Gene annotation
Transcriptome id Sobic.004G130400.1
Synonym Sb04g011310
Functional annotation OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt A0A194YPE1
Pfam PF12695 PF00930
Panther DB PTHR11731 PTHR11731:SF110
NCBI CDD -
KEGG Orthology K01278; DPP4, dipeptidyl-peptidase 4
Gene Ontology GO:0006508; proteolysis


Orthologs (automatic annotation)
TAIR AT5G24260 : prolyl oligopeptidase family protein
RAP-DB (Rice) LOC_Os02g18850.1 : OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a019756
Brachypodium PNT66362 , KQJ94456
Barley HORVU5Hr1G026770.4 , HORVU5Hr1G026770.1 , HORVU5Hr1G026770.3 , HORVU5Hr1G026770.2
Wheat TraesCS5B02G104300 , TraesCS5A02G099100 , TraesCS5D02G111400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G130400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G205100 expressed protein -
2 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
3 Sobic.005G177700 transmembrane protein 49, putative, expressed -
4 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
5 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
6 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
7 Sobic.001G411900 TBC domain containing protein, expressed -
8 Sobic.008G097900 protein kinase domain containing protein, expressed -
9 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
10 Sobic.003G058500 expressed protein -
11 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
12 Sobic.008G143700 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
13 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
14 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
15 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
16 Sobic.007G172700 ECT5, putative, expressed -
17 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
18 Sobic.003G316200 transmembrane protein 49, putative, expressed -
19 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
20 Sobic.001G188900 expressed protein -


Gene co-expression network
sample Sobic004G130400 Sobic004G130400 Sobic001G205100 Sobic001G205100 Sobic004G130400--Sobic001G205100 Sobic009G162100 Sobic009G162100 Sobic004G130400--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic004G130400--Sobic005G177700 Sobic009G224000 Sobic009G224000 Sobic004G130400--Sobic009G224000 Sobic001G047600 Sobic001G047600 Sobic004G130400--Sobic001G047600 Sobic003G394200 Sobic003G394200 Sobic004G130400--Sobic003G394200 Sobic001G411900 Sobic001G411900 Sobic004G130400--Sobic001G411900 Sobic008G097900 Sobic008G097900 Sobic004G130400--Sobic008G097900 Sobic004G078700 Sobic004G078700 Sobic004G130400--Sobic004G078700 Sobic008G168200 Sobic008G168200 Sobic001G205100--Sobic008G168200 Sobic001G205100--Sobic008G097900 Sobic001G389200 Sobic001G389200 Sobic001G205100--Sobic001G389200 Sobic003G156400 Sobic003G156400 Sobic001G205100--Sobic003G156400 Sobic003G021600 Sobic003G021600 Sobic001G205100--Sobic003G021600 Sobic008G171400 Sobic008G171400 Sobic001G205100--Sobic008G171400 Sobic006G060000 Sobic006G060000 Sobic001G205100--Sobic006G060000 Sobic001G205100--Sobic004G130400 Sobic003G397900 Sobic003G397900 Sobic001G205100--Sobic003G397900 Sobic007G172700 Sobic007G172700 Sobic009G162100--Sobic007G172700 Sobic009G162100--Sobic006G060000 Sobic002G355800 Sobic002G355800 Sobic009G162100--Sobic002G355800 Sobic003G058500 Sobic003G058500 Sobic009G162100--Sobic003G058500 Sobic009G162100--Sobic001G047600 Sobic001G253300 Sobic001G253300 