Gene annotation
Transcriptome id Sobic.009G072200.1
Synonym Sb09g006060
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Myb transcription factor, putative, expressed
UniProt C5YUD6
Pfam PF00249
Panther DB PTHR12374 PTHR12374:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56840 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os05g10690.1 : Myb transcription factor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3B02G125500
Populus -


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cDNA sequences
Sobic.009G072200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G164960 - -
2 Sobic.010G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G127800 nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
4 Sobic.009G257700 N-rich protein, putative, expressed -
5 Sobic.006G000300 - -
6 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
7 Sobic.002G075800 Up-reguralion under drought(PubMedID : 24916767)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
8 Sobic.007G152800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutamate decarboxylase("PubMedID : 26759170,PubMedID : 24597475")@decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
9 Sobic.002G173800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
10 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
11 Sobic.002G167000 "C3 PTPC, housekeeping gene"(PubMedID : 2308851)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
12 Sobic.001G460300 expressed protein -
13 Sobic.005G133900 TPR repeat region family protein, expressed -
14 Sobic.010G035900 expressed protein -
15 Sobic.001G147300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
16 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
17 Sobic.003G203500 "cinnamoyl-CoA reductase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
18 Sobic.009G222000 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.003G272800 jacalin-like lectin domain containing protein, expressed -
20 Sobic.008G087500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -


