Gene annotation
Transcriptome id Sobic.010G146500.1
Synonym Sb10g019620
Functional annotation RGH1A, putative, expressed
UniProt A0A194YJB6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF484
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46730 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g43700.1 : RGH1A, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G146500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G087500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
2 Sobic.004G101400 Up-reguralion under drought(PubMedID : 24916767)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
3 Sobic.006G116801 - -
4 Sobic.006G104000 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
5 Sobic.001G027800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
6 Sobic.001G354800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G307000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.008G087800 expressed protein -
9 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
10 Sobic.001G409400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed -
11 Sobic.006G272700 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
12 Sobic.002G172000 similar to Os09g0325700 protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
13 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -
14 Sobic.001G109000 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
15 Sobic.002G164960 - -
16 Sobic.003G224200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
17 Sobic.001G070401 - -
18 Sobic.003G424600 - -
19 Sobic.002G038733 - -
20 Sobic.006G119600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@GRAM and C2 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G146500 Sobic010G146500 Sobic008G087500 Sobic008G087500 Sobic010G146500--Sobic008G087500 Sobic004G101400 Sobic004G101400 Sobic010G146500--Sobic004G101400 Sobic006G116801 Sobic006G116801 Sobic010G146500--Sobic006G116801 Sobic006G104000 Sobic006G104000 Sobic010G146500--Sobic006G104000 Sobic001G027800 Sobic001G027800 Sobic010G146500--Sobic001G027800 Sobic001G354800 Sobic001G354800 Sobic010G146500--Sobic001G354800 Sobic001G307000 Sobic001G307000 Sobic010G146500--Sobic001G307000 Sobic008G087800 Sobic008G087800 Sobic010G146500--Sobic008G087800 Sobic003G244100 Sobic003G244100 Sobic010G146500--Sobic003G244100 Sobic008G087500--Sobic010G146500 Sobic008G087500--Sobic003G244100 Sobic002G164960 Sobic002G164960 Sobic008G087500--Sobic002G164960 Sobic008G087500--Sobic006G116801 Sobic001G424000 Sobic001G424000 Sobic008G087500--Sobic001G424000 Sobic001G409400 Sobic001G409400 Sobic008G087500--Sobic001G409400 Sobic002G075800 Sobic002G075800 Sobic008G087500--Sobic002G075800 Sobic008G087500--Sobic004G101400 Sobic008G087500--Sobic008G087800 Sobic004G101400--Sobic001G409400 Sobic002G107400 Sobic002G107400 Sobic004G101400--Sobic002G107400 Sobic009G046200 Sobic009G046200 Sobic004G101400--Sobic009G046200 Sobic004G101400--Sobic006G104000 Sobic009G015500 Sobic009G015500 Sobic004G101400--Sobic009G015500 Sobic009G158600 Sobic009G158600 Sobic004G101400--Sobic009G158600 Sobic003G011400 Sobic003G011400 Sobic004G101400--Sobic003G011400 Sobic009G006500 Sobic009G006500 Sobic004G101400--Sobic009G006500 Sobic004G101400--Sobic003G244100 Sobic006G116801--Sobic003G244100 Sobic006G116801--Sobic001G409400 Sobic006G116801--Sobic006G104000 Sobic006G116801--Sobic009G046200 Sobic006G116801--Sobic008G087500 Sobic002G097000 Sobic002G097000 Sobic006G116801--Sobic002G097000 Sobic006G116801--Sobic010G146500 Sobic006G116801--Sobic001G424000 Sobic005G082860 Sobic005G082860 Sobic006G116801--Sobic005G082860 Sobic006G104000--Sobic009G046200 Sobic002G132500 Sobic002G132500 Sobic006G104000--Sobic002G132500 Sobic006G104000--Sobic003G011400 Sobic003G024600 Sobic003G024600 Sobic006G104000--Sobic003G024600 Sobic001G466450 Sobic001G466450 Sobic006G104000--Sobic001G466450 Sobic006G272700 Sobic006G272700 Sobic001G027800--Sobic006G272700 Sobic001G210200 Sobic001G210200 Sobic001G027800--Sobic001G210200 Sobic001G109000 Sobic001G109000 Sobic001G354800--Sobic001G109000 Sobic001G492000 Sobic001G492000 Sobic001G354800--Sobic001G492000 Sobic009G168800 Sobic009G168800 Sobic001G354800--Sobic009G168800 Sobic004G142500 Sobic004G142500 Sobic001G354800--Sobic004G142500 Sobic002G151200 Sobic002G151200 Sobic001G354800--Sobic002G151200 Sobic006G269501 Sobic006G269501 Sobic001G354800--Sobic006G269501 Sobic001G354800--Sobic001G307000 Sobic005G138500 Sobic005G138500 Sobic001G354800--Sobic005G138500 Sobic009G215700 Sobic009G215700 Sobic001G354800--Sobic009G215700 Sobic004G047900 Sobic004G047900 Sobic001G307000--Sobic004G047900 Sobic003G292400 Sobic003G292400 Sobic001G307000--Sobic003G292400 Sobic003G194400 Sobic003G194400 Sobic001G307000--Sobic003G194400 Sobic010G101300 Sobic010G101300 Sobic001G307000--Sobic010G101300 Sobic001G200700 Sobic001G200700 Sobic001G307000--Sobic001G200700 Sobic004G243300 Sobic004G243300 Sobic001G307000--Sobic004G243300 Sobic006G114700 Sobic006G114700 Sobic001G307000--Sobic006G114700 Sobic001G307000--Sobic006G104000 Sobic001G307000--Sobic003G011400 Sobic008G087800--Sobic010G146500 Sobic008G087800--Sobic008G087500 Sobic002G038733 Sobic002G038733 Sobic008G087800--Sobic002G038733 Sobic002G172000 Sobic002G172000 Sobic008G087800--Sobic002G172000 Sobic009G081700 Sobic009G081700 Sobic008G087800--Sobic009G081700 Sobic003G417500 Sobic003G417500 Sobic008G087800--Sobic003G417500 Sobic005G062500 Sobic005G062500 Sobic008G087800--Sobic005G062500 Sobic008G087800--Sobic003G244100 Sobic008G087800--Sobic004G101400 Sobic002G141800 Sobic002G141800 Sobic003G244100--Sobic002G141800 Sobic009G116700 Sobic009G116700 Sobic003G244100--Sobic009G116700 Sobic003G244100--Sobic009G046200 Sobic003G244100--Sobic001G409400 Sobic003G244100--Sobic006G104000 Sobic003G244100--Sobic003G011400 Sobic003G244100--Sobic002G097000 Sobic001G373600 Sobic001G373600 Sobic003G244100--Sobic001G373600 Sobic003G244100--Sobic001G466450
Octagon: transcription factors


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