Gene annotation
Transcriptome id Sobic.002G259301.1
Synonym -
Functional annotation -
UniProt A0A1W0W5R6
Pfam PF03083
Panther DB PTHR10791 PTHR10791:SF37
NCBI CDD KOG1623; Multitransmembrane protein
KEGG Orthology K15382; SLC50A, solute carrier family 50 (sugar transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50790 : Nodulin MtN3 family protein
RAP-DB (Rice) LOC_Os08g42350.1 : nodulin MtN3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a047592 , Zm00025a005293
Brachypodium KQJ90945 , KQJ88471 , KQJ99151
Barley HORVU6Hr1G000440.4 , HORVU6Hr1G000440.5 , HORVU6Hr1G000440.1 , HORVU6Hr1G000440.2 , HORVU6Hr1G000440.3 , HORVU5Hr1G076770.1 , HORVU5Hr1G076770.2 , HORVU5Hr1G076770.3 , HORVU5Hr1G076770.4 , HORVU5Hr1G076770.5 , HORVU5Hr1G076770.6 , HORVU1Hr1G010210.7 , HORVU1Hr1G010210.6 , HORVU1Hr1G010210.5 , HORVU1Hr1G010210.4 , HORVU1Hr1G010210.2 , HORVU1Hr1G010210.1 , HORVU7Hr1G054710.1 , HORVU7Hr1G054710.2
Wheat TraesCS5B02G288600 , TraesCS5A02G289200 , TraesCS6A02G009000 , TraesCS7B02G160000 , TraesCS1D02G052700 , TraesCS5D02G297100 , TraesCS7A02G261100 , TraesCS7D02G263100 , TraesCS1B02G066900 , TraesCS1A02G050400 , TraesCS6B02G015100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
2 Sobic.003G142200 integral membrane protein DUF6 containing protein, expressed -
3 Sobic.007G193300 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed -
4 Sobic.005G164800 pumilio-family RNA binding repeat domain containing protein, expressed -
5 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
6 Sobic.007G205300 AP2 domain containing protein, expressed -
7 Sobic.001G287900 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
8 Sobic.003G217300 zinc finger, C3HC4 type family protein, expressed -
9 Sobic.003G027000 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
10 Sobic.008G138200 RNA recognition motif family protein, expressed -
11 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.006G131100 - -
13 Sobic.004G218000 SET domain containing protein, expressed -
14 Sobic.009G152120 - -
15 Sobic.002G121900 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
16 Sobic.005G074600 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.003G274000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.004G048400 - -
19 Sobic.001G152901 "YABBY transcription factor, "(PubMedID : 22581231) -
20 Sobic.007G040500 - -


Gene co-expression network
sample Sobic002G259301 Sobic002G259301 Sobic002G299200 Sobic002G299200 Sobic002G259301--Sobic002G299200 Sobic003G142200 Sobic003G142200 Sobic002G259301--Sobic003G142200 Sobic007G193300 Sobic007G193300 Sobic002G259301--Sobic007G193300 Sobic005G164800 Sobic005G164800 Sobic002G259301--Sobic005G164800 Sobic001G288000 Sobic001G288000 Sobic002G259301--Sobic001G288000 Sobic007G205300 Sobic007G205300 Sobic002G259301--Sobic007G205300 Sobic001G287900 Sobic001G287900 Sobic002G259301--Sobic001G287900 Sobic003G217300 Sobic003G217300 Sobic002G259301--Sobic003G217300 Sobic003G027000 Sobic003G027000 Sobic002G259301--Sobic003G027000 Sobic002G299200--Sobic003G027000 Sobic003G090000 Sobic003G090000 Sobic002G299200--Sobic003G090000 Sobic003G396500 Sobic003G396500 Sobic002G299200--Sobic003G396500 Sobic009G152120 Sobic009G152120 Sobic002G299200--Sobic009G152120 Sobic001G218600 Sobic001G218600 Sobic002G299200--Sobic001G218600 Sobic006G215800 Sobic006G215800 Sobic002G299200--Sobic006G215800 Sobic002G299200--Sobic002G259301 Sobic002G299200--Sobic001G288000 Sobic005G070301 Sobic005G070301 Sobic002G299200--Sobic005G070301 Sobic003G142200--Sobic002G259301 Sobic007G191200 Sobic007G191200 Sobic003G142200--Sobic007G191200 Sobic003G142200--Sobic005G164800 Sobic009G125200 Sobic009G125200 Sobic003G142200--Sobic009G125200 Sobic003G238900 Sobic003G238900 Sobic003G142200--Sobic003G238900 