Gene annotation
Transcriptome id Sobic.005G201200.1
Synonym
Functional annotation -
UniProt A0A1B6PTN9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
2 Sobic.008G007800 - -
3 Sobic.006G038700 - -
4 Sobic.004G064800 haemolysin-III, putative, expressed K07297: adiponectin receptor
5 Sobic.009G006700 vacuolar ATP synthase, putative, expressed K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
6 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
7 Sobic.002G066700 OsFBL33 - F-box domain and LRR containing protein, expressed -
8 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
9 Sobic.002G147400 homeodomain-related, putative, expressed -
10 Sobic.001G117701 - -
11 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
12 Sobic.010G198400 expressed protein -
13 Sobic.009G056900 acetyltransferase, GNAT family protein, expressed -
14 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
15 Sobic.001G075201 - -
16 Sobic.006G199500 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
17 Sobic.009G048700 expressed protein -
18 Sobic.010G038000 ATP-binding region, ATPase-like domain containing protein, expressed -
19 Sobic.002G424200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
20 Sobic.009G008000 transcription factor Dp, putative, expressed -


Gene co-expression network
sample Sobic005G201200 Sobic005G201200 Sobic002G016000 Sobic002G016000 Sobic005G201200--Sobic002G016000 Sobic008G007800 Sobic008G007800 Sobic005G201200--Sobic008G007800 Sobic006G038700 Sobic006G038700 Sobic005G201200--Sobic006G038700 Sobic004G064800 Sobic004G064800 Sobic005G201200--Sobic004G064800 Sobic009G006700 Sobic009G006700 Sobic005G201200--Sobic009G006700 Sobic010G255400 Sobic010G255400 Sobic005G201200--Sobic010G255400 Sobic002G066700 Sobic002G066700 Sobic005G201200--Sobic002G066700 Sobic002G304500 Sobic002G304500 Sobic005G201200--Sobic002G304500 Sobic002G147400 Sobic002G147400 Sobic005G201200--Sobic002G147400 Sobic002G016000--Sobic005G201200 Sobic002G016000--Sobic006G038700 Sobic008G041300 Sobic008G041300 Sobic002G016000--Sobic008G041300 Sobic002G016000--Sobic010G255400 Sobic002G016000--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic002G016000--Sobic002G361500 Sobic001G117701 Sobic001G117701 Sobic002G016000--Sobic001G117701 Sobic002G016000--Sobic004G064800 Sobic002G016000--Sobic009G006700 Sobic008G007800--Sobic004G064800 Sobic008G007800--Sobic005G201200 Sobic009G048700 Sobic009G048700 Sobic008G007800--Sobic009G048700 Sobic006G199500 Sobic006G199500 Sobic008G007800--Sobic006G199500 Sobic008G007800--Sobic009G006700 Sobic009G145000 Sobic009G145000 Sobic008G007800--Sobic009G145000 Sobic008G007800--Sobic010G255400 Sobic002G243400 Sobic002G243400 Sobic008G007800--Sobic002G243400 Sobic009G008000 Sobic009G008000 Sobic008G007800--Sobic009G008000 Sobic006G038700--Sobic009G006700 Sobic006G038700--Sobic001G117701 Sobic006G038700--Sobic005G201200 Sobic006G038700--Sobic002G016000 Sobic008G105600 Sobic008G105600 Sobic006G038700--Sobic008G105600 Sobic010G143633 Sobic010G143633 Sobic006G038700--Sobic010G143633 Sobic006G038700--Sobic002G361500 Sobic005G144500 Sobic005G144500 Sobic006G038700--Sobic005G144500 Sobic010G198400 Sobic010G198400 Sobic006G038700--Sobic010G198400 Sobic004G064800--Sobic008G007800 Sobic004G064800--Sobic002G304500 Sobic004G064800--Sobic005G201200 Sobic004G064800--Sobic010G255400 Sobic004G064800--Sobic006G199500 Sobic004G064800--Sobic009G048700 Sobic008G007700 Sobic008G007700 Sobic004G064800--Sobic008G007700 Sobic004G064800--Sobic002G016000 Sobic004G064800--Sobic009G006700 Sobic007G219601 Sobic007G219601 Sobic009G006700--Sobic007G219601 Sobic007G094700 Sobic007G094700 Sobic009G006700--Sobic007G094700 Sobic004G203150 Sobic004G203150 Sobic009G006700--Sobic004G203150 Sobic009G006700--Sobic009G048700 Sobic009G006700--Sobic009G008000 Sobic009G006700--Sobic005G144500 Sobic008G155700 Sobic008G155700 Sobic009G006700--Sobic008G155700 Sobic009G006700--Sobic006G038700 Sobic010G038000 Sobic010G038000 Sobic009G006700--Sobic010G038000 Sobic010G255400--Sobic008G007800 Sobic010G255400--Sobic004G064800 Sobic010G255400--Sobic005G201200 Sobic010G255400--Sobic002G016000 Sobic010G255400--Sobic008G041300 Sobic010G255400--Sobic002G304500 Sobic001G076600 Sobic001G076600 Sobic010G255400--Sobic001G076600 Sobic002G158300 Sobic002G158300 Sobic010G255400--Sobic002G158300 Sobic010G255400--Sobic006G199500 Sobic009G056900 Sobic009G056900 Sobic002G066700--Sobic009G056900 Sobic002G066700--Sobic002G147400 Sobic001G392700 Sobic001G392700 Sobic002G066700--Sobic001G392700 Sobic002G066700--Sobic005G201200 Sobic007G086701 Sobic007G086701 Sobic002G066700--Sobic007G086701 Sobic002G066700--Sobic006G038700 Sobic001G264600 Sobic001G264600 Sobic002G066700--Sobic001G264600 Sobic005G206800 Sobic005G206800 Sobic002G066700--Sobic005G206800 Sobic002G066700--Sobic002G016000 Sobic002G304500--Sobic004G064800 Sobic002G304500--Sobic005G201200 Sobic002G304500--Sobic008G007800 Sobic002G304500--Sobic010G255400 Sobic002G304500--Sobic002G016000 Sobic002G304500--Sobic006G199500 Sobic004G328100 Sobic004G328100 Sobic002G304500--Sobic004G328100 Sobic002G304500--Sobic008G007700 Sobic004G038400 Sobic004G038400 Sobic002G304500--Sobic004G038400 Sobic002G147400--Sobic009G056900 Sobic002G147400--Sobic002G066700 Sobic002G147400--Sobic001G392700 Sobic001G075201 Sobic001G075201 Sobic002G147400--Sobic001G075201 Sobic002G147400--Sobic005G201200 Sobic001G075200 Sobic001G075200 Sobic002G147400--Sobic001G075200 Sobic002G147400--Sobic006G038700 Sobic001G194500 Sobic001G194500 Sobic002G147400--Sobic001G194500 Sobic002G147400--Sobic002G016000
Octagon: transcription factors


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