Gene annotation
Transcriptome id Sobic.002G424200.3,Sobic.002G424200.2
Synonym AKINBETA1, Sb02g043500
Functional annotation SNF1-related protein kinase regulatory subunit beta-1, putative, expressed
UniProt A0A1W0W862 , A0A1W0W825
Pfam PF04739 PF16561
Panther DB PTHR10343 PTHR10343:SF54
NCBI CDD KOG1616; Protein involved in Snf1 protein kinase complex assembly
KEGG Orthology K07199; 5'-AMP-activated protein kinase, regulatory beta subunit
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G21170 : 5\'-AMP-activated protein kinase beta-2 subunit protein
RAP-DB (Rice) LOC_Os03g20340.1 : SNF1-related protein kinase regulatory subunit beta-1, putative, expressed
MaizeGDB (Corn) Zm00025a002225 , Zm00025a049217 , Zm00025a025713
Brachypodium -
Barley HORVU2Hr1G016730.2 , HORVU2Hr1G016730.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G424200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G198400 expressed protein -
2 Sobic.009G008000 transcription factor Dp, putative, expressed -
3 Sobic.007G219601 - -
4 Sobic.008G155700 ankyrin repeat domain-containing protein 44, putative, expressed -
5 Sobic.009G006700 vacuolar ATP synthase, putative, expressed K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
6 Sobic.004G020200 expressed protein -
7 Sobic.007G094700 - -
8 Sobic.004G203150 - -
9 Sobic.006G254400 expressed protein -
10 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
11 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
12 Sobic.009G048700 expressed protein -
13 Sobic.005G144500 glycosyltransferase, putative, expressed -
14 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
15 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
16 Sobic.010G038000 ATP-binding region, ATPase-like domain containing protein, expressed -
17 Sobic.003G133600 major facilitator superfamily antiporter, putative, expressed -
18 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
19 Sobic.006G064450 - -
20 Sobic.010G061600 - -


Gene co-expression network
sample Sobic002G424200 Sobic002G424200 Sobic010G198400 Sobic010G198400 Sobic002G424200--Sobic010G198400 Sobic009G008000 Sobic009G008000 Sobic002G424200--Sobic009G008000 Sobic007G219601 Sobic007G219601 Sobic002G424200--Sobic007G219601 Sobic008G155700 Sobic008G155700 Sobic002G424200--Sobic008G155700 Sobic009G006700 Sobic009G006700 Sobic002G424200--Sobic009G006700 Sobic004G020200 Sobic004G020200 Sobic002G424200--Sobic004G020200 Sobic007G094700 Sobic007G094700 Sobic002G424200--Sobic007G094700 Sobic004G203150 Sobic004G203150 Sobic002G424200--Sobic004G203150 Sobic006G254400 Sobic006G254400 Sobic002G424200--Sobic006G254400 Sobic010G198400--Sobic002G424200 Sobic010G038000 Sobic010G038000 Sobic010G198400--Sobic010G038000 Sobic010G198400--Sobic006G254400 Sobic010G198400--Sobic009G006700 Sobic009G048700 Sobic009G048700 Sobic010G198400--Sobic009G048700 Sobic010G198400--Sobic004G020200 Sobic002G243400 Sobic002G243400 Sobic010G198400--Sobic002G243400 Sobic006G199500 Sobic006G199500 Sobic010G198400--Sobic006G199500 Sobic010G198400--Sobic009G008000 Sobic009G008000--Sobic009G048700 Sobic009G008000--Sobic007G094700 Sobic009G008000--Sobic004G203150 Sobic001G417700 Sobic001G417700 Sobic009G008000--Sobic001G417700 Sobic009G145000 Sobic009G145000 Sobic009G008000--Sobic009G145000 Sobic009G008000--Sobic007G219601 Sobic009G008000--Sobic008G155700 Sobic002G418300 Sobic002G418300 Sobic009G008000--Sobic002G418300 Sobic002G189500 Sobic002G189500 Sobic009G008000--Sobic002G189500 Sobic007G219601--Sobic007G094700 Sobic007G219601--Sobic004G203150 Sobic003G133600 Sobic003G133600 Sobic007G219601--Sobic003G133600 Sobic007G219601--Sobic002G418300 Sobic006G064450 Sobic006G064450 Sobic007G219601--Sobic006G064450 Sobic007G219601--Sobic008G155700 Sobic007G219601--Sobic009G008000 Sobic007G219601--Sobic001G417700 Sobic004G328200 Sobic004G328200 Sobic007G219601--Sobic004G328200 Sobic008G155700--Sobic007G094700 Sobic008G155700--Sobic001G417700 Sobic008G155700--Sobic002G418300 Sobic008G155700--Sobic004G203150 Sobic008G155700--Sobic009G048700 Sobic008G155700--Sobic007G219601 Sobic008G155700--Sobic003G133600 Sobic008G155700--Sobic009G008000 Sobic008G155700--Sobic009G145000 Sobic009G006700--Sobic007G219601 Sobic009G006700--Sobic007G094700 Sobic009G006700--Sobic004G203150 Sobic009G006700--Sobic009G048700 Sobic009G006700--Sobic009G008000 Sobic005G144500 Sobic005G144500 Sobic009G006700--Sobic005G144500 Sobic009G006700--Sobic008G155700 Sobic006G038700 Sobic006G038700 Sobic009G006700--Sobic006G038700 Sobic009G006700--Sobic010G038000 Sobic004G020200--Sobic001G417700 Sobic004G020200--Sobic009G008000 Sobic004G020200--Sobic007G094700 Sobic004G020200--Sobic009G048700 Sobic004G020200--Sobic007G219601 Sobic001G136000 Sobic001G136000 Sobic004G020200--Sobic001G136000 Sobic004G020200--Sobic008G155700 Sobic004G020200--Sobic002G418300 Sobic004G020200--Sobic009G145000 Sobic007G094700--Sobic004G203150 Sobic007G094700--Sobic007G219601 Sobic007G094700--Sobic003G133600 Sobic007G094700--Sobic002G418300 Sobic007G094700--Sobic001G417700 Sobic007G094700--Sobic004G328200 Sobic007G094700--Sobic008G155700 Sobic007G094700--Sobic009G008000 Sobic001G029300 Sobic001G029300 Sobic007G094700--Sobic001G029300 Sobic004G203150--Sobic007G094700 Sobic004G203150--Sobic007G219601 Sobic004G203150--Sobic003G133600 Sobic004G203150--Sobic002G418300 Sobic004G203150--Sobic001G029300 Sobic004G203150--Sobic004G328200 Sobic004G203150--Sobic001G417700 Sobic004G203150--Sobic009G008000 Sobic004G203150--Sobic008G155700 Sobic006G254400--Sobic004G020200 Sobic006G254400--Sobic010G198400 Sobic006G254400--Sobic002G424200 Sobic006G254400--Sobic001G417700 Sobic006G254400--Sobic010G038000 Sobic006G254400--Sobic002G418300 Sobic006G254400--Sobic009G048700 Sobic006G254400--Sobic005G144500 Sobic003G211800 Sobic003G211800 Sobic006G254400--Sobic003G211800
Octagon: transcription factors


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