Gene annotation
Transcriptome id Sobic.007G020200.1
Synonym Sb07g001750, ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5YME0
Pfam PF01357 PF03330
Panther DB PTHR31867:SF14 PTHR31867
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g06050.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027043 , Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a040298 , Zm00025a040299 , Zm00025a040297 , Zm00025a006809 , Zm00025a055602 , Zm00025a040300
Brachypodium KQJ96857
Barley HORVU5Hr1G121370.2 , HORVU5Hr1G121370.1 , HORVU4Hr1G072440.1 , HORVU4Hr1G072580.3 , HORVU7Hr1G092600.3 , HORVU4Hr1G072410.1 , HORVU4Hr1G072580.4 , HORVU5Hr1G119860.1 , HORVU5Hr1G119860.2 , HORVU4Hr1G072400.1 , HORVU4Hr1G072580.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU4Hr1G072580.1 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU7Hr1G092600.6 , HORVU7Hr1G092600.7
Wheat TraesCS4B02G272600 , TraesCS4B02G271200 , TraesCS4D02G270500 , TraesCS5B02G528500 , TraesCS4B02G271100 , TraesCS4B02G271300 , TraesCS4D02G271800 , TraesCS4B02G272700 , TraesCS4B02G272800 , TraesCS5D02G527700 , TraesCS1B02G156700 , TraesCS5B02G528400 , TraesCS4D02G271900 , TraesCS4A02G034300 , TraesCS1A02G406900 , TraesCS4D02G271700 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4A02G032600 , TraesCS4D02G270400 , TraesCS3D02G176000 , TraesCS3B02G200100 , TraesCS4A02G345000 , TraesCS3A02G165600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238100 expansin precursor, putative, expressed -
2 Sobic.001G506100 Leucine-rich repeat transmembrane protein kinase("PubMedID : 26759170,PubMedID : 24597475")@receptor-like protein kinase 2 precursor, putative, expressed -
3 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G068000 expressed protein -
5 Sobic.008G145900 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
6 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
7 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
8 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
9 Sobic.001G499900 expansin precursor, putative, expressed -
10 Sobic.004G009300 expressed protein -
11 Sobic.003G046700 expressed protein -
12 Sobic.001G414800 dirigent, putative, expressed -
13 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
14 Sobic.009G018300 vrga1, putative, expressed -
15 Sobic.010G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
16 Sobic.005G226350 - -
17 Sobic.001G233100 - -
18 Sobic.010G241800 - -
19 Sobic.006G135500 glyoxal oxidase-related, putative, expressed -
20 Sobic.010G112500 - -


Gene co-expression network
sample Sobic007G020200 Sobic007G020200 Sobic001G238100 Sobic001G238100 Sobic007G020200--Sobic001G238100 Sobic001G506100 Sobic001G506100 Sobic007G020200--Sobic001G506100 Sobic009G032900 Sobic009G032900 Sobic007G020200--Sobic009G032900 Sobic002G068000 Sobic002G068000 Sobic007G020200--Sobic002G068000 Sobic008G145900 Sobic008G145900 Sobic007G020200--Sobic008G145900 Sobic002G334000 Sobic002G334000 Sobic007G020200--Sobic002G334000 Sobic007G220400 Sobic007G220400 Sobic007G020200--Sobic007G220400 Sobic005G080600 Sobic005G080600 Sobic007G020200--Sobic005G080600 Sobic001G499900 Sobic001G499900 Sobic007G020200--Sobic001G499900 Sobic001G238100--Sobic002G334000 Sobic003G046700 Sobic003G046700 Sobic001G238100--Sobic003G046700 Sobic006G135500 Sobic006G135500 Sobic001G238100--Sobic006G135500 Sobic007G206800 Sobic007G206800 Sobic001G238100--Sobic007G206800 Sobic001G238100--Sobic001G499900 Sobic001G238100--Sobic009G032900 Sobic001G238100--Sobic001G506100 Sobic001G238100--Sobic007G220400 