Gene annotation
Transcriptome id Sobic.009G054600.1
Synonym GDCL, mtLPD1 , mtLPD1, Sb09g004610
Functional annotation - (PubMedID : 26976818)
dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed
UniProt C5Z0N4
Pfam PF12831 PF00070 PF02852
Panther DB PTHR22912 PTHR22912:SF148
NCBI CDD -
KEGG Orthology K00382; DLD, lpd, dihydrolipoamide dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G48030 : mitochondrial lipoamide dehydrogenase 1
RAP-DB (Rice) LOC_Os01g22520.1 : dihydrolipoyl dehydrogenase 1, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a024394 , Zm00025a036148
Brachypodium KQK04200 , KQK07356
Barley HORVU1Hr1G023630.3 , HORVU1Hr1G023630.2 , HORVU1Hr1G023630.1
Wheat TraesCS1B02G131300 , TraesCS1A02G066400 , TraesCS1D02G067500 , TraesCS1D02G109600 , TraesCS1A02G105600
Populus -


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cDNA sequences
Sobic.009G054600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
2 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
3 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
4 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
5 Sobic.001G501900 appr-1-p processing enzyme family protein, putative, expressed -
6 Sobic.003G049200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
7 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
8 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
9 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
10 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
11 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
12 Sobic.006G166400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ELMO/CED-12 family protein, putative, expressed -
13 Sobic.003G058500 expressed protein -
14 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
15 Sobic.004G350700 kelch repeat protein, putative, expressed -
16 Sobic.006G012700 expressed protein -
17 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
18 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
19 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
20 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -


Gene co-expression network
sample Sobic009G054600 Sobic009G054600 Sobic001G378800 Sobic001G378800 Sobic009G054600--Sobic001G378800 SobicK043400 SobicK043400 Sobic009G054600--SobicK043400 Sobic001G047600 Sobic001G047600 Sobic009G054600--Sobic001G047600 Sobic010G133400 Sobic010G133400 Sobic009G054600--Sobic010G133400 Sobic001G501900 Sobic001G501900 Sobic009G054600--Sobic001G501900 Sobic003G049200 Sobic003G049200 Sobic009G054600--Sobic003G049200 Sobic004G077300 Sobic004G077300 Sobic009G054600--Sobic004G077300 Sobic001G424800 Sobic001G424800 Sobic009G054600--Sobic001G424800 Sobic003G201500 Sobic003G201500 Sobic009G054600--Sobic003G201500 Sobic006G232800 Sobic006G232800 Sobic001G378800--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic001G378800--Sobic003G394500 Sobic001G378800--Sobic001G047600 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G378800--Sobic001G424800 Sobic003G260600 Sobic003G260600 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700 SobicK043400--Sobic001G378800 SobicK043400--Sobic001G047600 SobicK043400--Sobic009G054600 Sobic002G295700 Sobic002G295700 SobicK043400--Sobic002G295700 Sobic002G117600 Sobic002G117600 SobicK043400--Sobic002G117600 Sobic006G012700 Sobic006G012700 SobicK043400--Sobic006G012700 Sobic010G065200 Sobic010G065200 SobicK043400--Sobic010G065200 Sobic004G093600 Sobic004G093600 SobicK043400--Sobic004G093600 Sobic004G096700 Sobic004G096700 SobicK043400--Sobic004G096700 Sobic001G047600--Sobic004G093600 Sobic001G047600--Sobic001G378800 Sobic003G058500 Sobic003G058500 Sobic001G047600--Sobic003G058500 Sobic003G034900 Sobic003G034900 Sobic001G047600--Sobic003G034900 Sobic001G047600--Sobic006G012700 Sobic001G047600--SobicK043400 Sobic003G156400 Sobic003G156400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic010G133400--Sobic003G049200 Sobic010G133400--Sobic007G118500 Sobic010G133400--Sobic001G378800 Sobic008G072500 Sobic008G072500 Sobic010G133400--Sobic008G072500 Sobic004G263500 Sobic004G263500 Sobic010G133400--Sobic004G263500 Sobic001G356100 Sobic001G356100 Sobic010G133400--Sobic001G356100 Sobic010G133400--Sobic003G394500 Sobic008G171400 Sobic008G171400 Sobic010G133400--Sobic008G171400 Sobic002G193500 Sobic002G193500 Sobic010G133400--Sobic002G193500 Sobic001G501900--Sobic004G350700 Sobic003G385300 Sobic003G385300 Sobic001G501900--Sobic003G385300 Sobic008G055500 Sobic008G055500 Sobic001G501900--Sobic008G055500 Sobic002G304700 Sobic002G304700 Sobic001G501900--Sobic002G304700 Sobic010G160300 Sobic010G160300 Sobic001G501900--Sobic010G160300 Sobic001G501900--Sobic004G077300 Sobic001G501900--Sobic001G424800 Sobic008G152700 Sobic008G152700 Sobic001G501900--Sobic008G152700 Sobic003G117800 Sobic003G117800 Sobic001G501900--Sobic003G117800 Sobic003G049200--Sobic008G072500 Sobic003G049200--Sobic010G133400 Sobic003G049200--Sobic001G378800 Sobic003G049200--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic003G049200--Sobic002G255400 Sobic007G111300 Sobic007G111300 Sobic003G049200--Sobic007G111300 Sobic001G457000 Sobic001G457000 Sobic003G049200--Sobic001G457000 Sobic003G049200--Sobic006G232800 Sobic003G049200--Sobic007G118500 Sobic001G149000 Sobic001G149000 Sobic004G077300--Sobic001G149000 Sobic004G077300--Sobic003G385300 Sobic004G077300--Sobic008G152700 Sobic004G176200 Sobic004G176200 Sobic004G077300--Sobic004G176200 Sobic004G077300--Sobic001G378800 Sobic006G080700 Sobic006G080700 Sobic004G077300--Sobic006G080700 Sobic001G384200 Sobic001G384200 Sobic004G077300--Sobic001G384200 Sobic004G077300--Sobic004G350700 Sobic002G180800 Sobic002G180800 Sobic004G077300--Sobic002G180800 Sobic001G424800--Sobic003G117800 Sobic001G424800--Sobic003G058500 Sobic001G424800--Sobic004G350700 Sobic001G424800--Sobic001G356200 Sobic001G424800--Sobic001G149000 Sobic001G280500 Sobic001G280500 Sobic001G424800--Sobic001G280500 Sobic001G424800--Sobic003G394500 Sobic001G424800--Sobic003G385300 Sobic001G424800--Sobic001G378800 Sobic003G089100 Sobic003G089100 Sobic003G201500--Sobic003G089100 Sobic003G201500--Sobic003G260600 Sobic003G201500--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G201500--Sobic002G420600 Sobic003G201500--Sobic002G255400 Sobic003G201500--Sobic001G378800 Sobic006G120900 Sobic006G120900 Sobic003G201500--Sobic006G120900 Sobic001G400000 Sobic001G400000 Sobic003G201500--Sobic001G400000 Sobic004G038500 Sobic004G038500 Sobic003G201500--Sobic004G038500
Octagon: transcription factors


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