Gene annotation
Transcriptome id Sobic.006G000300.1
Synonym
Functional annotation -
UniProt A0A1B6PJA5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G000100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
2 Sobic.001G425100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
3 Sobic.007G167200 OsSCP41 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
4 Sobic.009G072200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
5 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
6 Sobic.008G003700 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
7 Sobic.010G199200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
8 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
9 Sobic.009G133600 - -
10 Sobic.009G190600 oryzain alpha chain precursor, putative, expressed -
11 Sobic.003G244200 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
12 Sobic.001G048200 elongation factor P, putative, expressed -
13 Sobic.003G203500 "cinnamoyl-CoA reductase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
14 Sobic.004G080100 fumarylacetoacetase, putative, expressed K01555: FAH, fumarylacetoacetase
15 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
16 Sobic.001G292000 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
17 Sobic.009G073100 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
18 Sobic.010G220000 MYB family transcription factor, putative, expressed -
19 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
20 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4


Gene co-expression network
sample Sobic006G000300 Sobic006G000300 Sobic006G000100 Sobic006G000100 Sobic006G000300--Sobic006G000100 Sobic001G425100 Sobic001G425100 Sobic006G000300--Sobic001G425100 Sobic007G167200 Sobic007G167200 Sobic006G000300--Sobic007G167200 Sobic009G072200 Sobic009G072200 Sobic006G000300--Sobic009G072200 Sobic004G296400 Sobic004G296400 Sobic006G000300--Sobic004G296400 Sobic008G003700 Sobic008G003700 Sobic006G000300--Sobic008G003700 Sobic010G199200 Sobic010G199200 Sobic006G000300--Sobic010G199200 Sobic004G329300 Sobic004G329300 Sobic006G000300--Sobic004G329300 Sobic009G133600 Sobic009G133600 Sobic006G000300--Sobic009G133600 Sobic006G000100--Sobic006G000300 Sobic006G000100--Sobic008G003700 Sobic006G000100--Sobic004G329300 Sobic006G002000 Sobic006G002000 Sobic006G000100--Sobic006G002000 Sobic006G000100--Sobic004G296400 Sobic003G242000 Sobic003G242000 Sobic006G000100--Sobic003G242000 Sobic010G072400 Sobic010G072400 Sobic006G000100--Sobic010G072400 Sobic007G004500 Sobic007G004500 Sobic006G000100--Sobic007G004500 Sobic010G220000 Sobic010G220000 Sobic006G000100--Sobic010G220000 Sobic001G425100--Sobic006G000300 Sobic006G185500 Sobic006G185500 Sobic001G425100--Sobic006G185500 Sobic001G425100--Sobic010G199200 Sobic001G425100--Sobic006G000100 Sobic008G189100 Sobic008G189100 Sobic001G425100--Sobic008G189100 Sobic002G148700 Sobic002G148700 Sobic001G425100--Sobic002G148700 Sobic001G425100--Sobic007G167200 Sobic001G173500 Sobic001G173500 Sobic001G425100--Sobic001G173500 Sobic001G425100--Sobic004G329300 Sobic007G167200--Sobic004G296400 Sobic001G312900 Sobic001G312900 Sobic007G167200--Sobic001G312900 Sobic002G116900 Sobic002G116900 Sobic007G167200--Sobic002G116900 Sobic005G157000 Sobic005G157000 Sobic007G167200--Sobic005G157000 Sobic003G273600 Sobic003G273600 Sobic007G167200--Sobic003G273600 Sobic004G004300 Sobic004G004300 Sobic007G167200--Sobic004G004300 Sobic001G043100 Sobic001G043100 Sobic007G167200--Sobic001G043100 