Gene annotation
Transcriptome id Sobic.002G020900.1
Synonym Sb02g001940
Functional annotation GCRP5 - Glycine and cysteine rich family protein precursor, expressed
UniProt C5X8P1
Pfam -
Panther DB PTHR34789 PTHR34789:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61255 : -
RAP-DB (Rice) LOC_Os07g03180.1 : GCRP3 - Glycine and cysteine rich family protein precursor, expressed
MaizeGDB (Corn) Zm00025a044944
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G020900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.002G292600 phytoene synthase(PubMedID : 22672222)@carotenoid biosynthesi(PubMedID : 18162592)@PSY3 expression influences root carotenogenesis and defines a potential bottleneck upstream of NCED(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
3 Sobic.003G414600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
4 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
5 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
6 Sobic.001G012800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulatory protein, putative, expressed -
7 Sobic.009G213700 - -
8 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
9 Sobic.007G225300 2-nitropropane dioxygenase family, putative, expressed -
10 Sobic.009G257700 N-rich protein, putative, expressed -
11 Sobic.001G048900 EF hand family protein, putative, expressed -
12 Sobic.007G107600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
13 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
15 Sobic.009G213600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@green ripe-like, putative, expressed -
16 Sobic.003G019700 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
18 Sobic.010G161450 - -
19 Sobic.005G211400 cytochrome P450, putative, expressed -
20 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G020900 Sobic002G020900 Sobic010G236500 Sobic010G236500 Sobic002G020900--Sobic010G236500 Sobic002G292600 Sobic002G292600 Sobic002G020900--Sobic002G292600 Sobic003G414600 Sobic003G414600 Sobic002G020900--Sobic003G414600 Sobic004G145200 Sobic004G145200 Sobic002G020900--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic002G020900--Sobic009G241700 Sobic001G012800 Sobic001G012800 Sobic002G020900--Sobic001G012800 Sobic009G213700 Sobic009G213700 Sobic002G020900--Sobic009G213700 Sobic005G195600 Sobic005G195600 Sobic002G020900--Sobic005G195600 Sobic007G225300 Sobic007G225300 Sobic002G020900--Sobic007G225300 Sobic006G076201 Sobic006G076201 Sobic010G236500--Sobic006G076201 Sobic010G236500--Sobic004G145200 Sobic003G095400 Sobic003G095400 Sobic010G236500--Sobic003G095400 Sobic003G294400 Sobic003G294400 Sobic010G236500--Sobic003G294400 Sobic010G236500--Sobic001G012800 Sobic006G064800 Sobic006G064800 Sobic010G236500--Sobic006G064800 Sobic001G409900 Sobic001G409900 Sobic010G236500--Sobic001G409900 Sobic006G087900 Sobic006G087900 Sobic010G236500--Sobic006G087900 Sobic010G236500--Sobic009G241700 Sobic002G292600--Sobic004G145200 Sobic003G356700 Sobic003G356700 Sobic002G292600--Sobic003G356700 Sobic003G424500 Sobic003G424500 Sobic002G292600--Sobic003G424500 Sobic003G056500 Sobic003G056500 Sobic002G292600--Sobic003G056500 Sobic006G218700 Sobic006G218700 Sobic002G292600--Sobic006G218700 Sobic001G403600 Sobic001G403600 Sobic002G292600--Sobic001G403600 Sobic002G119800 Sobic002G119800 Sobic002G292600--Sobic002G119800 Sobic007G011000 Sobic007G011000 Sobic002G292600--Sobic007G011000 Sobic001G342600 Sobic001G342600 Sobic002G292600--Sobic001G342600 