Gene annotation
Transcriptome id Sobic.001G012800.2,Sobic.001G012800.1
Synonym Sb01g001260
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
regulatory protein, putative, expressed
UniProt A0A1B6QGR7 , A0A1Z5S3W8
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF807
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os03g63270.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a039293 , Zm00025a039296 , Zm00025a016331 , Zm00025a026259
Brachypodium KQK12124 , PNT73794 , PNT73795
Barley HORVU3Hr1G094340.1 , HORVU3Hr1G094340.4 , HORVU5Hr1G121570.9 , HORVU5Hr1G121570.8 , HORVU5Hr1G121570.5 , HORVU5Hr1G121570.4 , HORVU5Hr1G121570.7 , HORVU5Hr1G121570.6 , HORVU5Hr1G121570.1 , HORVU5Hr1G121570.3 , HORVU5Hr1G121570.2 , HORVU3Hr1G094340.3 , HORVU3Hr1G094340.2 , HORVU3Hr1G094250.8 , HORVU3Hr1G094250.5 , HORVU3Hr1G094250.4 , HORVU3Hr1G094250.6 , HORVU3Hr1G094250.1 , HORVU3Hr1G094250.3 , HORVU3Hr1G094250.2
Wheat TraesCS4A02G339900 , TraesCS3D02G424000 , TraesCS5B02G549500 , TraesCS1D02G328100 , TraesCS5D02G536500 , TraesCS3A02G428300 , TraesCS5B02G549500 , TraesCS3B02G465400 , TraesCS3A02G428200 , TraesCS3D02G424000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
2 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
3 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
4 Sobic.009G220200 exostosin family domain containing protein, expressed -
5 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
6 Sobic.004G259500 expressed protein -
7 Sobic.003G294400 VQ domain containing protein, putative, expressed -
8 Sobic.002G362900 IBS1, putative, expressed -
9 Sobic.007G006600 expressed protein -
10 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
11 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.001G113700 cytochrome b561, putative, expressed K08360: cytochrome b-561
13 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
14 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
15 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
17 Sobic.003G296700 protein kinase domain containing protein, expressed -
18 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
19 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
20 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic001G012800 Sobic001G012800 Sobic002G118600 Sobic002G118600 Sobic001G012800--Sobic002G118600 Sobic004G145200 Sobic004G145200 Sobic001G012800--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic001G012800--Sobic009G241700 Sobic009G220200 Sobic009G220200 Sobic001G012800--Sobic009G220200 Sobic007G188100 Sobic007G188100 Sobic001G012800--Sobic007G188100 Sobic004G259500 Sobic004G259500 Sobic001G012800--Sobic004G259500 Sobic003G294400 Sobic003G294400 Sobic001G012800--Sobic003G294400 Sobic002G362900 Sobic002G362900 Sobic001G012800--Sobic002G362900 Sobic007G006600 Sobic007G006600 Sobic001G012800--Sobic007G006600 Sobic001G147200 Sobic001G147200 Sobic002G118600--Sobic001G147200 Sobic001G341600 Sobic001G341600 Sobic002G118600--Sobic001G341600 Sobic003G341100 Sobic003G341100 Sobic002G118600--Sobic003G341100 Sobic010G228000 Sobic010G228000 Sobic002G118600--Sobic010G228000 Sobic002G374100 Sobic002G374100 Sobic002G118600--Sobic002G374100 Sobic001G290400 Sobic001G290400 Sobic002G118600--Sobic001G290400 Sobic007G011000 Sobic007G011000 Sobic002G118600--Sobic007G011000 Sobic001G538866 Sobic001G538866 