Gene annotation
| Transcriptome id | Sobic.002G164960.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1W0W4B4 |
| Pfam | - |
| Panther DB | - |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | - |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G087500 | Up-reguralion under drought(PubMedID : 24916767)@expressed protein | - |
| 2 | Sobic.009G072200 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed | - |
| 3 | Sobic.002G075800 | Up-reguralion under drought(PubMedID : 24916767)@uncharacterized glycosyltransferase, putative, expressed | K06617: raffinose synthase |
| 4 | Sobic.001G070401 | - | - |
| 5 | Sobic.003G244100 | "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed | K09060: plant G-box-binding factor |
| 6 | Sobic.010G146500 | RGH1A, putative, expressed | - |
| 7 | Sobic.002G173800 | hydroxyproline-rich glycoprotein family protein, putative, expressed | - |
| 8 | Sobic.009G222000 | LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 9 | Sobic.002G141800 | expressed protein | - |
| 10 | Sobic.007G152800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed | K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase |
| 11 | Sobic.004G101400 | Up-reguralion under drought(PubMedID : 24916767)@HSF-type DNA-binding domain containing protein, expressed | K09419: heat shock transcription factor, other eukaryote |
| 12 | Sobic.009G257700 | N-rich protein, putative, expressed | - |
| 13 | Sobic.001G424000 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fringe-related protein, putative, expressed | - |
| 14 | Sobic.001G012700 | regulatory protein, putative, expressed | - |
| 15 | Sobic.006G116801 | - | - |
| 16 | Sobic.002G020900 | GCRP5 - Glycine and cysteine rich family protein precursor, expressed | - |
| 17 | Sobic.001G409400 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed | - |
| 18 | Sobic.006G104000 | ethylene-insensitive 3, putative, expressed | K14514: ethylene-insensitive protein 3 |
| 19 | Sobic.005G224500 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@xylanase inhibitor, putative, expressed | - |
| 20 | Sobic.009G116700 | "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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