Gene annotation
Transcriptome id Sobic.010G220000.1
Synonym APL, WDY
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A194YKT0
Pfam PF00249 PF14379
Panther DB PTHR31499 PTHR31499:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79430 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os06g45410.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a051740 , Zm00025a019122 , Zm00025a006220
Brachypodium KQJ93578 , KQJ93576 , KQJ93577 , PNT65994 , KQK16997
Barley HORVU7Hr1G109130.9 , HORVU7Hr1G109130.8 , HORVU7Hr1G109130.5 , HORVU7Hr1G109130.4 , HORVU7Hr1G109130.7 , HORVU7Hr1G109130.6 , HORVU7Hr1G109130.1 , HORVU7Hr1G109130.3 , HORVU7Hr1G109130.2 , HORVU7Hr1G109130.11 , HORVU7Hr1G109130.10 , HORVU7Hr1G109130.13 , HORVU7Hr1G109130.12 , HORVU7Hr1G109130.15 , HORVU7Hr1G109130.14
Wheat TraesCS7B02G385700 , TraesCS6A02G155400 , TraesCS6A02G155400 , TraesCS6A02G155400 , TraesCS6B02G183500 , TraesCS6B02G183500 , TraesCS6B02G183500 , TraesCS6B02G183500 , TraesCS7D02G470000 , TraesCS7D02G470000 , TraesCS7A02G483100 , TraesCS6D02G145300 , TraesCS6D02G145300 , TraesCS6D02G145300 , TraesCS6D02G145300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
2 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
3 Sobic.002G187700 expressed protein -
4 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
5 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
6 Sobic.001G481900 SAC domain containing protein, putative, expressed -
7 Sobic.004G233200 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
8 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
9 Sobic.006G087700 T-complex protein 11, putative, expressed -
10 Sobic.006G000100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
11 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
12 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
13 Sobic.003G352600 ZOS1-16 - C2H2 zinc finger protein, expressed -
14 Sobic.006G082400 expressed protein -
15 Sobic.009G143700 no apical meristem protein, putative, expressed -
16 Sobic.006G247100 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
17 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
18 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
19 Sobic.006G002000 phosphoglycerate mutase, putative, expressed -
20 Sobic.004G125900 ethylene-responsive protein related, putative, expressed -


Gene co-expression network
sample Sobic010G220000 Sobic010G220000 Sobic008G059100 Sobic008G059100 Sobic010G220000--Sobic008G059100 Sobic001G462500 Sobic001G462500 Sobic010G220000--Sobic001G462500 Sobic002G187700 Sobic002G187700 Sobic010G220000--Sobic002G187700 Sobic003G126300 Sobic003G126300 Sobic010G220000--Sobic003G126300 Sobic002G266000 Sobic002G266000 Sobic010G220000--Sobic002G266000 Sobic001G481900 Sobic001G481900 Sobic010G220000--Sobic001G481900 Sobic004G233200 Sobic004G233200 Sobic010G220000--Sobic004G233200 Sobic001G409300 Sobic001G409300 Sobic010G220000--Sobic001G409300 Sobic006G087700 Sobic006G087700 Sobic010G220000--Sobic006G087700 Sobic001G488700 Sobic001G488700 Sobic008G059100--Sobic001G488700 Sobic008G059100--Sobic002G187700 Sobic008G059100--Sobic001G409300 Sobic008G059100--Sobic001G481900 Sobic008G059100--Sobic004G233200 Sobic003G302800 Sobic003G302800 Sobic008G059100--Sobic003G302800 Sobic009G190700 Sobic009G190700 Sobic008G059100--Sobic009G190700 Sobic007G164000 Sobic007G164000 Sobic008G059100--Sobic007G164000 Sobic010G262500 