Sobic003G443900 Sobic003G443900 Sobic003G142200--Sobic003G443900 Sobic009G210700 Sobic009G210700 Sobic003G142200--Sobic009G210700 Sobic006G139400 Sobic006G139400 Sobic003G142200--Sobic006G139400 Sobic003G142200--Sobic002G299200 Sobic001G137500 Sobic001G137500 Sobic007G193300--Sobic001G137500 Sobic001G216400 Sobic001G216400 Sobic007G193300--Sobic001G216400 Sobic001G419500 Sobic001G419500 Sobic007G193300--Sobic001G419500 Sobic005G166100 Sobic005G166100 Sobic007G193300--Sobic005G166100 Sobic003G381100 Sobic003G381100 Sobic007G193300--Sobic003G381100 Sobic007G128200 Sobic007G128200 Sobic007G193300--Sobic007G128200 Sobic004G234600 Sobic004G234600 Sobic007G193300--Sobic004G234600 Sobic001G457600 Sobic001G457600 Sobic007G193300--Sobic001G457600 Sobic002G121900 Sobic002G121900 Sobic007G193300--Sobic002G121900 Sobic005G164800--Sobic003G217300 Sobic004G218000 Sobic004G218000 Sobic005G164800--Sobic004G218000 Sobic001G171100 Sobic001G171100 Sobic005G164800--Sobic001G171100 Sobic001G377600 Sobic001G377600 Sobic005G164800--Sobic001G377600 Sobic010G067200 Sobic010G067200 Sobic005G164800--Sobic010G067200 Sobic003G027200 Sobic003G027200 Sobic005G164800--Sobic003G027200 Sobic005G164800--Sobic007G193300 Sobic008G072900 Sobic008G072900 Sobic005G164800--Sobic008G072900 Sobic005G164800--Sobic007G191200 Sobic001G137400 Sobic001G137400 Sobic001G288000--Sobic001G137400 Sobic001G288000--Sobic001G137500 Sobic003G091300 Sobic003G091300 Sobic001G288000--Sobic003G091300 Sobic002G258000 Sobic002G258000 Sobic001G288000--Sobic002G258000 Sobic001G288000--Sobic007G193300 Sobic001G288000--Sobic002G299200 Sobic003G006000 Sobic003G006000 Sobic001G288000--Sobic003G006000 Sobic002G178700 Sobic002G178700 Sobic001G288000--Sobic002G178700 Sobic001G288000--Sobic001G419500 Sobic005G133100 Sobic005G133100 Sobic007G205300--Sobic005G133100 Sobic002G089600 Sobic002G089600 Sobic007G205300--Sobic002G089600 Sobic004G198550 Sobic004G198550 Sobic007G205300--Sobic004G198550 Sobic007G040600 Sobic007G040600 Sobic007G205300--Sobic007G040600 Sobic005G082400 Sobic005G082400 Sobic007G205300--Sobic005G082400 Sobic005G221300 Sobic005G221300 Sobic007G205300--Sobic005G221300 Sobic009G039000 Sobic009G039000 Sobic007G205300--Sobic009G039000 Sobic005G147700 Sobic005G147700 Sobic007G205300--Sobic005G147700 Sobic004G048400 Sobic004G048400 Sobic007G205300--Sobic004G048400 Sobic010G118900 Sobic010G118900 Sobic001G287900--Sobic010G118900 Sobic007G217800 Sobic007G217800 Sobic001G287900--Sobic007G217800 Sobic001G287900--Sobic002G121900 Sobic008G138200 Sobic008G138200 Sobic001G287900--Sobic008G138200 Sobic008G031000 Sobic008G031000 Sobic001G287900--Sobic008G031000 Sobic003G274000 Sobic003G274000 Sobic001G287900--Sobic003G274000 Sobic001G152901 Sobic001G152901 Sobic001G287900--Sobic001G152901 Sobic003G044800 Sobic003G044800 Sobic001G287900--Sobic003G044800 Sobic007G043000 Sobic007G043000 Sobic001G287900--Sobic007G043000 Sobic003G217300--Sobic004G218000 Sobic003G217300--Sobic005G164800 Sobic007G056900 Sobic007G056900 Sobic003G217300--Sobic007G056900 Sobic003G217300--Sobic010G067200 Sobic005G041900 Sobic005G041900 Sobic003G217300--Sobic005G041900 Sobic009G042600 Sobic009G042600 Sobic003G217300--Sobic009G042600 Sobic003G217300--Sobic002G259301 Sobic002G221100 Sobic002G221100 Sobic003G217300--Sobic002G221100 Sobic003G217300--Sobic007G193300 Sobic003G027000--Sobic003G090000 Sobic003G027000--Sobic001G218600 Sobic003G027000--Sobic002G299200 Sobic003G027000--Sobic005G070301 Sobic004G313400 Sobic004G313400 Sobic003G027000--Sobic004G313400 Sobic003G027000--Sobic003G396500 Sobic003G027000--Sobic006G215800 Sobic003G044000 Sobic003G044000 Sobic003G027000--Sobic003G044000 Sobic003G027000--Sobic009G152120
Octagon: transcription factors


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