Gene annotation
Transcriptome id Sobic.010G112500.1
Synonym
Functional annotation -
UniProt A0A194YIG9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G127800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.007G020200 expansin precursor, putative, expressed -
3 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
4 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
5 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
6 Sobic.001G238100 expansin precursor, putative, expressed -
7 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
8 Sobic.005G067300 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
9 Sobic.010G241800 - -
10 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
11 Sobic.009G079200 expressed protein -
12 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G216500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulin, putative, expressed K07192: flotillin
14 Sobic.008G099232 - -
15 Sobic.003G046700 expressed protein -
16 Sobic.002G068000 expressed protein -
17 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
18 Sobic.001G414800 dirigent, putative, expressed -
19 Sobic.005G226350 - -
20 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic010G112500 Sobic010G112500 Sobic010G127800 Sobic010G127800 Sobic010G112500--Sobic010G127800 Sobic007G020200 Sobic007G020200 Sobic010G112500--Sobic007G020200 Sobic005G216700 Sobic005G216700 Sobic010G112500--Sobic005G216700 Sobic004G351200 Sobic004G351200 Sobic010G112500--Sobic004G351200 Sobic005G080600 Sobic005G080600 Sobic010G112500--Sobic005G080600 Sobic001G238100 Sobic001G238100 Sobic010G112500--Sobic001G238100 Sobic002G334000 Sobic002G334000 Sobic010G112500--Sobic002G334000 Sobic005G067300 Sobic005G067300 Sobic010G112500--Sobic005G067300 Sobic010G241800 Sobic010G241800 Sobic010G112500--Sobic010G241800 Sobic005G127400 Sobic005G127400 Sobic010G127800--Sobic005G127400 Sobic006G150100 Sobic006G150100 Sobic010G127800--Sobic006G150100 Sobic010G127800--Sobic004G351200 Sobic006G103300 Sobic006G103300 Sobic010G127800--Sobic006G103300 Sobic006G225500 Sobic006G225500 Sobic010G127800--Sobic006G225500 Sobic003G349400 Sobic003G349400 Sobic010G127800--Sobic003G349400 Sobic001G318300 Sobic001G318300 Sobic010G127800--Sobic001G318300 Sobic009G186500 Sobic009G186500 Sobic010G127800--Sobic009G186500 Sobic002G329200 Sobic002G329200 Sobic010G127800--Sobic002G329200 Sobic007G020200--Sobic001G238100 Sobic001G506100 Sobic001G506100 Sobic007G020200--Sobic001G506100 Sobic009G032900 Sobic009G032900 Sobic007G020200--Sobic009G032900 Sobic002G068000 Sobic002G068000 Sobic007G020200--Sobic002G068000 Sobic008G145900 Sobic008G145900 Sobic007G020200--Sobic008G145900 Sobic007G020200--Sobic002G334000 Sobic007G220400 Sobic007G220400 Sobic007G020200--Sobic007G220400 Sobic007G020200--Sobic005G080600 Sobic001G499900 Sobic001G499900 Sobic007G020200--Sobic001G499900 Sobic005G216700--Sobic004G351200 Sobic005G216700--Sobic009G032900 Sobic010G139100 Sobic010G139100 Sobic005G216700--Sobic010G139100 Sobic005G216700--Sobic002G068000 Sobic005G216700--Sobic002G334000 Sobic007G206800 Sobic007G206800 Sobic005G216700--Sobic007G206800 Sobic010G158400 Sobic010G158400 Sobic005G216700--Sobic010G158400 Sobic005G216700--Sobic005G080600 Sobic003G046700 Sobic003G046700 Sobic005G216700--Sobic003G046700 Sobic004G351200--Sobic005G216700 Sobic004G351200--Sobic009G032900 Sobic004G351200--Sobic010G139100 Sobic004G351200--Sobic002G334000 Sobic004G351200--Sobic002G068000 Sobic004G351200--Sobic010G158400 Sobic004G351200--Sobic007G206800 Sobic002G392100 Sobic002G392100 Sobic004G351200--Sobic002G392100 Sobic004G351200--Sobic006G150100 Sobic005G080600--Sobic007G206800 Sobic006G196400 Sobic006G196400 Sobic005G080600--Sobic006G196400 Sobic005G080600--Sobic007G220400 Sobic002G391400 Sobic002G391400 Sobic005G080600--Sobic002G391400 Sobic009G259800 Sobic009G259800 Sobic005G080600--Sobic009G259800 Sobic004G119800 Sobic004G119800 Sobic005G080600--Sobic004G119800 Sobic005G080600--Sobic002G334000 Sobic005G080600--Sobic002G068000 Sobic010G241900 Sobic010G241900 Sobic005G080600--Sobic010G241900 Sobic001G238100--Sobic002G334000 Sobic001G238100--Sobic003G046700 Sobic006G135500 Sobic006G135500 Sobic001G238100--Sobic006G135500 Sobic001G238100--Sobic007G206800 Sobic001G238100--Sobic001G499900 Sobic001G238100--Sobic009G032900 Sobic001G238100--Sobic001G506100 Sobic001G238100--Sobic007G220400 Sobic001G238100--Sobic002G392100 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic010G191700 Sobic010G191700 Sobic002G334000--Sobic010G191700 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic002G334000--Sobic001G238100 Sobic005G226350 Sobic005G226350 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300 Sobic005G079100 Sobic005G079100 Sobic005G067300--Sobic005G079100 Sobic010G168400 Sobic010G168400 Sobic005G067300--Sobic010G168400 Sobic002G195600 Sobic002G195600 Sobic005G067300--Sobic002G195600 Sobic005G067300--Sobic006G196400 Sobic005G067300--Sobic009G032900 Sobic005G067300--Sobic005G080600 Sobic002G118900 Sobic002G118900 Sobic005G067300--Sobic002G118900 Sobic005G067300--Sobic004G351200 Sobic003G269900 Sobic003G269900 Sobic005G067300--Sobic003G269900 Sobic001G209300 Sobic001G209300 Sobic010G241800--Sobic001G209300 Sobic003G182200 Sobic003G182200 Sobic010G241800--Sobic003G182200 Sobic010G241800--Sobic010G168400 Sobic007G100700 Sobic007G100700 Sobic010G241800--Sobic007G100700 Sobic010G241800--Sobic004G119800 Sobic003G426500 Sobic003G426500 Sobic010G241800--Sobic003G426500 Sobic010G241800--Sobic002G068000 Sobic008G011700 Sobic008G011700 Sobic010G241800--Sobic008G011700 Sobic003G064800 Sobic003G064800 Sobic010G241800--Sobic003G064800
Octagon: transcription factors


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