Gene annotation
Transcriptome id Sobic.003G272800.1,Sobic.003G272800.2
Synonym Sb03g032480
Functional annotation jacalin-like lectin domain containing protein, expressed
UniProt A0A1B6Q5M3 , A0A1B6Q5M5
Pfam PF01419
Panther DB PTHR23244 PTHR23244:SF320
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73040 : Mannose-binding lectin superfamily protein
RAP-DB (Rice) LOC_Os01g51050.1 : jacalin-like lectin domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G012800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulatory protein, putative, expressed -
2 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
3 Sobic.010G069900 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
4 Sobic.001G113700 cytochrome b561, putative, expressed K08360: cytochrome b-561
5 Sobic.003G305601 - -
6 Sobic.002G292600 phytoene synthase(PubMedID : 22672222)@carotenoid biosynthesi(PubMedID : 18162592)@PSY3 expression influences root carotenogenesis and defines a potential bottleneck upstream of NCED(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
7 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
8 Sobic.001G482700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
10 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
11 Sobic.002G337800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G403600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
13 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
14 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
15 Sobic.003G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.009G220200 exostosin family domain containing protein, expressed -
17 Sobic.009G030600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@TKL_IRAK_DUF26-lf.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
19 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
20 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic003G272800 Sobic003G272800 Sobic001G012800 Sobic001G012800 Sobic003G272800--Sobic001G012800 Sobic005G195600 Sobic005G195600 Sobic003G272800--Sobic005G195600 Sobic010G069900 Sobic010G069900 Sobic003G272800--Sobic010G069900 Sobic001G113700 Sobic001G113700 Sobic003G272800--Sobic001G113700 Sobic003G305601 Sobic003G305601 Sobic003G272800--Sobic003G305601 Sobic002G292600 Sobic002G292600 Sobic003G272800--Sobic002G292600 Sobic006G064800 Sobic006G064800 Sobic003G272800--Sobic006G064800 Sobic001G482700 Sobic001G482700 Sobic003G272800--Sobic001G482700 Sobic004G145200 Sobic004G145200 Sobic003G272800--Sobic004G145200 Sobic002G118600 Sobic002G118600 Sobic001G012800--Sobic002G118600 Sobic001G012800--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic001G012800--Sobic009G241700 Sobic009G220200 Sobic009G220200 Sobic001G012800--Sobic009G220200 Sobic007G188100 Sobic007G188100 Sobic001G012800--Sobic007G188100 Sobic004G259500 Sobic004G259500 Sobic001G012800--Sobic004G259500 Sobic003G294400 Sobic003G294400 Sobic001G012800--Sobic003G294400 Sobic002G362900 Sobic002G362900 Sobic001G012800--Sobic002G362900 Sobic007G006600 Sobic007G006600 Sobic001G012800--Sobic007G006600 Sobic006G191100 Sobic006G191100 Sobic005G195600--Sobic006G191100 Sobic006G076201 Sobic006G076201 Sobic005G195600--Sobic006G076201 Sobic005G195600--Sobic006G064800 Sobic006G087900 Sobic006G087900 Sobic005G195600--Sobic006G087900 Sobic003G278700 Sobic003G278700 Sobic005G195600--Sobic003G278700 Sobic002G325900 Sobic002G325900 Sobic005G195600--Sobic002G325900 Sobic004G172100 Sobic004G172100 Sobic005G195600--Sobic004G172100 Sobic005G195600--Sobic004G145200 Sobic007G225300 Sobic007G225300 Sobic005G195600--Sobic007G225300 