900 Sobic010G045400--Sobic004G161900 Sobic006G230300 Sobic006G230300 Sobic010G045400--Sobic006G230300 Sobic001G299100 Sobic001G299100 Sobic010G045400--Sobic001G299100 Sobic008G191400 Sobic008G191400 Sobic010G045400--Sobic008G191400 Sobic001G218500 Sobic001G218500 Sobic010G045400--Sobic001G218500 Sobic010G213600 Sobic010G213600 Sobic010G045400--Sobic010G213600 Sobic010G097200 Sobic010G097200 Sobic008G037900--Sobic010G097200 Sobic007G220400 Sobic007G220400 Sobic008G037900--Sobic007G220400 Sobic006G205700 Sobic006G205700 Sobic008G037900--Sobic006G205700 Sobic002G111900 Sobic002G111900 Sobic008G037900--Sobic002G111900 Sobic010G241900 Sobic010G241900 Sobic008G037900--Sobic010G241900 Sobic009G065700 Sobic009G065700 Sobic008G037900--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic008G037900--Sobic003G441800 Sobic003G167300 Sobic003G167300 Sobic008G037900--Sobic003G167300 Sobic002G391400 Sobic002G391400 Sobic008G037900--Sobic002G391400 Sobic002G197000 Sobic002G197000 Sobic009G084400--Sobic002G197000 Sobic002G029500 Sobic002G029500 Sobic009G084400--Sobic002G029500 Sobic009G084400--Sobic010G213600 Sobic002G274600 Sobic002G274600 Sobic009G084400--Sobic002G274600 Sobic002G391300 Sobic002G391300 Sobic009G084400--Sobic002G391300 Sobic009G084400--Sobic005G134200 Sobic005G226400 Sobic005G226400 Sobic009G084400--Sobic005G226400 Sobic006G092100 Sobic006G092100 Sobic009G084400--Sobic006G092100 Sobic006G171100 Sobic006G171100 Sobic009G084400--Sobic006G171100 Sobic002G085800 Sobic002G085800 Sobic010G063900--Sobic002G085800 Sobic009G098000 Sobic009G098000 Sobic010G063900--Sobic009G098000 Sobic003G176300 Sobic003G176300 Sobic010G063900--Sobic003G176300 Sobic010G066800 Sobic010G066800 Sobic010G063900--Sobic010G066800 Sobic010G241800 Sobic010G241800 Sobic010G063900--Sobic010G241800 Sobic003G426500 Sobic003G426500 Sobic010G063900--Sobic003G426500 Sobic002G068000 Sobic002G068000 Sobic010G063900--Sobic002G068000 Sobic005G216700 Sobic005G216700 Sobic010G063900--Sobic005G216700 Sobic003G182200 Sobic003G182200 Sobic010G063900--Sobic003G182200 Sobic002G118900 Sobic002G118900 Sobic003G269900--Sobic002G118900 Sobic003G269900--Sobic010G115000 Sobic010G139100 Sobic010G139100 Sobic003G269900--Sobic010G139100 Sobic009G032900 Sobic009G032900 Sobic003G269900--Sobic009G032900 Sobic003G269900--Sobic005G216500 Sobic002G115600 Sobic002G115600 Sobic003G269900--Sobic002G115600 Sobic010G158400 Sobic010G158400 Sobic003G269900--Sobic010G158400 Sobic003G269900--Sobic005G216700 Sobic003G185300 Sobic003G185300 Sobic003G269900--Sobic003G185300 Sobic002G029600 Sobic002G029600 Sobic007G020700--Sobic002G029600 Sobic005G071900 Sobic005G071900 Sobic007G020700--Sobic005G071900 Sobic007G020700--Sobic006G009700 Sobic004G312500 Sobic004G312500 Sobic007G020700--Sobic004G312500 Sobic009G060700 Sobic009G060700 Sobic007G020700--Sobic009G060700 Sobic002G019100 Sobic002G019100 Sobic007G020700--Sobic002G019100 Sobic006G108300 Sobic006G108300 Sobic007G020700--Sobic006G108300 Sobic009G079900 Sobic009G079900 Sobic007G020700--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic007G020700--Sobic003G079100 Sobic001G365200--Sobic004G161900 Sobic001G365200--Sobic003G368000 Sobic002G383900 Sobic002G383900 Sobic001G365200--Sobic002G383900 Sobic003G105000 Sobic003G105000 Sobic001G365200--Sobic003G105000 Sobic005G022500 Sobic005G022500 Sobic001G365200--Sobic005G022500 Sobic001G365200--Sobic010G045400 Sobic007G119500 Sobic007G119500 Sobic001G365200--Sobic007G119500 Sobic006G000600 Sobic006G000600 Sobic001G365200--Sobic006G000600 Sobic001G365200--Sobic008G037900
Octagon: transcription factors


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