Gene annotation
Transcriptome id Sobic.007G107600.1
Synonym Sb07g015090
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
calmodulin binding protein, putative, expressed
UniProt C5YK97
Pfam PF07887
Panther DB PTHR31713 PTHR31713:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0005516calmodulin binding


Orthologs (automatic annotation)
TAIR AT2G18750 : Calmodulin-binding protein
RAP-DB (Rice) LOC_Os08g27170.1 : calmodulin binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a006182
Brachypodium KQJ96246 , PNT67165
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
2 Sobic.010G175200 low-affinity cation transporter, putative, expressed -
3 Sobic.001G012800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulatory protein, putative, expressed -
4 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.002G188700 armadillo/beta-catenin repeat family protein, putative, expressed -
6 Sobic.003G348700 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.002G012800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.004G042600 protein kinase domain containing protein, expressed -
9 Sobic.009G057400 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
10 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
11 Sobic.004G232201 - -
12 Sobic.002G020900 GCRP5 - Glycine and cysteine rich family protein precursor, expressed -
13 Sobic.004G195300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
15 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
16 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
17 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
18 Sobic.010G161450 - -
19 Sobic.006G169000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ThiF family domain containing protein, putative, expressed K11996: MOCS3, adenylyltransferase and sulfurtransferase
20 Sobic.006G076201 - -


