Gene annotation
Transcriptome id Sobic.001G340900.1
Synonym MYB3, ATMYB3, Sb01g032770
Functional annotation myb-like DNA-binding domain containing protein, putative, expressed
UniProt C5WWN5 , D3YJ42 , Q8W0U3
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF459
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22640 : myb domain protein 3
RAP-DB (Rice) LOC_Os03g29614.1 : myb-like DNA-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a028009 , Zm00025a038844 , Zm00025a042466 , Zm00025a047090 , Zm00025a025444 , Zm00025a013941 , Zm00025a004179
Brachypodium KQK00858 , KQJ95429 , KQK09222 , KQJ90159 , KQJ90325
Barley HORVU4Hr1G082610.1 , HORVU4Hr1G082610.4 , HORVU7Hr1G072450.2 , HORVU7Hr1G072450.3 , HORVU3Hr1G100500.2 , HORVU3Hr1G100500.1 , HORVU5Hr1G063410.3 , HORVU5Hr1G063410.2 , HORVU5Hr1G063410.1
Wheat TraesCS3B02G320800 , TraesCS1A02G406600 , TraesCS5D02G225800 , TraesCS3B02G515900 , TraesCS5A02G217900 , TraesCS3D02G286300 , TraesCS3D02G468400 , TraesCS7B02G204800 , TraesCS4D02G319700 , TraesCS5B02G216900 , TraesCS7D02G300000 , TraesCS7D02G300000 , TraesCS7A02G304500 , TraesCS5A02G495500 , TraesCS3B02G126800 , TraesCS4B02G323300
Populus PNT33043 , PNT33044 , PNT33045


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G118075 - -
2 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
3 Sobic.002G259301 - K15382: SLC50A, solute carrier family 50 (sugar transporter)
4 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
5 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
6 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
7 Sobic.009G152120 - -
8 Sobic.003G396500 ZOS5-12 - C2H2 zinc finger protein, expressed -
9 Sobic.007G038250 - -
10 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
11 Sobic.001G171001 - -
12 Sobic.003G356300 cadmium tolerance factor, putative, expressed -
13 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
14 Sobic.003G285700 ATP binding protein, putative, expressed -
15 Sobic.007G118050 - -
16 Sobic.005G212100 powdery mildew resistance protein PM3b, putative, expressed -
17 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
18 Sobic.006G246001 - -
19 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
20 Sobic.005G172700 expressed protein -


