Gene annotation
Transcriptome id Sobic.006G254400.1
Synonym Sb06g031830
Functional annotation expressed protein
UniProt C5Y9Y2
Pfam -
Panther DB PTHR22939 PTHR22939:SF96
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g06910.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT70768 , PNT70766 , KQK05028 , PNT70767
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G254400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G020200 expressed protein -
2 Sobic.010G198400 expressed protein -
3 Sobic.002G424200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
4 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
5 Sobic.010G038000 ATP-binding region, ATPase-like domain containing protein, expressed -
6 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
7 Sobic.009G048700 expressed protein -
8 Sobic.005G144500 glycosyltransferase, putative, expressed -
9 Sobic.003G211800 expressed protein -
10 Sobic.001G136000 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
11 Sobic.007G094700 - -
12 Sobic.008G155700 ankyrin repeat domain-containing protein 44, putative, expressed -
13 Sobic.007G219601 - -
14 Sobic.002G099700 OsFBX195 - F-box domain containing protein, expressed -
15 Sobic.002G123300 expressed protein -
16 Sobic.009G008000 transcription factor Dp, putative, expressed -
17 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
18 Sobic.008G056600 OsFBX237 - F-box domain containing protein, expressed -
19 Sobic.002G080450 - -
20 Sobic.009G006700 vacuolar ATP synthase, putative, expressed K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit


Gene co-expression network
sample Sobic006G254400 Sobic006G254400 Sobic004G020200 Sobic004G020200 Sobic006G254400--Sobic004G020200 Sobic010G198400 Sobic010G198400 Sobic006G254400--Sobic010G198400 Sobic002G424200 Sobic002G424200 Sobic006G254400--Sobic002G424200 Sobic001G417700 Sobic001G417700 Sobic006G254400--Sobic001G417700 Sobic010G038000 Sobic010G038000 Sobic006G254400--Sobic010G038000 Sobic002G418300 Sobic002G418300 Sobic006G254400--Sobic002G418300 Sobic009G048700 Sobic009G048700 Sobic006G254400--Sobic009G048700 Sobic005G144500 Sobic005G144500 Sobic006G254400--Sobic005G144500 Sobic003G211800 Sobic003G211800 Sobic006G254400--Sobic003G211800 Sobic004G020200--Sobic001G417700 Sobic009G008000 Sobic009G008000 Sobic004G020200--Sobic009G008000 Sobic007G094700 Sobic007G094700 Sobic004G020200--Sobic007G094700 Sobic004G020200--Sobic009G048700 Sobic007G219601 Sobic007G219601 Sobic004G020200--Sobic007G219601 Sobic001G136000 Sobic001G136000 Sobic004G020200--Sobic001G136000 Sobic008G155700 Sobic008G155700 Sobic004G020200--Sobic008G155700 Sobic004G020200--Sobic002G418300 Sobic009G145000 Sobic009G145000 Sobic004G020200--Sobic009G145000 Sobic010G198400--Sobic002G424200 Sobic010G198400--Sobic010G038000 Sobic010G198400--Sobic006G254400 Sobic009G006700 Sobic009G006700 Sobic010G198400--Sobic009G006700 Sobic010G198400--Sobic009G048700 Sobic010G198400--Sobic004G020200 Sobic002G243400 Sobic002G243400 Sobic010G198400--Sobic002G243400 Sobic006G199500 Sobic006G199500 Sobic010G198400--Sobic006G199500 Sobic010G198400--Sobic009G008000 Sobic002G424200--Sobic010G198400 Sobic002G424200--Sobic009G008000 Sobic002G424200--Sobic007G219601 Sobic002G424200--Sobic008G155700 Sobic002G424200--Sobic009G006700 Sobic002G424200--Sobic004G020200 Sobic002G424200--Sobic007G094700 Sobic004G203150 Sobic004G203150 Sobic002G424200--Sobic004G203150 Sobic002G424200--Sobic006G254400 Sobic007G128000 Sobic007G128000 Sobic001G417700--Sobic007G128000 Sobic001G417700--Sobic002G418300 Sobic001G417700--Sobic007G094700 Sobic001G417700--Sobic009G145000 Sobic002G101600 Sobic002G101600 Sobic001G417700--Sobic002G101600 Sobic006G266400 Sobic006G266400 Sobic001G417700--Sobic006G266400 Sobic001G417700--Sobic001G136000 Sobic002G189500 Sobic002G189500 Sobic001G417700--Sobic002G189500 Sobic001G240600 Sobic001G240600 Sobic001G417700--Sobic001G240600 Sobic010G038000--Sobic009G006700 Sobic010G038000--Sobic009G048700 Sobic010G038000--Sobic007G219601 Sobic010G038000--Sobic010G198400 Sobic010G038000--Sobic001G417700 Sobic010G038000--Sobic004G020200 Sobic010G038000--Sobic007G094700 Sobic010G038000--Sobic002G243400 Sobic010G038000--Sobic008G155700 Sobic002G418300--Sobic001G417700 Sobic002G418300--Sobic007G094700 Sobic003G133600 Sobic003G133600 Sobic002G418300--Sobic003G133600 Sobic002G418300--Sobic004G203150 Sobic001G029300 Sobic001G029300 Sobic002G418300--Sobic001G029300 Sobic002G418300--Sobic002G101600 Sobic004G328200 Sobic004G328200 Sobic002G418300--Sobic004G328200 Sobic002G418300--Sobic002G189500 Sobic002G418300--Sobic008G155700 Sobic009G048700--Sobic009G008000 Sobic009G048700--Sobic001G417700 Sobic009G048700--Sobic008G155700 Sobic009G048700--Sobic009G145000 Sobic009G048700--Sobic007G094700 Sobic009G048700--Sobic006G199500 Sobic009G048700--Sobic004G203150 Sobic009G048700--Sobic002G418300 Sobic009G048700--Sobic007G219601 Sobic006G064450 Sobic006G064450 Sobic005G144500--Sobic006G064450 Sobic005G144500--Sobic007G219601 Sobic005G144500--Sobic007G094700 Sobic005G144500--Sobic008G155700 Sobic005G144500--Sobic009G006700 Sobic005G144500--Sobic003G133600 Sobic005G144500--Sobic004G203150 Sobic010G049700 Sobic010G049700 Sobic005G144500--Sobic010G049700 Sobic005G144500--Sobic010G038000 Sobic003G211800--Sobic002G418300 Sobic003G211800--Sobic001G417700 Sobic003G211800--Sobic009G048700 Sobic003G211800--Sobic009G145000 Sobic003G211800--Sobic009G008000 Sobic003G211800--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic003G211800--Sobic008G056600 Sobic003G211800--Sobic001G136000 Sobic002G099700 Sobic002G099700 Sobic003G211800--Sobic002G099700
Octagon: transcription factors


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