Gene co-expression network
sample Sobic009G072200 Sobic009G072200 Sobic002G164960 Sobic002G164960 Sobic009G072200--Sobic002G164960 Sobic010G165200 Sobic010G165200 Sobic009G072200--Sobic010G165200 Sobic001G127800 Sobic001G127800 Sobic009G072200--Sobic001G127800 Sobic009G257700 Sobic009G257700 Sobic009G072200--Sobic009G257700 Sobic006G000300 Sobic006G000300 Sobic009G072200--Sobic006G000300 Sobic006G064800 Sobic006G064800 Sobic009G072200--Sobic006G064800 Sobic002G075800 Sobic002G075800 Sobic009G072200--Sobic002G075800 Sobic007G152800 Sobic007G152800 Sobic009G072200--Sobic007G152800 Sobic002G173800 Sobic002G173800 Sobic009G072200--Sobic002G173800 Sobic008G087500 Sobic008G087500 Sobic002G164960--Sobic008G087500 Sobic002G164960--Sobic009G072200 Sobic002G164960--Sobic002G075800 Sobic001G070401 Sobic001G070401 Sobic002G164960--Sobic001G070401 Sobic003G244100 Sobic003G244100 Sobic002G164960--Sobic003G244100 Sobic010G146500 Sobic010G146500 Sobic002G164960--Sobic010G146500 Sobic002G164960--Sobic002G173800 Sobic009G222000 Sobic009G222000 Sobic002G164960--Sobic009G222000 Sobic002G141800 Sobic002G141800 Sobic002G164960--Sobic002G141800 Sobic010G165200--Sobic001G127800 Sobic010G165200--Sobic007G152800 Sobic010G165200--Sobic009G072200 Sobic005G121200 Sobic005G121200 Sobic010G165200--Sobic005G121200 Sobic004G333100 Sobic004G333100 Sobic010G165200--Sobic004G333100 Sobic001G132800 Sobic001G132800 Sobic010G165200--Sobic001G132800 Sobic007G054500 Sobic007G054500 Sobic010G165200--Sobic007G054500 Sobic001G048900 Sobic001G048900 Sobic010G165200--Sobic001G048900 Sobic010G165200--Sobic006G064800 Sobic001G127800--Sobic005G121200 Sobic001G127800--Sobic010G165200 Sobic001G127800--Sobic007G152800 Sobic002G337800 Sobic002G337800 Sobic001G127800--Sobic002G337800 Sobic001G127800--Sobic009G072200 Sobic009G073000 Sobic009G073000 Sobic001G127800--Sobic009G073000 Sobic001G342600 Sobic001G342600 Sobic001G127800--Sobic001G342600 Sobic001G127800--Sobic006G064800 Sobic003G209600 Sobic003G209600 Sobic001G127800--Sobic003G209600 Sobic010G197500 Sobic010G197500 Sobic009G257700--Sobic010G197500 Sobic003G019700 Sobic003G019700 Sobic009G257700--Sobic003G019700 Sobic005G195600 Sobic005G195600 Sobic009G257700--Sobic005G195600 Sobic004G337900 Sobic004G337900 Sobic009G257700--Sobic004G337900 Sobic009G257700--Sobic009G072200 Sobic002G020900 Sobic002G020900 Sobic009G257700--Sobic002G020900 Sobic003G019800 Sobic003G019800 Sobic009G257700--Sobic003G019800 Sobic009G229300 Sobic009G229300 Sobic009G257700--Sobic009G229300 Sobic010G035900 Sobic010G035900 Sobic009G257700--Sobic010G035900 Sobic006G000100 Sobic006G000100 Sobic006G000300--Sobic006G000100 Sobic001G425100 Sobic001G425100 Sobic006G000300--Sobic001G425100 Sobic007G167200 Sobic007G167200 Sobic006G000300--Sobic007G167200 Sobic006G000300--Sobic009G072200 Sobic004G296400 Sobic004G296400 Sobic006G000300--Sobic004G296400 Sobic008G003700 Sobic008G003700 Sobic006G000300--Sobic008G003700 Sobic010G199200 Sobic010G199200 Sobic006G000300--Sobic010G199200 Sobic004G329300 Sobic004G329300 Sobic006G000300--Sobic004G329300 Sobic009G133600 Sobic009G133600 Sobic006G000300--Sobic009G133600 Sobic006G087900 Sobic006G087900 Sobic006G064800--Sobic006G087900 Sobic006G064800--Sobic005G195600 Sobic003G374700 Sobic003G374700 Sobic006G064800--Sobic003G374700 Sobic002G362900 Sobic002G362900 Sobic006G064800--Sobic002G362900 Sobic010G161450 Sobic010G161450 Sobic006G064800--Sobic010G161450 Sobic001G012800 Sobic001G012800 Sobic006G064800--Sobic001G012800 Sobic001G051800 Sobic001G051800 Sobic006G064800--Sobic001G051800 Sobic010G236500 Sobic010G236500 Sobic006G064800--Sobic010G236500 Sobic006G064800--Sobic009G073000 Sobic009G136700 Sobic009G136700 Sobic002G075800--Sobic009G136700 Sobic008G029300 Sobic008G029300 Sobic002G075800--Sobic008G029300 Sobic002G075800--Sobic002G173800 Sobic003G356000 Sobic003G356000 Sobic002G075800--Sobic003G356000 Sobic009G161800 Sobic009G161800 Sobic002G075800--Sobic009G161800 Sobic003G131800 Sobic003G131800 Sobic002G075800--Sobic003G131800 Sobic002G075800--Sobic002G164960 Sobic002G075800--Sobic008G087500 Sobic006G183200 Sobic006G183200 Sobic002G075800--Sobic006G183200 Sobic007G152800--Sobic010G165200 Sobic007G152800--Sobic005G121200 Sobic007G152800--Sobic001G127800 Sobic007G152800--Sobic001G048900 Sobic002G359000 Sobic002G359000 Sobic007G152800--Sobic002G359000 Sobic007G152800--Sobic008G087500 Sobic007G152800--Sobic003G244100 Sobic007G152800--Sobic009G072200 Sobic007G152800--Sobic002G173800 Sobic002G173800--Sobic002G075800 Sobic002G110100 Sobic002G110100 Sobic002G173800--Sobic002G110100 Sobic002G173800--Sobic008G029300 Sobic001G460300 Sobic001G460300 Sobic002G173800--Sobic001G460300 Sobic007G180900 Sobic007G180900 Sobic002G173800--Sobic007G180900 Sobic002G173800--Sobic005G121200 Sobic002G193600 Sobic002G193600 Sobic002G173800--Sobic002G193600 Sobic002G118700 Sobic002G118700 Sobic002G173800--Sobic002G118700 Sobic002G173800--Sobic009G072200
Octagon: transcription factors


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