Gene annotation
Transcriptome id Sobic.002G283100.1
Synonym
Functional annotation josephin, putative, expressed
UniProt A0A1B6QDV3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54130 : Josephin family protein
RAP-DB (Rice) LOC_Os01g63250.1 : josephin, putative, expressed
MaizeGDB (Corn) Zm00025a039634
Brachypodium -
Barley -
Wheat TraesCS3A02G365900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G259401 - K06130: lysophospholipase II
2 Sobic.010G122100 AGC_PVPK_like_kin82y.13 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
4 Sobic.001G239900 amino acid permease, putative, expressed -
5 Sobic.002G201700 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.008G151500 EXS family protein, putative, expressed -
7 Sobic.009G083800 MYB family transcription factor, putative, expressed -
8 Sobic.001G000400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pleiotropic drug resistance protein, putative, expressed -
9 Sobic.004G107000 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
10 Sobic.007G179900 6-phosphogluconolactonase, putative, expressed K01057: PGLS, pgl, 6-phosphogluconolactonase
11 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
12 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
13 Sobic.002G070300 expressed protein -
14 Sobic.003G022000 phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed K01000: phospho-N-acetylmuramoyl-pentapeptide-transferase
15 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
16 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
17 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
18 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1
19 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
20 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -


Gene co-expression network
sample Sobic002G283100 Sobic002G283100 Sobic006G259401 Sobic006G259401 Sobic002G283100--Sobic006G259401 Sobic010G122100 Sobic010G122100 Sobic002G283100--Sobic010G122100 Sobic003G236800 Sobic003G236800 Sobic002G283100--Sobic003G236800 Sobic001G239900 Sobic001G239900 Sobic002G283100--Sobic001G239900 Sobic002G201700 Sobic002G201700 Sobic002G283100--Sobic002G201700 Sobic008G151500 Sobic008G151500 Sobic002G283100--Sobic008G151500 Sobic009G083800 Sobic009G083800 Sobic002G283100--Sobic009G083800 Sobic001G000400 Sobic001G000400 Sobic002G283100--Sobic001G000400 Sobic004G107000 Sobic004G107000 Sobic002G283100--Sobic004G107000 Sobic003G045600 Sobic003G045600 Sobic006G259401--Sobic003G045600 Sobic006G259401--Sobic008G151500 Sobic006G259401--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic006G259401--Sobic002G101300 Sobic007G120800 Sobic007G120800 Sobic006G259401--Sobic007G120800 Sobic001G140000 Sobic001G140000 Sobic006G259401--Sobic001G140000 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic007G179900 Sobic007G179900 Sobic006G259401--Sobic007G179900 Sobic003G372200 Sobic003G372200 Sobic010G122100--Sobic003G372200 Sobic001G378800 Sobic001G378800 Sobic010G122100--Sobic001G378800 Sobic004G077300 Sobic004G077300 Sobic010G122100--Sobic004G077300 Sobic001G486900 Sobic001G486900 Sobic010G122100--Sobic001G486900 Sobic010G122100--Sobic002G201700 Sobic004G284800 Sobic004G284800 Sobic010G122100--Sobic004G284800 Sobic002G167100 Sobic002G167100 Sobic010G122100--Sobic002G167100 Sobic001G400000 Sobic001G400000 Sobic010G122100--Sobic001G400000 Sobic002G070300 Sobic002G070300 Sobic010G122100--Sobic002G070300 