Gene co-expression network
sample Sobic001G340900 Sobic001G340900 Sobic007G118075 Sobic007G118075 Sobic001G340900--Sobic007G118075 Sobic002G299200 Sobic002G299200 Sobic001G340900--Sobic002G299200 Sobic002G259301 Sobic002G259301 Sobic001G340900--Sobic002G259301 Sobic003G090000 Sobic003G090000 Sobic001G340900--Sobic003G090000 Sobic003G044000 Sobic003G044000 Sobic001G340900--Sobic003G044000 Sobic001G288000 Sobic001G288000 Sobic001G340900--Sobic001G288000 Sobic009G152120 Sobic009G152120 Sobic001G340900--Sobic009G152120 Sobic003G396500 Sobic003G396500 Sobic001G340900--Sobic003G396500 Sobic007G038250 Sobic007G038250 Sobic001G340900--Sobic007G038250 Sobic007G118050 Sobic007G118050 Sobic007G118075--Sobic007G118050 Sobic002G108100 Sobic002G108100 Sobic007G118075--Sobic002G108100 Sobic005G123400 Sobic005G123400 Sobic007G118075--Sobic005G123400 Sobic007G118075--Sobic001G340900 Sobic006G237500 Sobic006G237500 Sobic007G118075--Sobic006G237500 Sobic004G353300 Sobic004G353300 Sobic007G118075--Sobic004G353300 Sobic001G433600 Sobic001G433600 Sobic007G118075--Sobic001G433600 Sobic010G237650 Sobic010G237650 Sobic007G118075--Sobic010G237650 Sobic002G147200 Sobic002G147200 Sobic007G118075--Sobic002G147200 Sobic003G027000 Sobic003G027000 Sobic002G299200--Sobic003G027000 Sobic002G299200--Sobic003G090000 Sobic002G299200--Sobic003G396500 Sobic002G299200--Sobic009G152120 Sobic001G218600 Sobic001G218600 Sobic002G299200--Sobic001G218600 Sobic006G215800 Sobic006G215800 Sobic002G299200--Sobic006G215800 Sobic002G299200--Sobic002G259301 Sobic002G299200--Sobic001G288000 Sobic005G070301 Sobic005G070301 Sobic002G299200--Sobic005G070301 Sobic002G259301--Sobic002G299200 Sobic003G142200 Sobic003G142200 Sobic002G259301--Sobic003G142200 Sobic007G193300 Sobic007G193300 Sobic002G259301--Sobic007G193300 Sobic005G164800 Sobic005G164800 Sobic002G259301--Sobic005G164800 Sobic002G259301--Sobic001G288000 Sobic007G205300 Sobic007G205300 Sobic002G259301--Sobic007G205300 Sobic001G287900 Sobic001G287900 Sobic002G259301--Sobic001G287900 Sobic003G217300 Sobic003G217300 Sobic002G259301--Sobic003G217300 Sobic002G259301--Sobic003G027000 Sobic003G090000--Sobic003G027000 Sobic003G090000--Sobic001G218600 Sobic003G090000--Sobic002G299200 Sobic003G090000--Sobic006G215800 Sobic003G090000--Sobic003G396500 Sobic004G313400 Sobic004G313400 Sobic003G090000--Sobic004G313400 Sobic003G090000--Sobic003G044000 Sobic003G090000--Sobic005G070301 Sobic010G157200 Sobic010G157200 Sobic003G090000--Sobic010G157200 Sobic003G044000--Sobic001G218600 Sobic003G044000--Sobic003G090000 Sobic003G044000--Sobic003G027000 Sobic001G506400 Sobic001G506400 Sobic003G044000--Sobic001G506400 Sobic001G131900 Sobic001G131900 Sobic003G044000--Sobic001G131900 Sobic003G044000--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic003G044000--Sobic009G066600 Sobic003G044000--Sobic004G313400 Sobic003G293400 Sobic003G293400 Sobic003G044000--Sobic003G293400 Sobic001G137400 Sobic001G137400 Sobic001G288000--Sobic001G137400 Sobic001G137500 Sobic001G137500 Sobic001G288000--Sobic001G137500 Sobic003G091300 Sobic003G091300 Sobic001G288000--Sobic003G091300 Sobic002G258000 Sobic002G258000 Sobic001G288000--Sobic002G258000 Sobic001G288000--Sobic007G193300 Sobic001G288000--Sobic002G299200 Sobic003G006000 Sobic003G006000 Sobic001G288000--Sobic003G006000 Sobic002G178700 Sobic002G178700 Sobic001G288000--Sobic002G178700 Sobic001G419500 Sobic001G419500 Sobic001G288000--Sobic001G419500 Sobic009G152120--Sobic002G299200 Sobic009G152120--Sobic003G027000 Sobic009G152120--Sobic003G090000 Sobic009G152120--Sobic001G218600 Sobic008G098700 Sobic008G098700 Sobic009G152120--Sobic008G098700 Sobic009G152120--Sobic003G044000 Sobic009G152120--Sobic003G396500 Sobic009G152120--Sobic006G215800 Sobic009G152120--Sobic010G157200 Sobic003G396500--Sobic001G218600 Sobic003G325600 Sobic003G325600 Sobic003G396500--Sobic003G325600 Sobic003G396500--Sobic003G090000 Sobic003G396500--Sobic002G299200 Sobic003G396500--Sobic003G027000 Sobic003G396500--Sobic006G215800 Sobic006G152700 Sobic006G152700 Sobic003G396500--Sobic006G152700 Sobic003G396500--Sobic005G070301 Sobic003G396500--Sobic004G313400 Sobic003G216600 Sobic003G216600 Sobic007G038250--Sobic003G216600 Sobic003G397100 Sobic003G397100 Sobic007G038250--Sobic003G397100 Sobic002G173400 Sobic002G173400 Sobic007G038250--Sobic002G173400 Sobic006G095000 Sobic006G095000 Sobic007G038250--Sobic006G095000 Sobic009G158900 Sobic009G158900 Sobic007G038250--Sobic009G158900 Sobic007G038250--Sobic001G340900 Sobic001G323900 Sobic001G323900 Sobic007G038250--Sobic001G323900 Sobic007G038250--Sobic007G118050 Sobic003G285700 Sobic003G285700 Sobic007G038250--Sobic003G285700
Octagon: transcription factors


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