Sobic002G392100 Sobic002G392100 Sobic001G238100--Sobic002G392100 Sobic009G018300 Sobic009G018300 Sobic001G506100--Sobic009G018300 Sobic001G233100 Sobic001G233100 Sobic001G506100--Sobic001G233100 Sobic010G128300 Sobic010G128300 Sobic001G506100--Sobic010G128300 Sobic009G004900 Sobic009G004900 Sobic001G506100--Sobic009G004900 Sobic002G392000 Sobic002G392000 Sobic001G506100--Sobic002G392000 Sobic007G097550 Sobic007G097550 Sobic001G506100--Sobic007G097550 Sobic005G205400 Sobic005G205400 Sobic001G506100--Sobic005G205400 Sobic005G226200 Sobic005G226200 Sobic001G506100--Sobic005G226200 Sobic005G226400 Sobic005G226400 Sobic001G506100--Sobic005G226400 Sobic009G032900--Sobic002G068000 Sobic004G351200 Sobic004G351200 Sobic009G032900--Sobic004G351200 Sobic005G216700 Sobic005G216700 Sobic009G032900--Sobic005G216700 Sobic010G158400 Sobic010G158400 Sobic009G032900--Sobic010G158400 Sobic009G032900--Sobic002G334000 Sobic010G139100 Sobic010G139100 Sobic009G032900--Sobic010G139100 Sobic009G032900--Sobic007G206800 Sobic009G032900--Sobic003G046700 Sobic003G269900 Sobic003G269900 Sobic009G032900--Sobic003G269900 Sobic002G068000--Sobic009G032900 Sobic003G349400 Sobic003G349400 Sobic002G068000--Sobic003G349400 Sobic002G068000--Sobic010G158400 Sobic010G234500 Sobic010G234500 Sobic002G068000--Sobic010G234500 Sobic002G068000--Sobic005G080600 Sobic009G259800 Sobic009G259800 Sobic002G068000--Sobic009G259800 Sobic003G426500 Sobic003G426500 Sobic002G068000--Sobic003G426500 Sobic002G068000--Sobic005G216700 Sobic010G066800 Sobic010G066800 Sobic002G068000--Sobic010G066800 Sobic007G019900 Sobic007G019900 Sobic008G145900--Sobic007G019900 Sobic008G145900--Sobic002G068000 Sobic008G145900--Sobic009G032900 Sobic008G145900--Sobic001G238100 Sobic008G145900--Sobic003G349400 Sobic008G145900--Sobic007G020200 Sobic008G145900--Sobic010G139100 Sobic008G145900--Sobic006G135500 Sobic008G145900--Sobic005G216700 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic010G191700 Sobic010G191700 Sobic002G334000--Sobic010G191700 Sobic002G391400 Sobic002G391400 Sobic002G334000--Sobic002G391400 Sobic010G241900 Sobic010G241900 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic002G334000--Sobic001G238100 Sobic005G226350 Sobic005G226350 Sobic002G334000--Sobic005G226350 Sobic002G334000--Sobic010G128300 Sobic007G220400--Sobic010G241900 Sobic007G220400--Sobic010G191700 Sobic007G220400--Sobic007G206800 Sobic002G111900 Sobic002G111900 Sobic007G220400--Sobic002G111900 Sobic007G220400--Sobic005G226350 Sobic007G220400--Sobic002G391400 Sobic005G134200 Sobic005G134200 Sobic007G220400--Sobic005G134200 Sobic007G220400--Sobic010G128300 Sobic007G220400--Sobic002G334000 Sobic005G080600--Sobic007G206800 Sobic006G196400 Sobic006G196400 Sobic005G080600--Sobic006G196400 Sobic005G080600--Sobic007G220400 Sobic005G080600--Sobic002G391400 Sobic005G080600--Sobic009G259800 Sobic004G119800 Sobic004G119800 Sobic005G080600--Sobic004G119800 Sobic005G080600--Sobic002G334000 Sobic005G080600--Sobic002G068000 Sobic005G080600--Sobic010G241900 Sobic003G167300 Sobic003G167300 Sobic001G499900--Sobic003G167300 Sobic001G499900--Sobic002G392000 Sobic001G499900--Sobic010G241900 Sobic001G499900--Sobic007G220400 Sobic008G022100 Sobic008G022100 Sobic001G499900--Sobic008G022100 Sobic001G499900--Sobic007G206800 Sobic001G499900--Sobic010G191700 Sobic009G065700 Sobic009G065700 Sobic001G499900--Sobic009G065700 Sobic006G047200 Sobic006G047200 Sobic001G499900--Sobic006G047200
Octagon: transcription factors


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