Gene annotation
Transcriptome id Sobic.006G223800.2,Sobic.006G223800.1,Sobic.006G223800.3
Synonym Sb06g029306
Functional annotation ZOS8-01 - C2H2 zinc finger protein, expressed
UniProt A0A1Z5RF53 , A0A1B6PNB5
Pfam PF12874
Panther DB PTHR23067 PTHR23067:SF43
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61190 : putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain
RAP-DB (Rice) LOC_Os08g16940.1 : ZOS8-01 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a030838
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G010900 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
2 Sobic.006G017600 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
3 Sobic.002G014200 OsFBX209 - F-box domain containing protein, expressed -
4 Sobic.005G110421 - -
5 Sobic.002G019500 OsFBX234 - F-box domain containing protein, expressed -
6 Sobic.002G019750 - -
7 Sobic.008G155600 ankyrin-1, putative, expressed -
8 Sobic.010G093400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Starch synthesis(PubMedID : 31624872)@Starch Synthase IIa(PubMedID : 21853065)@soluble starch synthase 2-3, chloroplast precursor, putative, expressed K00703: starch synthase
9 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
10 Sobic.006G199700 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
11 Sobic.004G101500 DNA binding protein, putative, expressed K10639: CCNB1IP1, E3 ubiquitin-protein ligase CCNP1IP1
12 Sobic.002G106000 OsFBD15 - F-box and FBD domain containing protein, expressed -
13 Sobic.001G215100 - -
14 Sobic.003G358200 reticulon domain containing protein, putative, expressed -
15 Sobic.003G304100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
16 Sobic.010G273800 "starch biosynthesis, 1,4-alpha-glucan branching enzyme"(PubMedID : 21853065)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
17 Sobic.007G116766 - -
18 Sobic.004G032600 - -
19 Sobic.010G090700 expressed protein -
20 Sobic.004G340100 PB1 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G223800 Sobic006G223800 Sobic008G010900 Sobic008G010900 Sobic006G223800--Sobic008G010900 Sobic006G017600 Sobic006G017600 Sobic006G223800--Sobic006G017600 Sobic002G014200 Sobic002G014200 Sobic006G223800--Sobic002G014200 Sobic005G110421 Sobic005G110421 Sobic006G223800--Sobic005G110421 Sobic002G019500 Sobic002G019500 Sobic006G223800--Sobic002G019500 Sobic002G019750 Sobic002G019750 Sobic006G223800--Sobic002G019750 Sobic008G155600 Sobic008G155600 Sobic006G223800--Sobic008G155600 Sobic010G093400 Sobic010G093400 Sobic006G223800--Sobic010G093400 Sobic001G112000 Sobic001G112000 Sobic006G223800--Sobic001G112000 Sobic008G010900--Sobic006G223800 Sobic008G010900--Sobic006G017600 Sobic008G010900--Sobic001G112000 Sobic006G199700 Sobic006G199700 Sobic008G010900--Sobic006G199700 Sobic004G101500 Sobic004G101500 Sobic008G010900--Sobic004G101500 Sobic002G342100 Sobic002G342100 Sobic008G010900--Sobic002G342100 Sobic003G409800 Sobic003G409800 Sobic008G010900--Sobic003G409800 Sobic008G010900--Sobic005G110421 Sobic010G090700 Sobic010G090700 Sobic008G010900--Sobic010G090700 Sobic006G017600--Sobic008G010900 Sobic006G017600--Sobic006G223800 Sobic005G202000 Sobic005G202000 Sobic006G017600--Sobic005G202000 Sobic006G017600--Sobic004G101500 Sobic006G017600--Sobic010G090700 Sobic004G040800 Sobic004G040800 Sobic006G017600--Sobic004G040800 Sobic001G152600 Sobic001G152600 Sobic006G017600--Sobic001G152600 Sobic008G098700 