Gene annotation
Transcriptome id Sobic.006G076201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RD77
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
2 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
3 Sobic.002G325900 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
6 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
7 Sobic.003G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
9 Sobic.002G362900 IBS1, putative, expressed -
10 Sobic.003G049300 expressed protein -
11 Sobic.005G211400 cytochrome P450, putative, expressed -
12 Sobic.005G231700 ZOS7-01 - C2H2 zinc finger protein, expressed -
13 Sobic.001G012800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulatory protein, putative, expressed -
14 Sobic.003G294400 VQ domain containing protein, putative, expressed -
15 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
16 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
17 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
18 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.003G296700 protein kinase domain containing protein, expressed -
20 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -


Gene co-expression network
sample Sobic006G076201 Sobic006G076201 Sobic006G087900 Sobic006G087900 Sobic006G076201--Sobic006G087900 Sobic004G145200 Sobic004G145200 Sobic006G076201--Sobic004G145200 Sobic002G325900 Sobic002G325900 Sobic006G076201--Sobic002G325900 Sobic010G236500 Sobic010G236500 Sobic006G076201--Sobic010G236500 Sobic005G195600 Sobic005G195600 Sobic006G076201--Sobic005G195600 Sobic006G191100 Sobic006G191100 Sobic006G076201--Sobic006G191100 Sobic003G016600 Sobic003G016600 Sobic006G076201--Sobic003G016600 Sobic002G242500 Sobic002G242500 Sobic006G076201--Sobic002G242500 Sobic002G362900 Sobic002G362900 Sobic006G076201--Sobic002G362900 Sobic005G231700 Sobic005G231700 Sobic006G087900--Sobic005G231700 Sobic006G087900--Sobic002G362900 Sobic003G296700 Sobic003G296700 Sobic006G087900--Sobic003G296700 Sobic001G063600 Sobic001G063600 Sobic006G087900--Sobic001G063600 Sobic006G087900--Sobic006G076201 Sobic010G080400 Sobic010G080400 Sobic006G087900--Sobic010G080400 Sobic006G087900--Sobic002G325900 Sobic001G051800 Sobic001G051800 Sobic006G087900--Sobic001G051800 Sobic009G220200 Sobic009G220200 Sobic006G087900--Sobic009G220200 Sobic010G228000 Sobic010G228000 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic007G188100 Sobic007G188100 Sobic004G145200--Sobic007G188100 Sobic004G145200--Sobic006G076201 Sobic010G062800 Sobic010G062800 Sobic004G145200--Sobic010G062800 Sobic004G145200--Sobic002G362900 Sobic001G012800 Sobic001G012800 Sobic004G145200--Sobic001G012800 Sobic004G145200--Sobic002G242500 Sobic002G118600 Sobic002G118600 Sobic004G145200--Sobic002G118600 Sobic002G325900--Sobic005G231700 Sobic002G325900--Sobic006G087900 Sobic003G278700 Sobic003G278700 Sobic002G325900--Sobic003G278700 Sobic002G325900--Sobic001G063600 Sobic002G325900--Sobic006G076201 Sobic002G325900--Sobic010G080400 Sobic002G325900--Sobic003G016600 Sobic009G002400 Sobic009G002400 Sobic002G325900--Sobic009G002400 Sobic002G372800 Sobic002G372800 Sobic002G325900--Sobic002G372800 Sobic010G236500--Sobic006G076201 Sobic010G236500--Sobic004G145200 Sobic003G095400 Sobic003G095400 Sobic010G236500--Sobic003G095400 Sobic003G294400 Sobic003G294400 Sobic010G236500--Sobic003G294400 Sobic010G236500--Sobic001G012800 Sobic006G064800 Sobic006G064800 Sobic010G236500--Sobic006G064800 Sobic001G409900 Sobic001G409900 Sobic010G236500--Sobic001G409900 Sobic010G236500--Sobic006G087900 Sobic009G241700 Sobic009G241700 Sobic010G236500--Sobic009G241700 Sobic005G195600--Sobic006G191100 Sobic005G195600--Sobic006G076201 Sobic005G195600--Sobic006G064800 Sobic005G195600--Sobic006G087900 Sobic005G195600--Sobic003G278700 Sobic005G195600--Sobic002G325900 Sobic004G172100 Sobic004G172100 Sobic005G195600--Sobic004G172100 Sobic005G195600--Sobic004G145200 Sobic007G225300 Sobic007G225300 Sobic005G195600--Sobic007G225300 Sobic006G191100--Sobic005G195600 Sobic006G191100--Sobic006G087900 Sobic006G191100--Sobic006G076201 Sobic006G191100--Sobic002G362900 Sobic010G069900 Sobic010G069900 Sobic006G191100--Sobic010G069900 Sobic006G191100--Sobic003G016600 Sobic003G227700 Sobic003G227700 Sobic006G191100--Sobic003G227700 Sobic001G113700 Sobic001G113700 Sobic006G191100--Sobic001G113700 Sobic007G221100 Sobic007G221100 Sobic006G191100--Sobic007G221100 Sobic003G016600--Sobic006G087900 Sobic003G016600--Sobic006G076201 Sobic003G016600--Sobic006G191100 Sobic003G016600--Sobic002G325900 Sobic003G016600--Sobic010G069900 Sobic003G016600--Sobic003G294400 Sobic003G019700 Sobic003G019700 Sobic003G016600--Sobic003G019700 Sobic003G016600--Sobic001G012800 Sobic003G016600--Sobic002G362900 Sobic002G294200 Sobic002G294200 Sobic002G242500--Sobic002G294200 Sobic007G098400 Sobic007G098400 Sobic002G242500--Sobic007G098400 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic001G049200 Sobic001G049200 Sobic002G242500--Sobic001G049200 Sobic003G167500 Sobic003G167500 Sobic002G242500--Sobic003G167500 Sobic002G242500--Sobic007G221100 Sobic001G403700 Sobic001G403700 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic002G362900--Sobic007G188100 Sobic002G362900--Sobic006G087900 Sobic002G362900--Sobic009G220200 Sobic009G208800 Sobic009G208800 Sobic002G362900--Sobic009G208800 Sobic002G362900--Sobic004G145200 Sobic002G362900--Sobic005G231700 Sobic002G362900--Sobic008G016900 Sobic002G362900--Sobic010G228000 Sobic002G362900--Sobic001G409900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.