Gene annotation
Transcriptome id Sobic.003G281600.1
Synonym Sb03g033310
Functional annotation lachrymatory factor synthase, putative, expressed
UniProt A0A1W0VZ95
Pfam PF10604
Panther DB PTHR33789 PTHR33789:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32870 : Polyketide cyclase/dehydrase and lipid transport superfamily protein
RAP-DB (Rice) LOC_Os01g52570.1 : lachrymatory factor synthase, putative, expressed
MaizeGDB (Corn) Zm00025a027731
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G281600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110421 - -
2 Sobic.006G119600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@GRAM and C2 domains containing protein, putative, expressed -
3 Sobic.010G114300 expressed protein -
4 Sobic.005G061000 ABC-2 type transporter domain containing protein, expressed -
5 Sobic.006G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
6 Sobic.003G197300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AR791, putative, expressed -
7 Sobic.003G224200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
8 Sobic.001G418600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
9 Sobic.010G253500 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
10 Sobic.001G310700 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
11 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
12 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
13 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
14 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
15 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
16 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
17 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
18 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
19 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
20 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic003G281600 Sobic003G281600 Sobic005G110421 Sobic005G110421 Sobic003G281600--Sobic005G110421 Sobic006G119600 Sobic006G119600 Sobic003G281600--Sobic006G119600 Sobic010G114300 Sobic010G114300 Sobic003G281600--Sobic010G114300 Sobic005G061000 Sobic005G061000 Sobic003G281600--Sobic005G061000 Sobic006G081200 Sobic006G081200 Sobic003G281600--Sobic006G081200 Sobic003G197300 Sobic003G197300 Sobic003G281600--Sobic003G197300 Sobic003G224200 Sobic003G224200 Sobic003G281600--Sobic003G224200 Sobic001G418600 Sobic001G418600 Sobic003G281600--Sobic001G418600 Sobic010G253500 Sobic010G253500 Sobic003G281600--Sobic010G253500 Sobic005G110421--Sobic003G281600 Sobic006G223800 Sobic006G223800 Sobic005G110421--Sobic006G223800 Sobic005G110421--Sobic003G197300 Sobic001G510400 Sobic001G510400 Sobic005G110421--Sobic001G510400 Sobic003G358200 Sobic003G358200 Sobic005G110421--Sobic003G358200 Sobic001G112000 Sobic001G112000 Sobic005G110421--Sobic001G112000 Sobic008G010900 Sobic008G010900 Sobic005G110421--Sobic008G010900 Sobic002G185300 Sobic002G185300 Sobic005G110421--Sobic002G185300 Sobic010G093400 Sobic010G093400 Sobic005G110421--Sobic010G093400 Sobic006G119600--Sobic003G224200 Sobic006G119600--Sobic003G281600 Sobic001G027800 Sobic001G027800 Sobic006G119600--Sobic001G027800 Sobic003G374600 Sobic003G374600 Sobic006G119600--Sobic003G374600 Sobic006G119600--Sobic005G061000 Sobic005G061033 Sobic005G061033 Sobic006G119600--Sobic005G061033 Sobic006G272700 Sobic006G272700 Sobic006G119600--Sobic006G272700 Sobic009G118600 Sobic009G118600 Sobic006G119600--Sobic009G118600 Sobic005G215766 Sobic005G215766 Sobic006G119600--Sobic005G215766 Sobic010G114300--Sobic003G281600 Sobic010G114300--Sobic005G110421 Sobic010G114300--Sobic006G119600 Sobic010G114300--Sobic003G224200 Sobic010G114300--Sobic006G223800 Sobic010G114300--Sobic006G081200 Sobic010G114300--Sobic003G197300 Sobic009G238600 Sobic009G238600 Sobic010G114300--Sobic009G238600 Sobic007G150500 Sobic007G150500 Sobic010G114300--Sobic007G150500 Sobic005G061000--Sobic005G061033 Sobic002G037400 Sobic002G037400 Sobic005G061000--Sobic002G037400 Sobic007G143100 Sobic007G143100 Sobic005G061000--Sobic007G143100 Sobic001G155300 Sobic001G155300 Sobic005G061000--Sobic001G155300 Sobic005G016900 Sobic005G016900 Sobic005G061000--Sobic005G016900 Sobic003G397400 Sobic003G397400 Sobic005G061000--Sobic003G397400 Sobic007G169600 Sobic007G169600 Sobic005G061000--Sobic007G169600 Sobic007G143200 Sobic007G143200 Sobic005G061000--Sobic007G143200 Sobic002G325600 Sobic002G325600 Sobic005G061000--Sobic002G325600 Sobic001G166401 Sobic001G166401 Sobic006G081200--Sobic001G166401 Sobic003G242200 Sobic003G242200 Sobic006G081200--Sobic003G242200 Sobic003G331700 Sobic003G331700 Sobic006G081200--Sobic003G331700 Sobic003G353000 Sobic003G353000 Sobic006G081200--Sobic003G353000 Sobic010G274300 Sobic010G274300 Sobic006G081200--Sobic010G274300 Sobic004G105300 Sobic004G105300 Sobic006G081200--Sobic004G105300 Sobic001G324700 Sobic001G324700 Sobic006G081200--Sobic001G324700 Sobic006G081200--Sobic003G281600 Sobic008G154400 Sobic008G154400 Sobic006G081200--Sobic008G154400 Sobic003G197300--Sobic005G110421 Sobic001G206300 Sobic001G206300 Sobic003G197300--Sobic001G206300 Sobic002G225300 Sobic002G225300 Sobic003G197300--Sobic002G225300 Sobic003G197300--Sobic001G510400 Sobic003G197300--Sobic005G061033 Sobic003G197300--Sobic002G185300 Sobic003G289900 Sobic003G289900 Sobic003G197300--Sobic003G289900 Sobic003G197300--Sobic005G061000 Sobic003G197300--Sobic003G281600 Sobic003G224200--Sobic006G119600 Sobic003G224200--Sobic003G281600 Sobic003G224200--Sobic009G238600 Sobic003G224200--Sobic005G061033 Sobic003G224200--Sobic005G061000 Sobic003G224200--Sobic003G197300 Sobic010G146500 Sobic010G146500 Sobic003G224200--Sobic010G146500 Sobic003G224200--Sobic001G027800 Sobic003G224200--Sobic010G114300 Sobic004G083600 Sobic004G083600 Sobic001G418600--Sobic004G083600 Sobic001G418600--Sobic002G185300 Sobic001G418600--Sobic003G281600 Sobic001G418600--Sobic001G206300 Sobic003G039400 Sobic003G039400 Sobic001G418600--Sobic003G039400 Sobic003G409800 Sobic003G409800 Sobic001G418600--Sobic003G409800 Sobic001G418600--Sobic003G331700 Sobic007G180300 Sobic007G180300 Sobic001G418600--Sobic007G180300 Sobic001G418600--Sobic005G061033 Sobic001G210250 Sobic001G210250 Sobic010G253500--Sobic001G210250 Sobic001G164100 Sobic001G164100 Sobic010G253500--Sobic001G164100 Sobic001G210200 Sobic001G210200 Sobic010G253500--Sobic001G210200
Octagon: transcription factors


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