Gene annotation
Transcriptome id Sobic.003G224200.2,Sobic.003G224200.1
Synonym Sb03g028250
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
protein kinase family protein, putative, expressed
UniProt C5XR52
Pfam PF00069 PF06760
Panther DB PTHR23257 PTHR23257:SF432
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G64300 : Protein kinase family protein
RAP-DB (Rice) LOC_Os01g43350.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036736 , Zm00025a038557
Brachypodium KQK08784 , KQK08785
Barley HORVU1Hr1G092840.1 , HORVU1Hr1G092840.2 , HORVU1Hr1G092840.3 , HORVU3Hr1G055620.6 , HORVU3Hr1G055620.5 , HORVU3Hr1G055620.4 , HORVU3Hr1G055620.3 , HORVU3Hr1G055620.1 , HORVU3Hr1G055620.2
Wheat TraesCS3D02G229200 , TraesCS3B02G253900 , TraesCS1D02G433900 , TraesCS3A02G224400 , TraesCS1B02G459300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G119600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@GRAM and C2 domains containing protein, putative, expressed -
2 Sobic.003G281600 lachrymatory factor synthase, putative, expressed -
3 Sobic.009G238600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
4 Sobic.005G061033 - -
5 Sobic.005G061000 ABC-2 type transporter domain containing protein, expressed -
6 Sobic.003G197300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AR791, putative, expressed -
7 Sobic.010G146500 RGH1A, putative, expressed -
8 Sobic.001G027800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
9 Sobic.010G114300 expressed protein -
10 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
11 Sobic.006G107400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
12 Sobic.004G256800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
13 Sobic.008G010900 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
14 Sobic.005G110421 - -
15 Sobic.006G116801 - -
16 Sobic.006G223800 ZOS8-01 - C2H2 zinc finger protein, expressed -
17 Sobic.003G289900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ENTH domain containing protein, expressed K12471: epsin
18 Sobic.001G168500 serpin domain containing protein, putative, expressed K13963: serpin B
19 Sobic.006G272700 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
20 Sobic.003G374600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBX31 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G224200 Sobic003G224200 Sobic006G119600 Sobic006G119600 Sobic003G224200--Sobic006G119600 Sobic003G281600 Sobic003G281600 Sobic003G224200--Sobic003G281600 Sobic009G238600 Sobic009G238600 Sobic003G224200--Sobic009G238600 Sobic005G061033 Sobic005G061033 Sobic003G224200--Sobic005G061033 Sobic005G061000 Sobic005G061000 Sobic003G224200--Sobic005G061000 Sobic003G197300 Sobic003G197300 Sobic003G224200--Sobic003G197300 Sobic010G146500 Sobic010G146500 Sobic003G224200--Sobic010G146500 Sobic001G027800 Sobic001G027800 Sobic003G224200--Sobic001G027800 Sobic010G114300 Sobic010G114300 Sobic003G224200--Sobic010G114300 Sobic006G119600--Sobic003G224200 Sobic006G119600--Sobic003G281600 Sobic006G119600--Sobic001G027800 Sobic003G374600 Sobic003G374600 Sobic006G119600--Sobic003G374600 Sobic006G119600--Sobic005G061000 Sobic006G119600--Sobic005G061033 Sobic006G272700 Sobic006G272700 Sobic006G119600--Sobic006G272700 Sobic009G118600 Sobic009G118600 Sobic006G119600--Sobic009G118600 Sobic005G215766 Sobic005G215766 Sobic006G119600--Sobic005G215766 Sobic005G110421 Sobic005G110421 