Gene annotation
Transcriptome id Sobic.004G045632.2,Sobic.004G045632.1,Sobic.004G045632.5,Sobic.004G045632.3,Sobic.004G045632.6,Sobic.004G045632.4
Synonym -
Functional annotation -
UniProt A0A1Z5RKY9 , A0A1Z5RKX0 , A0A1Z5RLZ9 , A0A1Z5RLF0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G058300 expressed protein -
2 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
3 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
4 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
5 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
6 Sobic.009G002100 expressed protein -
7 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
8 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
9 Sobic.010G027100 expressed protein -
10 Sobic.004G210300 protease Do-like 14, putative, expressed -
11 Sobic.008G007600 - -
12 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
13 Sobic.001G506400 expressed protein -
14 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
15 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
16 Sobic.009G242600 ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
17 Sobic.002G299500 expressed protein -
18 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
19 Sobic.010G038300 OsFBDUF33 - F-box and DUF domain containing protein, expressed -
20 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic004G045632 Sobic004G045632 Sobic010G058300 Sobic010G058300 Sobic004G045632--Sobic010G058300 Sobic007G144100 Sobic007G144100 Sobic004G045632--Sobic007G144100 Sobic001G076600 Sobic001G076600 Sobic004G045632--Sobic001G076600 Sobic008G166100 Sobic008G166100 Sobic004G045632--Sobic008G166100 Sobic004G038400 Sobic004G038400 Sobic004G045632--Sobic004G038400 Sobic009G002100 Sobic009G002100 Sobic004G045632--Sobic009G002100 Sobic002G243400 Sobic002G243400 Sobic004G045632--Sobic002G243400 Sobic003G352900 Sobic003G352900 Sobic004G045632--Sobic003G352900 Sobic010G027100 Sobic010G027100 Sobic004G045632--Sobic010G027100 Sobic009G202000 Sobic009G202000 Sobic010G058300--Sobic009G202000 Sobic010G058300--Sobic004G045632 Sobic010G058300--Sobic009G002100 Sobic001G432200 Sobic001G432200 Sobic010G058300--Sobic001G432200 Sobic002G299500 Sobic002G299500 Sobic010G058300--Sobic002G299500 Sobic004G250800 Sobic004G250800 Sobic010G058300--Sobic004G250800 Sobic010G058300--Sobic007G144100 Sobic010G058300--Sobic002G243400 Sobic001G322400 Sobic001G322400 Sobic010G058300--Sobic001G322400 Sobic003G258100 Sobic003G258100 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic007G144100--Sobic003G217800 Sobic007G144100--Sobic010G058300 Sobic001G506400 Sobic001G506400 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400 Sobic001G076600--Sobic003G352900 Sobic001G076600--Sobic007G144100 Sobic001G076600--Sobic008G166100 Sobic001G076600--Sobic004G038400 Sobic001G076600--Sobic002G299500 Sobic001G076600--Sobic004G045632 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic003G376900 Sobic003G376900 Sobic001G076600--Sobic003G376900 Sobic001G384200 Sobic001G384200 Sobic008G166100--Sobic001G384200 Sobic007G039200 Sobic007G039200 Sobic008G166100--Sobic007G039200 Sobic009G178400 Sobic009G178400 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic008G166100--Sobic009G202000 Sobic001G340800 Sobic001G340800 Sobic008G166100--Sobic001G340800 Sobic001G387300 Sobic001G387300 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic004G038400--Sobic005G173700 Sobic009G048700 Sobic009G048700 Sobic004G038400--Sobic009G048700 Sobic004G038400--Sobic001G076600 Sobic004G168900 Sobic004G168900 Sobic004G038400--Sobic004G168900 Sobic003G005700 Sobic003G005700 Sobic004G038400--Sobic003G005700 Sobic004G038400--Sobic007G144100 Sobic004G038400--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic004G038400--Sobic008G056600 Sobic004G038400--Sobic009G002100 Sobic009G145000 Sobic009G145000 Sobic009G002100--Sobic009G145000 Sobic009G002100--Sobic002G243400 Sobic001G417700 Sobic001G417700 Sobic009G002100--Sobic001G417700 Sobic002G418300 Sobic002G418300 Sobic009G002100--Sobic002G418300 Sobic001G240600 Sobic001G240600 Sobic009G002100--Sobic001G240600 Sobic008G155700 Sobic008G155700 Sobic009G002100--Sobic008G155700 Sobic002G189500 Sobic002G189500 Sobic009G002100--Sobic002G189500 Sobic004G080800 Sobic004G080800 Sobic009G002100--Sobic004G080800 Sobic001G220500 Sobic001G220500 Sobic009G002100--Sobic001G220500 Sobic002G243400--Sobic009G145000 Sobic002G243400--Sobic001G417700 Sobic002G243400--Sobic009G048700 Sobic002G243400--Sobic002G189500 Sobic010G061600 Sobic010G061600 Sobic002G243400--Sobic010G061600 Sobic009G008000 Sobic009G008000 Sobic002G243400--Sobic009G008000 Sobic002G243400--Sobic009G002100 Sobic002G243400--Sobic002G418300 Sobic004G190400 Sobic004G190400 Sobic002G243400--Sobic004G190400 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic005G045800 Sobic005G045800 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic010G027100--Sobic002G243400 Sobic010G027100--Sobic009G145000 Sobic010G027100--Sobic001G417700 Sobic010G027100--Sobic010G058300 Sobic010G027100--Sobic002G418300 Sobic010G027100--Sobic009G002100 Sobic009G229400 Sobic009G229400 Sobic010G027100--Sobic009G229400 Sobic010G027100--Sobic009G048700 Sobic005G174750 Sobic005G174750 Sobic010G027100--Sobic005G174750
Octagon: transcription factors


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