Sobic008G098700 Sobic006G017600--Sobic008G098700 Sobic006G181500 Sobic006G181500 Sobic006G017600--Sobic006G181500 Sobic002G014200--Sobic006G223800 Sobic002G014200--Sobic010G093400 Sobic002G014200--Sobic008G010900 Sobic007G095700 Sobic007G095700 Sobic002G014200--Sobic007G095700 Sobic002G419000 Sobic002G419000 Sobic002G014200--Sobic002G419000 Sobic002G014200--Sobic004G101500 Sobic006G222500 Sobic006G222500 Sobic002G014200--Sobic006G222500 Sobic007G116766 Sobic007G116766 Sobic002G014200--Sobic007G116766 Sobic002G014200--Sobic002G019750 Sobic003G281600 Sobic003G281600 Sobic005G110421--Sobic003G281600 Sobic005G110421--Sobic006G223800 Sobic003G197300 Sobic003G197300 Sobic005G110421--Sobic003G197300 Sobic001G510400 Sobic001G510400 Sobic005G110421--Sobic001G510400 Sobic003G358200 Sobic003G358200 Sobic005G110421--Sobic003G358200 Sobic005G110421--Sobic001G112000 Sobic005G110421--Sobic008G010900 Sobic002G185300 Sobic002G185300 Sobic005G110421--Sobic002G185300 Sobic005G110421--Sobic010G093400 Sobic002G019500--Sobic002G019750 Sobic002G019500--Sobic006G223800 Sobic002G019500--Sobic008G155600 Sobic002G106000 Sobic002G106000 Sobic002G019500--Sobic002G106000 Sobic006G212500 Sobic006G212500 Sobic002G019500--Sobic006G212500 Sobic010G153000 Sobic010G153000 Sobic002G019500--Sobic010G153000 Sobic002G059866 Sobic002G059866 Sobic002G019500--Sobic002G059866 Sobic004G313300 Sobic004G313300 Sobic002G019500--Sobic004G313300 Sobic001G489150 Sobic001G489150 Sobic002G019500--Sobic001G489150 Sobic002G019750--Sobic002G019500 Sobic007G070500 Sobic007G070500 Sobic002G019750--Sobic007G070500 Sobic002G019750--Sobic001G489150 Sobic002G019750--Sobic006G199700 Sobic002G019750--Sobic006G223800 Sobic002G019750--Sobic008G155600 Sobic005G170700 Sobic005G170700 Sobic002G019750--Sobic005G170700 Sobic002G019750--Sobic002G106000 Sobic005G064700 Sobic005G064700 Sobic002G019750--Sobic005G064700 Sobic008G155600--Sobic002G019750 Sobic008G155600--Sobic006G223800 Sobic008G155600--Sobic002G019500 Sobic008G155600--Sobic005G110421 Sobic008G155600--Sobic001G112000 Sobic008G155600--Sobic008G010900 Sobic009G156600 Sobic009G156600 Sobic008G155600--Sobic009G156600 Sobic008G155600--Sobic006G212500 Sobic008G155600--Sobic001G510400 Sobic007G152500 Sobic007G152500 Sobic010G093400--Sobic007G152500 Sobic007G204600 Sobic007G204600 Sobic010G093400--Sobic007G204600 Sobic010G273800 Sobic010G273800 Sobic010G093400--Sobic010G273800 Sobic010G093400--Sobic003G358200 Sobic003G230500 Sobic003G230500 Sobic010G093400--Sobic003G230500 Sobic002G420800 Sobic002G420800 Sobic010G093400--Sobic002G420800 Sobic002G100000 Sobic002G100000 Sobic010G093400--Sobic002G100000 Sobic004G212350 Sobic004G212350 Sobic010G093400--Sobic004G212350 Sobic005G171800 Sobic005G171800 Sobic010G093400--Sobic005G171800 Sobic001G112000--Sobic002G342100 Sobic009G128300 Sobic009G128300 Sobic001G112000--Sobic009G128300 Sobic008G031300 Sobic008G031300 Sobic001G112000--Sobic008G031300 Sobic003G227600 Sobic003G227600 Sobic001G112000--Sobic003G227600 Sobic004G211301 Sobic004G211301 Sobic001G112000--Sobic004G211301 Sobic001G509400 Sobic001G509400 Sobic001G112000--Sobic001G509400 Sobic002G331450 Sobic002G331450 Sobic001G112000--Sobic002G331450 Sobic002G182800 Sobic002G182800 Sobic001G112000--Sobic002G182800 Sobic005G096700 Sobic005G096700 Sobic001G112000--Sobic005G096700
Octagon: transcription factors


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