Sobic009G219000 Sobic009G219000 Sobic007G167200--Sobic009G219000 Sobic001G193300 Sobic001G193300 Sobic007G167200--Sobic001G193300 Sobic002G164960 Sobic002G164960 Sobic009G072200--Sobic002G164960 Sobic010G165200 Sobic010G165200 Sobic009G072200--Sobic010G165200 Sobic001G127800 Sobic001G127800 Sobic009G072200--Sobic001G127800 Sobic009G257700 Sobic009G257700 Sobic009G072200--Sobic009G257700 Sobic009G072200--Sobic006G000300 Sobic006G064800 Sobic006G064800 Sobic009G072200--Sobic006G064800 Sobic002G075800 Sobic002G075800 Sobic009G072200--Sobic002G075800 Sobic007G152800 Sobic007G152800 Sobic009G072200--Sobic007G152800 Sobic002G173800 Sobic002G173800 Sobic009G072200--Sobic002G173800 Sobic003G233600 Sobic003G233600 Sobic004G296400--Sobic003G233600 Sobic003G169600 Sobic003G169600 Sobic004G296400--Sobic003G169600 Sobic010G138000 Sobic010G138000 Sobic004G296400--Sobic010G138000 Sobic001G085300 Sobic001G085300 Sobic004G296400--Sobic001G085300 Sobic004G296400--Sobic002G116900 Sobic002G166300 Sobic002G166300 Sobic004G296400--Sobic002G166300 Sobic001G390800 Sobic001G390800 Sobic004G296400--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic004G296400--Sobic001G124200 Sobic004G040900 Sobic004G040900 Sobic004G296400--Sobic004G040900 Sobic005G003300 Sobic005G003300 Sobic008G003700--Sobic005G003300 Sobic004G344901 Sobic004G344901 Sobic008G003700--Sobic004G344901 Sobic007G075500 Sobic007G075500 Sobic008G003700--Sobic007G075500 Sobic001G404600 Sobic001G404600 Sobic008G003700--Sobic001G404600 Sobic008G124800 Sobic008G124800 Sobic008G003700--Sobic008G124800 Sobic003G029600 Sobic003G029600 Sobic008G003700--Sobic003G029600 Sobic003G337300 Sobic003G337300 Sobic008G003700--Sobic003G337300 Sobic004G261600 Sobic004G261600 Sobic008G003700--Sobic004G261600 Sobic007G054800 Sobic007G054800 Sobic008G003700--Sobic007G054800 Sobic010G199200--Sobic001G425100 Sobic004G341200 Sobic004G341200 Sobic010G199200--Sobic004G341200 Sobic010G199200--Sobic006G000300 Sobic002G375800 Sobic002G375800 Sobic010G199200--Sobic002G375800 Sobic010G161450 Sobic010G161450 Sobic010G199200--Sobic010G161450 Sobic003G047100 Sobic003G047100 Sobic010G199200--Sobic003G047100 Sobic006G247100 Sobic006G247100 Sobic010G199200--Sobic006G247100 Sobic010G199200--Sobic009G133600 Sobic009G139800 Sobic009G139800 Sobic010G199200--Sobic009G139800 Sobic001G282600 Sobic001G282600 Sobic004G329300--Sobic001G282600 Sobic010G169000 Sobic010G169000 Sobic004G329300--Sobic010G169000 Sobic002G266000 Sobic002G266000 Sobic004G329300--Sobic002G266000 Sobic006G104600 Sobic006G104600 Sobic004G329300--Sobic006G104600 Sobic004G225200 Sobic004G225200 Sobic004G329300--Sobic004G225200 Sobic009G193700 Sobic009G193700 Sobic004G329300--Sobic009G193700 Sobic003G257100 Sobic003G257100 Sobic004G329300--Sobic003G257100 Sobic003G322700 Sobic003G322700 Sobic004G329300--Sobic003G322700 Sobic004G329300--Sobic007G004500 Sobic009G133500 Sobic009G133500 Sobic009G133600--Sobic009G133500 Sobic005G203800 Sobic005G203800 Sobic009G133600--Sobic005G203800 Sobic008G032600 Sobic008G032600 Sobic009G133600--Sobic008G032600 Sobic004G136300 Sobic004G136300 Sobic009G133600--Sobic004G136300 Sobic009G139900 Sobic009G139900 Sobic009G133600--Sobic009G139900 Sobic009G133600--Sobic004G296400 Sobic010G130200 Sobic010G130200 Sobic009G133600--Sobic010G130200 Sobic009G133600--Sobic003G273600 Sobic004G127700 Sobic004G127700 Sobic009G133600--Sobic004G127700
Octagon: transcription factors


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