Sobic003G281600--Sobic005G110421 Sobic003G281600--Sobic006G119600 Sobic003G281600--Sobic010G114300 Sobic003G281600--Sobic005G061000 Sobic006G081200 Sobic006G081200 Sobic003G281600--Sobic006G081200 Sobic003G281600--Sobic003G197300 Sobic003G281600--Sobic003G224200 Sobic001G418600 Sobic001G418600 Sobic003G281600--Sobic001G418600 Sobic010G253500 Sobic010G253500 Sobic003G281600--Sobic010G253500 Sobic002G171800 Sobic002G171800 Sobic009G238600--Sobic002G171800 Sobic009G238600--Sobic003G224200 Sobic004G032600 Sobic004G032600 Sobic009G238600--Sobic004G032600 Sobic006G067050 Sobic006G067050 Sobic009G238600--Sobic006G067050 Sobic006G017600 Sobic006G017600 Sobic009G238600--Sobic006G017600 Sobic006G223800 Sobic006G223800 Sobic009G238600--Sobic006G223800 Sobic003G035001 Sobic003G035001 Sobic009G238600--Sobic003G035001 Sobic009G238600--Sobic006G119600 Sobic002G037600 Sobic002G037600 Sobic009G238600--Sobic002G037600 Sobic005G061033--Sobic005G061000 Sobic001G237000 Sobic001G237000 Sobic005G061033--Sobic001G237000 Sobic005G061033--Sobic003G197300 Sobic005G061033--Sobic006G119600 Sobic004G256800 Sobic004G256800 Sobic005G061033--Sobic004G256800 Sobic001G206300 Sobic001G206300 Sobic005G061033--Sobic001G206300 Sobic001G502700 Sobic001G502700 Sobic005G061033--Sobic001G502700 Sobic002G225300 Sobic002G225300 Sobic005G061033--Sobic002G225300 Sobic005G061033--Sobic003G224200 Sobic005G061000--Sobic005G061033 Sobic002G037400 Sobic002G037400 Sobic005G061000--Sobic002G037400 Sobic007G143100 Sobic007G143100 Sobic005G061000--Sobic007G143100 Sobic001G155300 Sobic001G155300 Sobic005G061000--Sobic001G155300 Sobic005G016900 Sobic005G016900 Sobic005G061000--Sobic005G016900 Sobic003G397400 Sobic003G397400 Sobic005G061000--Sobic003G397400 Sobic007G169600 Sobic007G169600 Sobic005G061000--Sobic007G169600 Sobic007G143200 Sobic007G143200 Sobic005G061000--Sobic007G143200 Sobic002G325600 Sobic002G325600 Sobic005G061000--Sobic002G325600 Sobic003G197300--Sobic005G110421 Sobic003G197300--Sobic001G206300 Sobic003G197300--Sobic002G225300 Sobic001G510400 Sobic001G510400 Sobic003G197300--Sobic001G510400 Sobic003G197300--Sobic005G061033 Sobic002G185300 Sobic002G185300 Sobic003G197300--Sobic002G185300 Sobic003G289900 Sobic003G289900 Sobic003G197300--Sobic003G289900 Sobic003G197300--Sobic005G061000 Sobic003G197300--Sobic003G281600 Sobic008G087500 Sobic008G087500 Sobic010G146500--Sobic008G087500 Sobic004G101400 Sobic004G101400 Sobic010G146500--Sobic004G101400 Sobic006G116801 Sobic006G116801 Sobic010G146500--Sobic006G116801 Sobic006G104000 Sobic006G104000 Sobic010G146500--Sobic006G104000 Sobic010G146500--Sobic001G027800 Sobic001G354800 Sobic001G354800 Sobic010G146500--Sobic001G354800 Sobic001G307000 Sobic001G307000 Sobic010G146500--Sobic001G307000 Sobic008G087800 Sobic008G087800 Sobic010G146500--Sobic008G087800 Sobic003G244100 Sobic003G244100 Sobic010G146500--Sobic003G244100 Sobic001G027800--Sobic006G272700 Sobic001G210200 Sobic001G210200 Sobic001G027800--Sobic001G210200 Sobic010G114300--Sobic003G281600 Sobic010G114300--Sobic005G110421 Sobic010G114300--Sobic006G119600 Sobic010G114300--Sobic003G224200 Sobic010G114300--Sobic006G223800 Sobic010G114300--Sobic006G081200 Sobic010G114300--Sobic003G197300 Sobic010G114300--Sobic009G238600 Sobic007G150500 Sobic007G150500 Sobic010G114300--Sobic007G150500
Octagon: transcription factors


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