Gene annotation
Transcriptome id Sobic.007G216800.1
Synonym Sb07g028320
Functional annotation expressed protein
UniProt C5YJ80
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g38880.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G158300 ankyrin, putative, expressed -
2 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
3 Sobic.002G015700 OsFBD13 - F-box and FBD domain containing protein, expressed -
4 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
5 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
6 Sobic.007G048900 OsFBX381 - F-box domain containing protein, expressed -
7 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
8 Sobic.005G201200 - -
9 Sobic.003G342500 methyltransferase, putative, expressed -
10 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
11 Sobic.004G064800 haemolysin-III, putative, expressed K07297: adiponectin receptor
12 Sobic.004G045632 - -
13 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
14 Sobic.003G211800 expressed protein -
15 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
16 Sobic.007G060100 expressed protein -
17 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.002G102300 - -
19 Sobic.002G060400 OsFBX237 - F-box domain containing protein, expressed -
20 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -


Gene co-expression network
sample Sobic007G216800 Sobic007G216800 Sobic002G158300 Sobic002G158300 Sobic007G216800--Sobic002G158300 Sobic010G255400 Sobic010G255400 Sobic007G216800--Sobic010G255400 Sobic002G015700 Sobic002G015700 Sobic007G216800--Sobic002G015700 Sobic002G304500 Sobic002G304500 Sobic007G216800--Sobic002G304500 Sobic002G016000 Sobic002G016000 Sobic007G216800--Sobic002G016000 Sobic007G048900 Sobic007G048900 Sobic007G216800--Sobic007G048900 Sobic008G041300 Sobic008G041300 Sobic007G216800--Sobic008G041300 Sobic005G201200 Sobic005G201200 Sobic007G216800--Sobic005G201200 Sobic003G342500 Sobic003G342500 Sobic007G216800--Sobic003G342500 Sobic002G158300--Sobic002G016000 Sobic002G158300--Sobic010G255400 Sobic002G158300--Sobic002G015700 Sobic002G158300--Sobic002G304500 Sobic002G158300--Sobic008G041300 Sobic002G158300--Sobic005G201200 Sobic003G211800 Sobic003G211800 Sobic002G158300--Sobic003G211800 Sobic004G064800 Sobic004G064800 Sobic002G158300--Sobic004G064800 Sobic006G013600 Sobic006G013600 Sobic002G158300--Sobic006G013600 Sobic008G007800 Sobic008G007800 Sobic010G255400--Sobic008G007800 Sobic010G255400--Sobic004G064800 Sobic010G255400--Sobic005G201200 Sobic010G255400--Sobic002G016000 Sobic010G255400--Sobic008G041300 Sobic010G255400--Sobic002G304500 Sobic001G076600 Sobic001G076600 Sobic010G255400--Sobic001G076600 Sobic010G255400--Sobic002G158300 Sobic006G199500 Sobic006G199500 Sobic010G255400--Sobic006G199500 Sobic002G243400 Sobic002G243400 Sobic002G015700--Sobic002G243400 Sobic002G015700--Sobic003G211800 Sobic002G097200 Sobic002G097200 Sobic002G015700--Sobic002G097200 Sobic004G168900 Sobic004G168900 Sobic002G015700--Sobic004G168900 Sobic009G048700 Sobic009G048700 Sobic002G015700--Sobic009G048700 Sobic002G015700--Sobic006G199500 Sobic001G504800 Sobic001G504800 Sobic002G015700--Sobic001G504800 Sobic002G015700--Sobic004G064800 Sobic009G145000 Sobic009G145000 Sobic002G015700--Sobic009G145000 Sobic002G304500--Sobic004G064800 Sobic002G304500--Sobic005G201200 Sobic002G304500--Sobic008G007800 Sobic002G304500--Sobic010G255400 Sobic002G304500--Sobic002G016000 Sobic002G304500--Sobic006G199500 Sobic004G328100 Sobic004G328100 Sobic002G304500--Sobic004G328100 Sobic008G007700 Sobic008G007700 Sobic002G304500--Sobic008G007700 Sobic004G038400 Sobic004G038400 Sobic002G304500--Sobic004G038400 Sobic002G016000--Sobic005G201200 Sobic006G038700 Sobic006G038700 Sobic002G016000--Sobic006G038700 Sobic002G016000--Sobic008G041300 Sobic002G016000--Sobic010G255400 Sobic002G016000--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic002G016000--Sobic002G361500 Sobic001G117701 Sobic001G117701 Sobic002G016000--Sobic001G117701 Sobic002G016000--Sobic004G064800 Sobic009G006700 Sobic009G006700 Sobic002G016000--Sobic009G006700 Sobic001G506400 Sobic001G506400 Sobic007G048900--Sobic001G506400 Sobic007G060100 Sobic007G060100 Sobic007G048900--Sobic007G060100 Sobic007G048900--Sobic004G168900 Sobic010G263700 Sobic010G263700 Sobic007G048900--Sobic010G263700 Sobic007G048900--Sobic004G038400 Sobic001G034200 Sobic001G034200 Sobic007G048900--Sobic001G034200 Sobic010G263400 Sobic010G263400 Sobic007G048900--Sobic010G263400 Sobic007G048900--Sobic003G342500 Sobic007G144100 Sobic007G144100 Sobic007G048900--Sobic007G144100 Sobic008G041300--Sobic002G016000 Sobic008G041300--Sobic005G201200 Sobic008G041300--Sobic010G255400 Sobic008G041300--Sobic008G007800 Sobic006G254400 Sobic006G254400 Sobic008G041300--Sobic006G254400 Sobic008G041300--Sobic001G117701 Sobic001G075201 Sobic001G075201 Sobic008G041300--Sobic001G075201 Sobic010G038000 Sobic010G038000 Sobic008G041300--Sobic010G038000 Sobic009G002100 Sobic009G002100 Sobic008G041300--Sobic009G002100 Sobic005G201200--Sobic002G016000 Sobic005G201200--Sobic008G007800 Sobic005G201200--Sobic006G038700 Sobic005G201200--Sobic004G064800 Sobic005G201200--Sobic009G006700 Sobic005G201200--Sobic010G255400 Sobic002G066700 Sobic002G066700 Sobic005G201200--Sobic002G066700 Sobic005G201200--Sobic002G304500 Sobic002G147400 Sobic002G147400 Sobic005G201200--Sobic002G147400 Sobic009G201000 Sobic009G201000 Sobic003G342500--Sobic009G201000 Sobic003G352900 Sobic003G352900 Sobic003G342500--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic003G342500--Sobic001G073700 Sobic006G116900 Sobic006G116900 Sobic003G342500--Sobic006G116900 Sobic006G156400 Sobic006G156400 Sobic003G342500--Sobic006G156400 Sobic006G265800 Sobic006G265800 Sobic003G342500--Sobic006G265800 Sobic001G308500 Sobic001G308500 Sobic003G342500--Sobic001G308500 Sobic003G342500--Sobic001G076600 Sobic002G108100 Sobic002G108100 Sobic003G342500--Sobic002G108100
Octagon: transcription factors


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