Gene annotation
Transcriptome id Sobic.003G199900.1,Sobic.003G199900.3,Sobic.003G199900.2
Synonym Sb03g026220
Functional annotation aminotransferase, classes I and II, domain containing protein, expressed
UniProt A0A1W0VY65 , A0A1W0VY80 , A0A1W0VY74
Pfam PF01212
Panther DB PTHR11751 PTHR11751:SF437
NCBI CDD KOG0257; Kynurenine aminotransferase, glutamine transaminase K
KEGG Orthology K00815; tyrosine aminotransferase
Gene Ontology GO:0016829; lyase activity GO:0006520cellular amino acid metabolic process


Orthologs (automatic annotation)
TAIR AT5G36160 : Tyrosine transaminase family protein
RAP-DB (Rice) LOC_Os02g19924.1 : aminotransferase, classes I and II, domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3D02G331700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G135500 glyoxal oxidase-related, putative, expressed -
2 Sobic.001G238100 expansin precursor, putative, expressed -
3 Sobic.004G009300 expressed protein -
4 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
5 Sobic.003G046700 expressed protein -
6 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.002G392300 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
9 Sobic.009G018300 vrga1, putative, expressed -
10 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
11 Sobic.007G214500 sucrose transporters(PubMedID : 23805151)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@sucrose transporter BoSUT1, putative, expressed K15378: solute carrier family 45, member 1/2/4
12 Sobic.007G094100 OsWAK108 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.006G171300 expansin precursor, putative, expressed -
14 Sobic.010G115000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@limonoid UDP-glucosyltransferase, putative, expressed -
15 Sobic.007G020200 expansin precursor, putative, expressed -
16 Sobic.002G392200 peroxidase precursor, putative, expressed -
17 Sobic.003G269900 OsSub12 - Putative Subtilisin homologue, expressed -
18 Sobic.007G019900 expansin precursor, putative, expressed -
19 Sobic.002G085800 cytokinin-N-glucosyltransferase 1, putative, expressed -
20 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic003G199900 Sobic003G199900 Sobic006G135500 Sobic006G135500 Sobic003G199900--Sobic006G135500 Sobic001G238100 Sobic001G238100 Sobic003G199900--Sobic001G238100 Sobic004G009300 Sobic004G009300 Sobic003G199900--Sobic004G009300 Sobic010G139100 Sobic010G139100 Sobic003G199900--Sobic010G139100 Sobic003G046700 Sobic003G046700 Sobic003G199900--Sobic003G046700 Sobic009G032900 Sobic009G032900 Sobic003G199900--Sobic009G032900 Sobic002G392300 Sobic002G392300 Sobic003G199900--Sobic002G392300 Sobic002G334000 Sobic002G334000 Sobic003G199900--Sobic002G334000 Sobic009G018300 Sobic009G018300 Sobic003G199900--Sobic009G018300 Sobic006G135500--Sobic001G238100 Sobic007G019900 Sobic007G019900 Sobic006G135500--Sobic007G019900 Sobic006G135500--Sobic010G139100 Sobic006G135500--Sobic004G009300 Sobic006G135500--Sobic002G392300 Sobic006G135500--Sobic003G046700 Sobic006G135500--Sobic002G334000 Sobic006G135500--Sobic009G032900 Sobic005G226200 Sobic005G226200 Sobic006G135500--Sobic005G226200 Sobic001G238100--Sobic002G334000 Sobic001G238100--Sobic003G046700 Sobic001G238100--Sobic006G135500 Sobic007G206800 Sobic007G206800 Sobic001G238100--Sobic007G206800 Sobic001G499900 Sobic001G499900 Sobic001G238100--Sobic001G499900 Sobic001G238100--Sobic009G032900 Sobic001G506100 Sobic001G506100 Sobic001G238100--Sobic001G506100 Sobic007G220400 Sobic007G220400 Sobic001G238100--Sobic007G220400 Sobic002G392100 Sobic002G392100 Sobic001G238100--Sobic002G392100 Sobic004G009300--Sobic009G018300 Sobic004G009300--Sobic002G392300 Sobic007G094100 Sobic007G094100 Sobic004G009300--Sobic007G094100 Sobic004G337950 Sobic004G337950 Sobic004G009300--Sobic004G337950 Sobic004G009300--Sobic006G135500 Sobic004G009300--Sobic003G046700 Sobic004G119900 Sobic004G119900 Sobic004G009300--Sobic004G119900 Sobic001G233100 Sobic001G233100 Sobic004G009300--Sobic001G233100 Sobic001G521600 Sobic001G521600 Sobic004G009300--Sobic001G521600 Sobic010G139100--Sobic009G032900 Sobic004G351200 Sobic004G351200 Sobic010G139100--Sobic004G351200 Sobic003G269900 Sobic003G269900 Sobic010G139100--Sobic003G269900 Sobic005G216700 Sobic005G216700 Sobic010G139100--Sobic005G216700 Sobic010G139100--Sobic006G135500 Sobic004G323000 Sobic004G323000 Sobic010G139100--Sobic004G323000 Sobic010G115000 Sobic010G115000 Sobic010G139100--Sobic010G115000 Sobic010G174100 Sobic010G174100 Sobic010G139100--Sobic010G174100 Sobic010G158400 Sobic010G158400 Sobic010G139100--Sobic010G158400 Sobic003G046700--Sobic002G334000 Sobic010G269000 Sobic010G269000 Sobic003G046700--Sobic010G269000 Sobic004G008600 Sobic004G008600 Sobic003G046700--Sobic004G008600 Sobic005G216500 Sobic005G216500 Sobic003G046700--Sobic005G216500 Sobic005G226350 Sobic005G226350 Sobic003G046700--Sobic005G226350 Sobic003G046700--Sobic007G220400 Sobic010G191700 Sobic010G191700 Sobic003G046700--Sobic010G191700 Sobic003G046700--Sobic009G018300 Sobic010G241900 Sobic010G241900 Sobic003G046700--Sobic010G241900 Sobic002G068000 Sobic002G068000 Sobic009G032900--Sobic002G068000 Sobic009G032900--Sobic004G351200 Sobic009G032900--Sobic005G216700 Sobic009G032900--Sobic010G158400 Sobic009G032900--Sobic002G334000 Sobic009G032900--Sobic010G139100 Sobic009G032900--Sobic007G206800 Sobic009G032900--Sobic003G046700 Sobic009G032900--Sobic003G269900 Sobic002G392200 Sobic002G392200 Sobic002G392300--Sobic002G392200 Sobic002G392300--Sobic004G009300 Sobic002G392300--Sobic006G135500 Sobic003G425701 Sobic003G425701 Sobic002G392300--Sobic003G425701 Sobic006G171300 Sobic006G171300 Sobic002G392300--Sobic006G171300 Sobic002G392300--Sobic004G337950 Sobic002G392300--Sobic007G094100 Sobic002G392300--Sobic009G018300 Sobic006G178300 Sobic006G178300 Sobic002G392300--Sobic006G178300 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic002G334000--Sobic001G238100 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300 Sobic007G097550 Sobic007G097550 Sobic009G018300--Sobic007G097550 Sobic009G018300--Sobic001G233100 Sobic009G018300--Sobic001G506100 Sobic009G004900 Sobic009G004900 Sobic009G018300--Sobic009G004900 Sobic009G018300--Sobic003G046700 Sobic009G018300--Sobic001G521600 Sobic009G018300--Sobic004G337950 Sobic009G018300--Sobic004G009300 Sobic009G018300--Sobic010G269000
Octagon: transcription factors


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