Gene annotation
Transcriptome id Sobic.006G081200.1
Synonym Sb06g016810
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phospholipase C, putative, expressed
UniProt C5YGH7
Pfam -
Panther DB PTHR13593 PTHR13593:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G49740 : PLC-like phosphodiesterases superfamily protein
RAP-DB (Rice) LOC_Os04g35100.1 : phospholipase C, putative, expressed
MaizeGDB (Corn) Zm00025a011389
Brachypodium KQJ82642 , KQJ82640 , KQJ82641 , KQJ82638
Barley HORVU2Hr1G075110.8 , HORVU2Hr1G075110.9 , HORVU2Hr1G075110.6 , HORVU2Hr1G075110.7 , HORVU2Hr1G075110.4 , HORVU2Hr1G075110.5 , HORVU2Hr1G075110.2 , HORVU2Hr1G075110.3 , HORVU2Hr1G075110.1 , HORVU2Hr1G075110.14 , HORVU2Hr1G075110.15 , HORVU2Hr1G125260.2 , HORVU2Hr1G125260.3 , HORVU2Hr1G125260.1 , HORVU2Hr1G125260.4 , HORVU2Hr1G125260.5 , HORVU4Hr1G039690.1 , HORVU2Hr1G075110.16 , HORVU2Hr1G075110.17 , HORVU2Hr1G075110.10 , HORVU2Hr1G075110.11 , HORVU2Hr1G075110.12 , HORVU2Hr1G075110.13 , HORVU2Hr1G075110.18 , HORVU2Hr1G075110.19 , HORVU2Hr1G075110.22 , HORVU2Hr1G075110.21 , HORVU2Hr1G075110.20 , HORVU2Hr1G075110.23 , HORVU2Hr1G075110.25 , HORVU2Hr1G075110.24
Wheat TraesCS2D02G582400 , TraesCS2A02G570900 , TraesCS2D02G181900 , TraesCS2D02G301400 , TraesCSU02G038600 , TraesCS2A02G174500 , TraesCS2A02G302700 , TraesCS2B02G318600 , TraesCS2A02G302700
Populus -


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cDNA sequences
Sobic.006G081200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G166401 - -
2 Sobic.003G242200 Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
3 Sobic.003G331700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin, putative, expressed -
4 Sobic.003G353000 WRKY56, expressed -
5 Sobic.010G274300 ZOS6-11 - C2H2 zinc finger protein, expressed -
6 Sobic.004G105300 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.001G324700 cysteine proteinase inhibitor 8 precursor, putative, expressed -
8 Sobic.003G281600 lachrymatory factor synthase, putative, expressed -
9 Sobic.008G154400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.010G216800 expressed protein -
11 Sobic.007G172800 ZOS8-13 - C2H2 zinc finger protein, expressed -
12 Sobic.001G166500 gibberellin 20 oxidase 2, putative, expressed -
13 Sobic.002G211501 - -
14 Sobic.003G438700 AWPM-19-like membrane family protein, putative, expressed -
15 Sobic.001G203100 expressed protein -
16 Sobic.007G176500 - -
17 Sobic.006G059900 "ZmIPT2(Ortholog in maize:Weng et al., 2013)"(PubMedID : 31659896)@IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
18 Sobic.001G259300 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
19 Sobic.003G105600 no apical meristem protein, putative, expressed -
20 Sobic.002G291132 - -


