Gene annotation
Transcriptome id Sobic.010G090700.2,Sobic.010G090700.4,Sobic.010G090700.1,Sobic.010G090700.5,Sobic.010G090700.3
Synonym Sb10g007880
Functional annotation expressed protein
UniProt A0A194YJ50 , C5Z713 , A0A1W0VS37 , A0A1W0VS54
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g51510.1,LOC_Os06g12000.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G346750 - -
2 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
3 Sobic.006G181500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
4 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
5 Sobic.007G048900 OsFBX381 - F-box domain containing protein, expressed -
6 Sobic.002G299200 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
7 Sobic.003G270100 dehydrin family protein, expressed -
8 Sobic.002G106200 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
9 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
10 Sobic.001G414100 expressed protein -
11 Sobic.003G141600 - -
12 Sobic.002G106000 OsFBD15 - F-box and FBD domain containing protein, expressed -
13 Sobic.003G342500 methyltransferase, putative, expressed -
14 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
15 Sobic.007G216800 expressed protein -
16 Sobic.001G203800 expressed protein -
17 Sobic.001G218600 MATH domain containing protein, expressed -
18 Sobic.009G152120 - -
19 Sobic.005G070301 - K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
20 Sobic.006G017600 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9


Gene co-expression network
sample Sobic010G090700 Sobic010G090700 Sobic004G346750 Sobic004G346750 Sobic010G090700--Sobic004G346750 Sobic008G098700 Sobic008G098700 Sobic010G090700--Sobic008G098700 Sobic006G181500 Sobic006G181500 Sobic010G090700--Sobic006G181500 Sobic006G215800 Sobic006G215800 Sobic010G090700--Sobic006G215800 Sobic007G048900 Sobic007G048900 Sobic010G090700--Sobic007G048900 Sobic002G299200 Sobic002G299200 Sobic010G090700--Sobic002G299200 Sobic003G270100 Sobic003G270100 Sobic010G090700--Sobic003G270100 Sobic002G106200 Sobic002G106200 Sobic010G090700--Sobic002G106200 Sobic003G044000 Sobic003G044000 Sobic010G090700--Sobic003G044000 Sobic004G346750--Sobic010G090700 Sobic003G141600 Sobic003G141600 Sobic004G346750--Sobic003G141600 Sobic004G346750--Sobic008G098700 Sobic004G346750--Sobic007G048900 Sobic005G078300 Sobic005G078300 Sobic004G346750--Sobic005G078300 Sobic002G106000 Sobic002G106000 Sobic004G346750--Sobic002G106000 Sobic001G414100 Sobic001G414100 Sobic004G346750--Sobic001G414100 Sobic002G158300 Sobic002G158300 Sobic004G346750--Sobic002G158300 Sobic003G342500 Sobic003G342500 Sobic004G346750--Sobic003G342500 Sobic008G098700--Sobic006G215800 Sobic008G098700--Sobic002G299200 Sobic003G090000 Sobic003G090000 Sobic008G098700--Sobic003G090000 Sobic009G152120 Sobic009G152120 Sobic008G098700--Sobic009G152120 Sobic003G027000 Sobic003G027000 Sobic008G098700--Sobic003G027000 Sobic001G500500 Sobic001G500500 Sobic008G098700--Sobic001G500500 Sobic008G098700--Sobic010G090700 Sobic008G098700--Sobic002G106200 Sobic003G396500 Sobic003G396500 Sobic008G098700--Sobic003G396500 Sobic006G181500--Sobic002G106200 Sobic002G108100 Sobic002G108100 Sobic006G181500--Sobic002G108100 Sobic006G181500--Sobic006G215800 Sobic006G181500--Sobic003G270100 Sobic006G181500--Sobic010G090700 Sobic006G181500--Sobic008G098700 Sobic006G181500--Sobic007G048900 Sobic001G203800 Sobic001G203800 Sobic006G181500--Sobic001G203800 Sobic006G181500--Sobic001G500500 Sobic006G215800--Sobic003G090000 Sobic006G215800--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic006G215800--Sobic001G218600 Sobic004G313400 Sobic004G313400 Sobic006G215800--Sobic004G313400 Sobic006G215800--Sobic003G396500 Sobic006G215800--Sobic002G299200 Sobic006G215800--Sobic008G098700 Sobic007G060100 Sobic007G060100 Sobic006G215800--Sobic007G060100 Sobic005G070301 Sobic005G070301 Sobic006G215800--Sobic005G070301 Sobic001G506400 Sobic001G506400 Sobic007G048900--Sobic001G506400 Sobic007G048900--Sobic007G060100 Sobic004G168900 Sobic004G168900 Sobic007G048900--Sobic004G168900 Sobic010G263700 Sobic010G263700 Sobic007G048900--Sobic010G263700 Sobic004G038400 Sobic004G038400 Sobic007G048900--Sobic004G038400 Sobic001G034200 Sobic001G034200 Sobic007G048900--Sobic001G034200 Sobic010G263400 Sobic010G263400 Sobic007G048900--Sobic010G263400 Sobic007G048900--Sobic003G342500 Sobic007G144100 Sobic007G144100 Sobic007G048900--Sobic007G144100 Sobic002G299200--Sobic003G027000 Sobic002G299200--Sobic003G090000 Sobic002G299200--Sobic003G396500 Sobic002G299200--Sobic009G152120 Sobic002G299200--Sobic001G218600 Sobic002G299200--Sobic006G215800 Sobic002G259301 Sobic002G259301 Sobic002G299200--Sobic002G259301 Sobic001G288000 Sobic001G288000 Sobic002G299200--Sobic001G288000 Sobic002G299200--Sobic005G070301 Sobic003G270100--Sobic001G203800 Sobic003G308300 Sobic003G308300 Sobic003G270100--Sobic003G308300 Sobic003G255700 Sobic003G255700 Sobic003G270100--Sobic003G255700 Sobic001G050500 Sobic001G050500 Sobic003G270100--Sobic001G050500 Sobic004G186300 Sobic004G186300 Sobic003G270100--Sobic004G186300 Sobic006G100266 Sobic006G100266 Sobic003G270100--Sobic006G100266 Sobic004G328100 Sobic004G328100 Sobic003G270100--Sobic004G328100 Sobic001G305900 Sobic001G305900 Sobic003G270100--Sobic001G305900 Sobic006G208200 Sobic006G208200 Sobic003G270100--Sobic006G208200 Sobic002G106200--Sobic007G048900 Sobic002G106200--Sobic006G215800 Sobic002G106200--Sobic003G342500 Sobic002G106200--Sobic007G060100 Sobic001G152700 Sobic001G152700 Sobic002G106200--Sobic001G152700 Sobic002G106200--Sobic006G181500 Sobic002G106200--Sobic002G108100 Sobic010G160300 Sobic010G160300 Sobic002G106200--Sobic010G160300 Sobic002G057400 Sobic002G057400 Sobic002G106200--Sobic002G057400 Sobic003G044000--Sobic001G218600 Sobic003G044000--Sobic003G090000 Sobic003G044000--Sobic003G027000 Sobic003G044000--Sobic001G506400 Sobic001G131900 Sobic001G131900 Sobic003G044000--Sobic001G131900 Sobic003G044000--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic003G044000--Sobic009G066600 Sobic003G044000--Sobic004G313400 Sobic003G293400 Sobic003G293400 Sobic003G044000--Sobic003G293400
Octagon: transcription factors


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