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic004G145200--Sobic007G188100 Sobic006G076201 Sobic006G076201 Sobic004G145200--Sobic006G076201 Sobic010G062800 Sobic010G062800 Sobic004G145200--Sobic010G062800 Sobic004G145200--Sobic002G362900 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic004G145200--Sobic002G118600 Sobic010G107100 Sobic010G107100 Sobic009G241700--Sobic010G107100 Sobic005G211400 Sobic005G211400 Sobic009G241700--Sobic005G211400 Sobic004G058000 Sobic004G058000 Sobic009G241700--Sobic004G058000 Sobic004G158901 Sobic004G158901 Sobic009G241700--Sobic004G158901 Sobic007G098400 Sobic007G098400 Sobic009G241700--Sobic007G098400 Sobic001G403700 Sobic001G403700 Sobic009G241700--Sobic001G403700 Sobic001G399100 Sobic001G399100 Sobic009G241700--Sobic001G399100 Sobic009G241700--Sobic001G012800 Sobic009G111600 Sobic009G111600 Sobic009G241700--Sobic009G111600 Sobic009G208800 Sobic009G208800 Sobic009G220200--Sobic009G208800 Sobic003G296700 Sobic003G296700 Sobic009G220200--Sobic003G296700 Sobic001G051800 Sobic001G051800 Sobic009G220200--Sobic001G051800 Sobic001G516600 Sobic001G516600 Sobic009G220200--Sobic001G516600 Sobic001G173300 Sobic001G173300 Sobic009G220200--Sobic001G173300 Sobic004G257300 Sobic004G257300 Sobic009G220200--Sobic004G257300 Sobic009G220200--Sobic002G374100 Sobic009G220200--Sobic002G362900 Sobic009G220200--Sobic007G188100 Sobic007G188100--Sobic010G228000 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic007G188100--Sobic002G374100 Sobic007G188100--Sobic004G259500 Sobic007G188100--Sobic008G016900 Sobic002G330300 Sobic002G330300 Sobic007G188100--Sobic002G330300 Sobic007G188100--Sobic010G062800 Sobic007G188100--Sobic002G118600 Sobic004G259500--Sobic007G188100 Sobic009G171100 Sobic009G171100 Sobic004G259500--Sobic009G171100 Sobic004G259500--Sobic002G353400 Sobic003G425200 Sobic003G425200 Sobic004G259500--Sobic003G425200 Sobic004G259500--Sobic003G294400 Sobic001G525400 Sobic001G525400 Sobic004G259500--Sobic001G525400 Sobic002G379400 Sobic002G379400 Sobic004G259500--Sobic002G379400 Sobic004G259500--Sobic008G016900 Sobic004G278000 Sobic004G278000 Sobic004G259500--Sobic004G278000 Sobic003G294400--Sobic004G259500 Sobic003G294400--Sobic002G362900 Sobic003G294400--Sobic005G211400 Sobic003G294400--Sobic004G145200 Sobic003G294400--Sobic001G012800 Sobic003G294400--Sobic007G188100 Sobic010G236500 Sobic010G236500 Sobic003G294400--Sobic010G236500 Sobic003G294400--Sobic003G296700 Sobic003G294400--Sobic009G220200 Sobic002G362900--Sobic007G188100 Sobic006G087900 Sobic006G087900 Sobic002G362900--Sobic006G087900 Sobic002G362900--Sobic009G220200 Sobic002G362900--Sobic009G208800 Sobic002G362900--Sobic004G145200 Sobic005G231700 Sobic005G231700 Sobic002G362900--Sobic005G231700 Sobic002G362900--Sobic008G016900 Sobic002G362900--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic002G362900--Sobic001G409900 Sobic003G367300 Sobic003G367300 Sobic007G006600--Sobic003G367300 Sobic007G006600--Sobic002G118600 Sobic001G450700 Sobic001G450700 Sobic007G006600--Sobic001G450700 Sobic007G169200 Sobic007G169200 Sobic007G006600--Sobic007G169200 Sobic002G293300 Sobic002G293300 Sobic007G006600--Sobic002G293300 Sobic007G006600--Sobic002G330300 Sobic010G094600 Sobic010G094600 Sobic007G006600--Sobic010G094600 Sobic007G006600--Sobic007G188100 Sobic007G006600--Sobic001G147200
Octagon: transcription factors


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