Sobic003G227700 Sobic003G227700 Sobic010G069900--Sobic003G227700 Sobic010G071400 Sobic010G071400 Sobic010G069900--Sobic010G071400 Sobic004G212300 Sobic004G212300 Sobic010G069900--Sobic004G212300 Sobic010G192432 Sobic010G192432 Sobic010G069900--Sobic010G192432 Sobic001G006201 Sobic001G006201 Sobic010G069900--Sobic001G006201 Sobic001G483600 Sobic001G483600 Sobic010G069900--Sobic001G483600 Sobic009G102600 Sobic009G102600 Sobic010G069900--Sobic009G102600 Sobic010G101900 Sobic010G101900 Sobic010G069900--Sobic010G101900 Sobic004G078800 Sobic004G078800 Sobic010G069900--Sobic004G078800 Sobic001G113700--Sobic009G220200 Sobic001G217000 Sobic001G217000 Sobic001G113700--Sobic001G217000 Sobic001G051800 Sobic001G051800 Sobic001G113700--Sobic001G051800 Sobic002G210300 Sobic002G210300 Sobic001G113700--Sobic002G210300 Sobic003G338900 Sobic003G338900 Sobic001G113700--Sobic003G338900 Sobic009G208800 Sobic009G208800 Sobic001G113700--Sobic009G208800 Sobic005G231700 Sobic005G231700 Sobic001G113700--Sobic005G231700 Sobic002G379400 Sobic002G379400 Sobic001G113700--Sobic002G379400 Sobic003G296700 Sobic003G296700 Sobic001G113700--Sobic003G296700 Sobic006G156000 Sobic006G156000 Sobic003G305601--Sobic006G156000 Sobic003G305601--Sobic004G212300 Sobic001G084100 Sobic001G084100 Sobic003G305601--Sobic001G084100 Sobic005G168100 Sobic005G168100 Sobic003G305601--Sobic005G168100 Sobic002G343500 Sobic002G343500 Sobic003G305601--Sobic002G343500 Sobic003G305601--Sobic002G210300 Sobic004G334800 Sobic004G334800 Sobic003G305601--Sobic004G334800 Sobic003G305601--Sobic001G113700 Sobic003G305601--Sobic009G220200 Sobic002G292600--Sobic004G145200 Sobic003G356700 Sobic003G356700 Sobic002G292600--Sobic003G356700 Sobic003G424500 Sobic003G424500 Sobic002G292600--Sobic003G424500 Sobic003G056500 Sobic003G056500 Sobic002G292600--Sobic003G056500 Sobic006G218700 Sobic006G218700 Sobic002G292600--Sobic006G218700 Sobic001G403600 Sobic001G403600 Sobic002G292600--Sobic001G403600 Sobic002G119800 Sobic002G119800 Sobic002G292600--Sobic002G119800 Sobic007G011000 Sobic007G011000 Sobic002G292600--Sobic007G011000 Sobic001G342600 Sobic001G342600 Sobic002G292600--Sobic001G342600 Sobic006G064800--Sobic006G087900 Sobic006G064800--Sobic005G195600 Sobic003G374700 Sobic003G374700 Sobic006G064800--Sobic003G374700 Sobic006G064800--Sobic002G362900 Sobic010G161450 Sobic010G161450 Sobic006G064800--Sobic010G161450 Sobic006G064800--Sobic001G012800 Sobic006G064800--Sobic001G051800 Sobic010G236500 Sobic010G236500 Sobic006G064800--Sobic010G236500 Sobic009G073000 Sobic009G073000 Sobic006G064800--Sobic009G073000 Sobic004G051166 Sobic004G051166 Sobic001G482700--Sobic004G051166 Sobic002G021300 Sobic002G021300 Sobic001G482700--Sobic002G021300 Sobic004G268700 Sobic004G268700 Sobic001G482700--Sobic004G268700 Sobic008G036000 Sobic008G036000 Sobic001G482700--Sobic008G036000 Sobic001G290400 Sobic001G290400 Sobic001G482700--Sobic001G290400 Sobic001G482700--Sobic001G403600 Sobic001G081600 Sobic001G081600 Sobic001G482700--Sobic001G081600 Sobic002G344700 Sobic002G344700 Sobic001G482700--Sobic002G344700 Sobic002G197600 Sobic002G197600 Sobic001G482700--Sobic002G197600 Sobic010G228000 Sobic010G228000 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic004G145200--Sobic007G188100 Sobic004G145200--Sobic006G076201 Sobic010G062800 Sobic010G062800 Sobic004G145200--Sobic010G062800 Sobic004G145200--Sobic002G362900 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic004G145200--Sobic002G118600
Octagon: transcription factors


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