Gene co-expression network
sample Sobic006G081200 Sobic006G081200 Sobic001G166401 Sobic001G166401 Sobic006G081200--Sobic001G166401 Sobic003G242200 Sobic003G242200 Sobic006G081200--Sobic003G242200 Sobic003G331700 Sobic003G331700 Sobic006G081200--Sobic003G331700 Sobic003G353000 Sobic003G353000 Sobic006G081200--Sobic003G353000 Sobic010G274300 Sobic010G274300 Sobic006G081200--Sobic010G274300 Sobic004G105300 Sobic004G105300 Sobic006G081200--Sobic004G105300 Sobic001G324700 Sobic001G324700 Sobic006G081200--Sobic001G324700 Sobic003G281600 Sobic003G281600 Sobic006G081200--Sobic003G281600 Sobic008G154400 Sobic008G154400 Sobic006G081200--Sobic008G154400 Sobic004G042400 Sobic004G042400 Sobic001G166401--Sobic004G042400 Sobic005G110445 Sobic005G110445 Sobic001G166401--Sobic005G110445 Sobic005G087666 Sobic005G087666 Sobic001G166401--Sobic005G087666 Sobic002G274900 Sobic002G274900 Sobic001G166401--Sobic002G274900 Sobic005G199300 Sobic005G199300 Sobic001G166401--Sobic005G199300 Sobic002G362400 Sobic002G362400 Sobic001G166401--Sobic002G362400 Sobic007G036600 Sobic007G036600 Sobic001G166401--Sobic007G036600 Sobic009G010150 Sobic009G010150 Sobic001G166401--Sobic009G010150 Sobic003G226000 Sobic003G226000 Sobic001G166401--Sobic003G226000 Sobic007G156300 Sobic007G156300 Sobic003G242200--Sobic007G156300 Sobic010G136300 Sobic010G136300 Sobic003G242200--Sobic010G136300 Sobic005G223200 Sobic005G223200 Sobic003G242200--Sobic005G223200 Sobic003G105600 Sobic003G105600 Sobic003G242200--Sobic003G105600 Sobic004G313800 Sobic004G313800 Sobic003G242200--Sobic004G313800 Sobic001G326000 Sobic001G326000 Sobic003G242200--Sobic001G326000 Sobic008G013100 Sobic008G013100 Sobic003G242200--Sobic008G013100 Sobic006G059900 Sobic006G059900 Sobic003G242200--Sobic006G059900 Sobic003G438700 Sobic003G438700 Sobic003G242200--Sobic003G438700 Sobic004G270350 Sobic004G270350 Sobic003G331700--Sobic004G270350 Sobic006G132300 Sobic006G132300 Sobic003G331700--Sobic006G132300 Sobic003G331700--Sobic003G242200 Sobic003G331700--Sobic005G087666 Sobic003G331700--Sobic007G036600 Sobic003G331700--Sobic002G362400 Sobic010G044600 Sobic010G044600 Sobic003G331700--Sobic010G044600 Sobic010G237100 Sobic010G237100 Sobic003G331700--Sobic010G237100 Sobic007G029800 Sobic007G029800 Sobic003G331700--Sobic007G029800 Sobic010G216800 Sobic010G216800 Sobic003G353000--Sobic010G216800 Sobic003G353000--Sobic010G274300 Sobic002G211501 Sobic002G211501 Sobic003G353000--Sobic002G211501 Sobic001G166500 Sobic001G166500 Sobic003G353000--Sobic001G166500 Sobic003G353000--Sobic004G105300 Sobic003G302466 Sobic003G302466 Sobic003G353000--Sobic003G302466 Sobic002G291132 Sobic002G291132 Sobic003G353000--Sobic002G291132 Sobic001G259300 Sobic001G259300 Sobic003G353000--Sobic001G259300 Sobic001G203100 Sobic001G203100 Sobic003G353000--Sobic001G203100 Sobic010G274300--Sobic010G216800 Sobic010G274300--Sobic002G211501 Sobic010G274300--Sobic004G105300 Sobic010G274300--Sobic001G166500 Sobic010G274300--Sobic002G291132 Sobic007G172800 Sobic007G172800 Sobic010G274300--Sobic007G172800 Sobic010G274300--Sobic003G302466 Sobic010G274300--Sobic001G203100 Sobic001G059800 Sobic001G059800 Sobic010G274300--Sobic001G059800 Sobic004G105300--Sobic010G274300 Sobic004G105300--Sobic001G166500 Sobic004G105300--Sobic003G302466 Sobic004G105300--Sobic001G203100 Sobic004G105300--Sobic007G172800 Sobic004G105300--Sobic002G211501 Sobic004G068000 Sobic004G068000 Sobic004G105300--Sobic004G068000 Sobic004G105300--Sobic010G216800 Sobic004G105300--Sobic002G291132 Sobic007G075301 Sobic007G075301 Sobic001G324700--Sobic007G075301 Sobic010G164100 Sobic010G164100 Sobic001G324700--Sobic010G164100 Sobic001G324700--Sobic003G242200 Sobic001G324700--Sobic003G438700 Sobic004G294500 Sobic004G294500 Sobic001G324700--Sobic004G294500 Sobic001G324700--Sobic001G166500 Sobic006G154300 Sobic006G154300 Sobic001G324700--Sobic006G154300 Sobic001G324700--Sobic007G036600 Sobic001G324700--Sobic009G010150 Sobic005G110421 Sobic005G110421 Sobic003G281600--Sobic005G110421 Sobic006G119600 Sobic006G119600 Sobic003G281600--Sobic006G119600 Sobic010G114300 Sobic010G114300 Sobic003G281600--Sobic010G114300 Sobic005G061000 Sobic005G061000 Sobic003G281600--Sobic005G061000 Sobic003G281600--Sobic006G081200 Sobic003G197300 Sobic003G197300 Sobic003G281600--Sobic003G197300 Sobic003G224200 Sobic003G224200 Sobic003G281600--Sobic003G224200 Sobic001G418600 Sobic001G418600 Sobic003G281600--Sobic001G418600 Sobic010G253500 Sobic010G253500 Sobic003G281600--Sobic010G253500 Sobic008G154400--Sobic001G326000 Sobic009G186400 Sobic009G186400 Sobic008G154400--Sobic009G186400 SobicK043500 SobicK043500 Sobic008G154400--SobicK043500 Sobic008G154400--Sobic006G059900 Sobic002G077500 Sobic002G077500 Sobic008G154400--Sobic002G077500 Sobic008G154400--Sobic003G105600 Sobic008G154400--Sobic003G438700 Sobic007G108000 Sobic007G108000 Sobic008G154400--Sobic007G108000 Sobic008G154400--Sobic004G313800
Octagon: transcription factors


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