Gene co-expression network
sample Sobic007G107600 Sobic007G107600 Sobic004G268700 Sobic004G268700 Sobic007G107600--Sobic004G268700 Sobic010G175200 Sobic010G175200 Sobic007G107600--Sobic010G175200 Sobic001G012800 Sobic001G012800 Sobic007G107600--Sobic001G012800 Sobic010G236500 Sobic010G236500 Sobic007G107600--Sobic010G236500 Sobic002G188700 Sobic002G188700 Sobic007G107600--Sobic002G188700 Sobic003G348700 Sobic003G348700 Sobic007G107600--Sobic003G348700 Sobic002G012800 Sobic002G012800 Sobic007G107600--Sobic002G012800 Sobic004G042600 Sobic004G042600 Sobic007G107600--Sobic004G042600 Sobic009G057400 Sobic009G057400 Sobic007G107600--Sobic009G057400 Sobic004G268700--Sobic002G188700 Sobic009G167000 Sobic009G167000 Sobic004G268700--Sobic009G167000 Sobic001G482700 Sobic001G482700 Sobic004G268700--Sobic001G482700 Sobic002G021300 Sobic002G021300 Sobic004G268700--Sobic002G021300 Sobic008G036000 Sobic008G036000 Sobic004G268700--Sobic008G036000 Sobic004G300300 Sobic004G300300 Sobic004G268700--Sobic004G300300 Sobic009G030600 Sobic009G030600 Sobic004G268700--Sobic009G030600 Sobic003G424500 Sobic003G424500 Sobic004G268700--Sobic003G424500 Sobic010G200700 Sobic010G200700 Sobic004G268700--Sobic010G200700 Sobic004G297200 Sobic004G297200 Sobic010G175200--Sobic004G297200 Sobic010G175200--Sobic004G042600 Sobic006G078400 Sobic006G078400 Sobic010G175200--Sobic006G078400 Sobic009G044400 Sobic009G044400 Sobic010G175200--Sobic009G044400 Sobic003G341100 Sobic003G341100 Sobic010G175200--Sobic003G341100 Sobic010G175200--Sobic010G200700 Sobic003G363200 Sobic003G363200 Sobic010G175200--Sobic003G363200 Sobic003G158600 Sobic003G158600 Sobic010G175200--Sobic003G158600 Sobic010G078600 Sobic010G078600 Sobic010G175200--Sobic010G078600 Sobic002G118600 Sobic002G118600 Sobic001G012800--Sobic002G118600 Sobic004G145200 Sobic004G145200 Sobic001G012800--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic001G012800--Sobic009G241700 Sobic009G220200 Sobic009G220200 Sobic001G012800--Sobic009G220200 Sobic007G188100 Sobic007G188100 Sobic001G012800--Sobic007G188100 Sobic004G259500 Sobic004G259500 Sobic001G012800--Sobic004G259500 Sobic003G294400 Sobic003G294400 Sobic001G012800--Sobic003G294400 Sobic002G362900 Sobic002G362900 Sobic001G012800--Sobic002G362900 Sobic007G006600 Sobic007G006600 Sobic001G012800--Sobic007G006600 Sobic006G076201 Sobic006G076201 Sobic010G236500--Sobic006G076201 Sobic010G236500--Sobic004G145200 Sobic003G095400 Sobic003G095400 Sobic010G236500--Sobic003G095400 Sobic010G236500--Sobic003G294400 Sobic010G236500--Sobic001G012800 Sobic006G064800 Sobic006G064800 Sobic010G236500--Sobic006G064800 Sobic001G409900 Sobic001G409900 Sobic010G236500--Sobic001G409900 Sobic006G087900 Sobic006G087900 Sobic010G236500--Sobic006G087900 Sobic010G236500--Sobic009G241700 Sobic002G188700--Sobic004G268700 Sobic002G188700--Sobic009G167000 Sobic002G188700--Sobic002G021300 Sobic002G188700--Sobic004G300300 Sobic003G082000 Sobic003G082000 Sobic002G188700--Sobic003G082000 Sobic008G058900 Sobic008G058900 Sobic002G188700--Sobic008G058900 Sobic009G076500 Sobic009G076500 Sobic002G188700--Sobic009G076500 Sobic006G208100 Sobic006G208100 Sobic002G188700--Sobic006G208100 Sobic010G201200 Sobic010G201200 Sobic002G188700--Sobic010G201200 Sobic003G348700--Sobic002G012800 Sobic003G146000 Sobic003G146000 Sobic003G348700--Sobic003G146000 Sobic003G348700--Sobic006G208100 Sobic009G142200 Sobic009G142200 Sobic003G348700--Sobic009G142200 Sobic003G348700--Sobic008G058900 Sobic002G135800 Sobic002G135800 Sobic003G348700--Sobic002G135800 Sobic003G348700--Sobic003G363200 Sobic003G348700--Sobic002G188700 Sobic010G182966 Sobic010G182966 Sobic003G348700--Sobic010G182966 Sobic002G012800--Sobic003G348700 Sobic002G012800--Sobic006G208100 Sobic002G012800--Sobic010G201200 Sobic001G027800 Sobic001G027800 Sobic002G012800--Sobic001G027800 Sobic001G210200 Sobic001G210200 Sobic002G012800--Sobic001G210200 Sobic004G042600--Sobic010G200700 Sobic004G042600--Sobic004G297200 Sobic002G080000 Sobic002G080000 Sobic004G042600--Sobic002G080000 Sobic004G042600--Sobic010G175200 Sobic006G228300 Sobic006G228300 Sobic004G042600--Sobic006G228300 Sobic004G042600--Sobic003G363200 Sobic002G219200 Sobic002G219200 Sobic004G042600--Sobic002G219200 Sobic004G042600--Sobic006G078400 Sobic003G429300 Sobic003G429300 Sobic004G042600--Sobic003G429300 Sobic009G057400--Sobic002G219200 Sobic009G057400--Sobic006G208100 Sobic009G057400--Sobic009G167000 Sobic009G057400--Sobic003G082000 Sobic009G057400--Sobic002G188700 Sobic009G057400--Sobic003G363200 Sobic003G268900 Sobic003G268900 Sobic009G057400--Sobic003G268900 Sobic001G028000 Sobic001G028000 Sobic009G057400--Sobic001G028000 Sobic009G057400--Sobic002G012800
Octagon: transcription factors


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