Sobic009G162100--Sobic001G253300 Sobic001G475300 Sobic001G475300 Sobic009G162100--Sobic001G475300 Sobic003G181700 Sobic003G181700 Sobic009G162100--Sobic003G181700 Sobic002G200000 Sobic002G200000 Sobic009G162100--Sobic002G200000 Sobic003G316200 Sobic003G316200 Sobic005G177700--Sobic003G316200 Sobic007G056100 Sobic007G056100 Sobic005G177700--Sobic007G056100 Sobic005G177700--Sobic002G355800 Sobic006G077300 Sobic006G077300 Sobic005G177700--Sobic006G077300 Sobic009G041700 Sobic009G041700 Sobic005G177700--Sobic009G041700 Sobic005G177700--Sobic001G253300 Sobic004G228800 Sobic004G228800 Sobic005G177700--Sobic004G228800 Sobic003G365100 Sobic003G365100 Sobic005G177700--Sobic003G365100 Sobic002G268800 Sobic002G268800 Sobic005G177700--Sobic002G268800 Sobic003G338500 Sobic003G338500 Sobic009G224000--Sobic003G338500 Sobic010G243400 Sobic010G243400 Sobic009G224000--Sobic010G243400 Sobic009G224000--Sobic007G056100 Sobic002G361300 Sobic002G361300 Sobic009G224000--Sobic002G361300 Sobic009G224000--Sobic004G130400 Sobic010G261600 Sobic010G261600 Sobic009G224000--Sobic010G261600 Sobic009G224000--Sobic003G394200 Sobic003G270600 Sobic003G270600 Sobic009G224000--Sobic003G270600 Sobic008G173400 Sobic008G173400 Sobic009G224000--Sobic008G173400 Sobic004G093600 Sobic004G093600 Sobic001G047600--Sobic004G093600 Sobic001G378800 Sobic001G378800 Sobic001G047600--Sobic001G378800 Sobic001G047600--Sobic003G058500 Sobic003G034900 Sobic003G034900 Sobic001G047600--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic004G084500 Sobic004G084500 Sobic003G394200--Sobic004G084500 Sobic006G203300 Sobic006G203300 Sobic003G394200--Sobic006G203300 Sobic006G128100 Sobic006G128100 Sobic003G394200--Sobic006G128100 Sobic010G223400 Sobic010G223400 Sobic003G394200--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic003G394200--Sobic001G308400 Sobic009G049400 Sobic009G049400 Sobic003G394200--Sobic009G049400 Sobic003G394200--Sobic003G270600 Sobic003G189600 Sobic003G189600 Sobic003G394200--Sobic003G189600 Sobic001G369000 Sobic001G369000 Sobic003G394200--Sobic001G369000 Sobic001G411900--Sobic008G097900 Sobic003G190200 Sobic003G190200 Sobic001G411900--Sobic003G190200 Sobic001G411900--Sobic007G172700 Sobic009G122500 Sobic009G122500 Sobic001G411900--Sobic009G122500 Sobic001G411900--Sobic003G021600 Sobic002G117600 Sobic002G117600 Sobic001G411900--Sobic002G117600 Sobic009G194000 Sobic009G194000 Sobic001G411900--Sobic009G194000 Sobic004G122900 Sobic004G122900 Sobic001G411900--Sobic004G122900 Sobic003G394500 Sobic003G394500 Sobic001G411900--Sobic003G394500 Sobic008G097900--Sobic007G172700 Sobic008G152700 Sobic008G152700 Sobic008G097900--Sobic008G152700 Sobic004G350700 Sobic004G350700 Sobic008G097900--Sobic004G350700 Sobic008G097900--Sobic001G411900 Sobic008G097900--Sobic001G205100 Sobic004G077300 Sobic004G077300 Sobic008G097900--Sobic004G077300 Sobic001G501900 Sobic001G501900 Sobic008G097900--Sobic001G501900 Sobic008G097900--Sobic001G253300 Sobic008G097900--Sobic002G117600 Sobic004G078700--Sobic001G389200 Sobic004G078700--Sobic001G465400 Sobic004G100200 Sobic004G100200 Sobic004G078700--Sobic004G100200 Sobic004G078700--Sobic010G223400 Sobic004G078700--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic004G078700--Sobic004G254800 Sobic004G078700--Sobic007G118500 Sobic001G378200 Sobic001G378200 Sobic004G078700--Sobic001G378200 Sobic004G078700--Sobic003G316200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.