Sobic003G236800--Sobic006G259401 Sobic003G236800--Sobic003G045600 Sobic002G117600 Sobic002G117600 Sobic003G236800--Sobic002G117600 Sobic002G408800 Sobic002G408800 Sobic003G236800--Sobic002G408800 Sobic003G236800--Sobic007G120800 Sobic007G119800 Sobic007G119800 Sobic003G236800--Sobic007G119800 Sobic003G236800--Sobic008G151500 Sobic003G236800--Sobic007G179900 Sobic001G380600 Sobic001G380600 Sobic003G236800--Sobic001G380600 Sobic007G192500 Sobic007G192500 Sobic001G239900--Sobic007G192500 Sobic009G081800 Sobic009G081800 Sobic001G239900--Sobic009G081800 Sobic006G126800 Sobic006G126800 Sobic001G239900--Sobic006G126800 Sobic003G022000 Sobic003G022000 Sobic001G239900--Sobic003G022000 Sobic009G103400 Sobic009G103400 Sobic001G239900--Sobic009G103400 Sobic001G239900--Sobic002G201700 Sobic009G244900 Sobic009G244900 Sobic001G239900--Sobic009G244900 Sobic002G310300 Sobic002G310300 Sobic001G239900--Sobic002G310300 Sobic001G239900--Sobic002G167100 Sobic002G201700--Sobic002G167100 Sobic009G025700 Sobic009G025700 Sobic002G201700--Sobic009G025700 Sobic002G201700--Sobic007G192500 Sobic003G013700 Sobic003G013700 Sobic002G201700--Sobic003G013700 Sobic004G261800 Sobic004G261800 Sobic002G201700--Sobic004G261800 Sobic009G042000 Sobic009G042000 Sobic002G201700--Sobic009G042000 Sobic002G201700--Sobic003G022000 Sobic010G253200 Sobic010G253200 Sobic002G201700--Sobic010G253200 Sobic002G201700--Sobic004G284800 Sobic001G443200 Sobic001G443200 Sobic008G151500--Sobic001G443200 Sobic001G220900 Sobic001G220900 Sobic008G151500--Sobic001G220900 SobicK043400 SobicK043400 Sobic008G151500--SobicK043400 Sobic008G151500--Sobic006G259401 Sobic004G000100 Sobic004G000100 Sobic008G151500--Sobic004G000100 Sobic001G458800 Sobic001G458800 Sobic008G151500--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic008G151500--Sobic003G034900 Sobic008G151500--Sobic002G070300 Sobic002G295700 Sobic002G295700 Sobic008G151500--Sobic002G295700 Sobic009G083800--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic009G083800--Sobic008G132200 Sobic007G048700 Sobic007G048700 Sobic009G083800--Sobic007G048700 Sobic003G169900 Sobic003G169900 Sobic009G083800--Sobic003G169900 Sobic009G083800--Sobic003G236800 Sobic009G083800--Sobic001G458800 Sobic009G083800--Sobic001G392200 Sobic002G055200 Sobic002G055200 Sobic009G083800--Sobic002G055200 Sobic003G196200 Sobic003G196200 Sobic009G083800--Sobic003G196200 Sobic001G000400--Sobic006G259401 Sobic001G000400--Sobic003G045600 Sobic001G000400--Sobic009G083800 Sobic001G000400--Sobic007G119800 Sobic006G220500 Sobic006G220500 Sobic001G000400--Sobic006G220500 Sobic007G065500 Sobic007G065500 Sobic001G000400--Sobic007G065500 Sobic001G000400--Sobic002G283100 Sobic001G000400--Sobic003G169900 Sobic001G000400--Sobic001G458800 Sobic004G107000--Sobic002G283100 Sobic004G186100 Sobic004G186100 Sobic004G107000--Sobic004G186100 Sobic010G013400 Sobic010G013400 Sobic004G107000--Sobic010G013400 Sobic004G226500 Sobic004G226500 Sobic004G107000--Sobic004G226500 Sobic010G040900 Sobic010G040900 Sobic004G107000--Sobic010G040900 Sobic002G222200 Sobic002G222200 Sobic004G107000--Sobic002G222200 Sobic001G347700 Sobic001G347700 Sobic004G107000--Sobic001G347700 Sobic006G271000 Sobic006G271000 Sobic004G107000--Sobic006G271000 Sobic001G073600 Sobic001G073600 Sobic004G107000--Sobic001G073600
Octagon: transcription factors


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