Sobic010G262500 Sobic008G059100--Sobic010G262500 Sobic001G462500--Sobic002G266000 Sobic006G204900 Sobic006G204900 Sobic001G462500--Sobic006G204900 Sobic003G322700 Sobic003G322700 Sobic001G462500--Sobic003G322700 Sobic004G265800 Sobic004G265800 Sobic001G462500--Sobic004G265800 Sobic001G016700 Sobic001G016700 Sobic001G462500--Sobic001G016700 Sobic007G004500 Sobic007G004500 Sobic001G462500--Sobic007G004500 Sobic004G266400 Sobic004G266400 Sobic001G462500--Sobic004G266400 Sobic001G462500--Sobic006G087700 Sobic001G207400 Sobic001G207400 Sobic001G462500--Sobic001G207400 Sobic002G187700--Sobic001G481900 Sobic004G306500 Sobic004G306500 Sobic002G187700--Sobic004G306500 Sobic002G187700--Sobic008G059100 Sobic003G198800 Sobic003G198800 Sobic002G187700--Sobic003G198800 Sobic002G187700--Sobic001G488700 Sobic003G115900 Sobic003G115900 Sobic002G187700--Sobic003G115900 Sobic006G002300 Sobic006G002300 Sobic002G187700--Sobic006G002300 Sobic003G190400 Sobic003G190400 Sobic002G187700--Sobic003G190400 Sobic004G169000 Sobic004G169000 Sobic002G187700--Sobic004G169000 Sobic004G228800 Sobic004G228800 Sobic003G126300--Sobic004G228800 Sobic009G079300 Sobic009G079300 Sobic003G126300--Sobic009G079300 Sobic004G004200 Sobic004G004200 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic006G034000 Sobic006G034000 Sobic003G126300--Sobic006G034000 Sobic003G272400 Sobic003G272400 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic002G266000--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200 Sobic001G481900--Sobic002G187700 Sobic001G481900--Sobic004G306500 Sobic001G481900--Sobic003G198800 Sobic003G372500 Sobic003G372500 Sobic001G481900--Sobic003G372500 Sobic010G147100 Sobic010G147100 Sobic001G481900--Sobic010G147100 Sobic001G481900--Sobic003G115900 Sobic001G481900--Sobic008G059100 Sobic001G128300 Sobic001G128300 Sobic001G481900--Sobic001G128300 Sobic001G481900--Sobic007G164000 Sobic004G233200--Sobic001G488700 Sobic004G233200--Sobic010G147100 Sobic002G130800 Sobic002G130800 Sobic004G233200--Sobic002G130800 Sobic004G233200--Sobic008G059100 Sobic001G390800 Sobic001G390800 Sobic004G233200--Sobic001G390800 Sobic004G233200--Sobic002G187700 Sobic002G305000 Sobic002G305000 Sobic004G233200--Sobic002G305000 Sobic001G268200 Sobic001G268200 Sobic004G233200--Sobic001G268200 Sobic004G233200--Sobic004G306500 Sobic001G409300--Sobic008G059100 Sobic004G211900 Sobic004G211900 Sobic001G409300--Sobic004G211900 Sobic003G242000 Sobic003G242000 Sobic001G409300--Sobic003G242000 Sobic001G217400 Sobic001G217400 Sobic001G409300--Sobic001G217400 Sobic010G272200 Sobic010G272200 Sobic001G409300--Sobic010G272200 Sobic003G051600 Sobic003G051600 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic003G397500 Sobic003G397500 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100 Sobic007G075400 Sobic007G075400 Sobic006G087700--Sobic007G075400 Sobic006G087700--Sobic003G322700 Sobic006G233500 Sobic006G233500 Sobic006G087700--Sobic006G233500 Sobic010G139600 Sobic010G139600 Sobic006G087700--Sobic010G139600 Sobic003G301900 Sobic003G301900 Sobic006G087700--Sobic003G301900 Sobic003G320700 Sobic003G320700 Sobic006G087700--Sobic003G320700 Sobic006G087700--Sobic006G204900 Sobic002G128200 Sobic002G128200 Sobic006G087700--Sobic002G128200 Sobic006G043600 Sobic006G043600 Sobic006G087700--Sobic006G043600
Octagon: transcription factors


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