Gene annotation
Transcriptome id Sobic.010G127800.1
Synonym Sb10g011200
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5Z964
Pfam PF07690
Panther DB PTHR11654 PTHR11654:SF160
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G68570 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g33960.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a043686 , Zm00025a043684 , Zm00025a043685 , Zm00025a050396
Brachypodium PNT71265 , KQK18670 , KQK06278 , KQK06279 , KQK06270 , KQK06271 , KQK06277
Barley HORVU7Hr1G042120.1 , HORVU7Hr1G042120.2 , HORVU7Hr1G042120.3 , HORVU7Hr1G042120.4 , HORVU7Hr1G042120.6 , HORVU7Hr1G042120.7 , HORVU7Hr1G042120.8 , HORVU7Hr1G042120.9 , HORVU1Hr1G063460.2 , HORVU1Hr1G063460.3 , HORVU1Hr1G063460.1 , HORVU1Hr1G063420.6 , HORVU1Hr1G063420.7 , HORVU1Hr1G063420.5 , HORVU1Hr1G063420.2 , HORVU1Hr1G063420.3 , HORVU1Hr1G063420.1
Wheat TraesCS1B02G267900 , TraesCS1D02G256700 , TraesCS7D02G209200 , TraesCS1D02G257100 , TraesCS1B02G268200 , TraesCS1A02G257400 , TraesCS7A02G206400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G127400 expressed protein -
2 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
3 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.006G103300 wound/stress protein, putative, expressed -
5 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.003G349400 expressed protein -
7 Sobic.001G318300 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.002G329200 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.006G100501 - -
11 Sobic.001G414800 dirigent, putative, expressed -
12 Sobic.001G238100 expansin precursor, putative, expressed -
13 Sobic.003G064800 dirigent, putative, expressed -
14 Sobic.003G132400 OsSubt1 - Putative Subtilisin homologue, expressed -
15 Sobic.010G112500 - -
16 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
17 Sobic.002G068000 expressed protein -
18 Sobic.008G016000 major facilitator superfamily antiporter, putative, expressed -
19 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
20 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic010G127800 Sobic010G127800 Sobic005G127400 Sobic005G127400 Sobic010G127800--Sobic005G127400 Sobic006G150100 Sobic006G150100 Sobic010G127800--Sobic006G150100 Sobic004G351200 Sobic004G351200 Sobic010G127800--Sobic004G351200 Sobic006G103300 Sobic006G103300 Sobic010G127800--Sobic006G103300 Sobic006G225500 Sobic006G225500 Sobic010G127800--Sobic006G225500 Sobic003G349400 Sobic003G349400 Sobic010G127800--Sobic003G349400 Sobic001G318300 Sobic001G318300 Sobic010G127800--Sobic001G318300 Sobic009G186500 Sobic009G186500 Sobic010G127800--Sobic009G186500 Sobic002G329200 Sobic002G329200 Sobic010G127800--Sobic002G329200 Sobic003G064800 Sobic003G064800 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic002G255000 Sobic002G255000 Sobic005G127400--Sobic002G255000 Sobic005G127400--Sobic006G150100 Sobic003G140700 Sobic003G140700 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic010G234500 Sobic010G234500 Sobic005G127400--Sobic010G234500 Sobic004G110700 Sobic004G110700 Sobic005G127400--Sobic004G110700 Sobic006G150100--Sobic003G349400 Sobic006G150100--Sobic005G127400 Sobic002G003700 Sobic002G003700 Sobic006G150100--Sobic002G003700 Sobic006G150100--Sobic004G110700 Sobic006G170600 Sobic006G170600 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G150100--Sobic006G225500 Sobic005G216700 Sobic005G216700 Sobic004G351200--Sobic005G216700 Sobic009G032900 Sobic009G032900 Sobic004G351200--Sobic009G032900 Sobic010G139100 Sobic010G139100 Sobic004G351200--Sobic010G139100 Sobic002G334000 Sobic002G334000 Sobic004G351200--Sobic002G334000 Sobic004G351200--Sobic002G068000 Sobic004G351200--Sobic010G158400 Sobic007G206800 Sobic007G206800 Sobic004G351200--Sobic007G206800 Sobic002G392100 Sobic002G392100 Sobic004G351200--Sobic002G392100 Sobic004G351200--Sobic006G150100 Sobic006G103300--Sobic005G127400 Sobic006G103300--Sobic006G225500 Sobic006G103300--Sobic009G186500 Sobic006G103300--Sobic003G064800 Sobic006G103300--Sobic003G140700 Sobic006G103300--Sobic010G234500 Sobic007G008600 Sobic007G008600 Sobic006G103300--Sobic007G008600 Sobic006G103300--Sobic004G110700 Sobic010G088800 Sobic010G088800 Sobic006G103300--Sobic010G088800 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic006G225500--Sobic007G008600 Sobic003G349400--Sobic005G127400 Sobic003G349400--Sobic010G234500 Sobic003G349400--Sobic002G068000 Sobic003G349400--Sobic006G150100 Sobic003G349400--Sobic002G255000 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic003G349400--Sobic004G110700 Sobic007G100700 Sobic007G100700 Sobic003G349400--Sobic007G100700 Sobic003G132400 Sobic003G132400 Sobic001G318300--Sobic003G132400 Sobic001G318300--Sobic002G329200 Sobic001G318300--Sobic005G127400 Sobic003G059000 Sobic003G059000 Sobic001G318300--Sobic003G059000 Sobic001G318300--Sobic006G150100 Sobic001G318300--Sobic006G225500 Sobic001G318300--Sobic003G349400 Sobic001G318300--Sobic006G170600 Sobic009G035900 Sobic009G035900 Sobic001G318300--Sobic009G035900 Sobic009G186500--Sobic006G225500 Sobic009G186500--Sobic002G255000 Sobic001G319300 Sobic001G319300 Sobic009G186500--Sobic001G319300 Sobic009G186500--Sobic005G127400 Sobic009G186500--Sobic010G234500 Sobic009G186500--Sobic003G064800 Sobic009G186500--Sobic003G140700 Sobic001G238200 Sobic001G238200 Sobic009G186500--Sobic001G238200 Sobic009G186500--Sobic003G349400 Sobic002G329200--Sobic001G318300 Sobic002G329200--Sobic003G132400 Sobic002G329200--Sobic006G170600 Sobic002G329200--Sobic006G150100 Sobic002G329200--Sobic003G059000 Sobic002G329200--Sobic002G003700 Sobic002G329200--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic002G329200--Sobic002G085900 Sobic002G329200--Sobic006G225500
Octagon: transcription factors


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