Sobic009G213600 Sobic009G213600 Sobic003G414600--Sobic009G213600 Sobic004G222600 Sobic004G222600 Sobic003G414600--Sobic004G222600 Sobic007G150000 Sobic007G150000 Sobic003G414600--Sobic007G150000 Sobic001G230900 Sobic001G230900 Sobic003G414600--Sobic001G230900 Sobic003G414600--Sobic009G213700 Sobic007G092100 Sobic007G092100 Sobic003G414600--Sobic007G092100 Sobic010G238700 Sobic010G238700 Sobic003G414600--Sobic010G238700 Sobic003G217100 Sobic003G217100 Sobic003G414600--Sobic003G217100 Sobic003G414600--Sobic002G020900 Sobic010G228000 Sobic010G228000 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic007G188100 Sobic007G188100 Sobic004G145200--Sobic007G188100 Sobic004G145200--Sobic006G076201 Sobic010G062800 Sobic010G062800 Sobic004G145200--Sobic010G062800 Sobic002G362900 Sobic002G362900 Sobic004G145200--Sobic002G362900 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic002G118600 Sobic002G118600 Sobic004G145200--Sobic002G118600 Sobic010G107100 Sobic010G107100 Sobic009G241700--Sobic010G107100 Sobic005G211400 Sobic005G211400 Sobic009G241700--Sobic005G211400 Sobic004G058000 Sobic004G058000 Sobic009G241700--Sobic004G058000 Sobic004G158901 Sobic004G158901 Sobic009G241700--Sobic004G158901 Sobic007G098400 Sobic007G098400 Sobic009G241700--Sobic007G098400 Sobic001G403700 Sobic001G403700 Sobic009G241700--Sobic001G403700 Sobic001G399100 Sobic001G399100 Sobic009G241700--Sobic001G399100 Sobic009G241700--Sobic001G012800 Sobic009G111600 Sobic009G111600 Sobic009G241700--Sobic009G111600 Sobic001G012800--Sobic002G118600 Sobic001G012800--Sobic004G145200 Sobic001G012800--Sobic009G241700 Sobic009G220200 Sobic009G220200 Sobic001G012800--Sobic009G220200 Sobic001G012800--Sobic007G188100 Sobic004G259500 Sobic004G259500 Sobic001G012800--Sobic004G259500 Sobic001G012800--Sobic003G294400 Sobic001G012800--Sobic002G362900 Sobic007G006600 Sobic007G006600 Sobic001G012800--Sobic007G006600 Sobic009G213700--Sobic009G213600 Sobic009G213700--Sobic003G414600 Sobic009G213700--Sobic001G230900 Sobic001G090000 Sobic001G090000 Sobic009G213700--Sobic001G090000 Sobic001G187000 Sobic001G187000 Sobic009G213700--Sobic001G187000 Sobic001G516500 Sobic001G516500 Sobic009G213700--Sobic001G516500 Sobic009G157900 Sobic009G157900 Sobic009G213700--Sobic009G157900 Sobic002G258100 Sobic002G258100 Sobic009G213700--Sobic002G258100 Sobic003G343900 Sobic003G343900 Sobic009G213700--Sobic003G343900 Sobic006G191100 Sobic006G191100 Sobic005G195600--Sobic006G191100 Sobic005G195600--Sobic006G076201 Sobic005G195600--Sobic006G064800 Sobic005G195600--Sobic006G087900 Sobic003G278700 Sobic003G278700 Sobic005G195600--Sobic003G278700 Sobic002G325900 Sobic002G325900 Sobic005G195600--Sobic002G325900 Sobic004G172100 Sobic004G172100 Sobic005G195600--Sobic004G172100 Sobic005G195600--Sobic004G145200 Sobic005G195600--Sobic007G225300 Sobic003G353400 Sobic003G353400 Sobic007G225300--Sobic003G353400 Sobic007G225300--Sobic005G195600 Sobic003G052400 Sobic003G052400 Sobic007G225300--Sobic003G052400 Sobic004G337900 Sobic004G337900 Sobic007G225300--Sobic004G337900 Sobic007G148700 Sobic007G148700 Sobic007G225300--Sobic007G148700 Sobic009G229300 Sobic009G229300 Sobic007G225300--Sobic009G229300 Sobic009G182200 Sobic009G182200 Sobic007G225300--Sobic009G182200 Sobic003G319000 Sobic003G319000 Sobic007G225300--Sobic003G319000 Sobic001G237500 Sobic001G237500 Sobic007G225300--Sobic001G237500
Octagon: transcription factors


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