Gene annotation
Transcriptome id Sobic.008G143700.1
Synonym ATNRAMP2, Sb08g019400, NRAMP2
Functional annotation natural resistance-associated macrophage protein, putative, expressed
UniProt C5YQG7
Pfam PF01566
Panther DB PTHR11706 PTHR11706:SF46
NCBI CDD -
KEGG Orthology K12347; SLC11A1, natural resistance-associated macrophage protein 1
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G47240 : NRAMP metal ion transporter 2
RAP-DB (Rice) LOC_Os12g39180.1 : natural resistance-associated macrophage protein, putative, expressed
MaizeGDB (Corn) Zm00025a053124 , Zm00025a004385
Brachypodium KQJ86130 , KQK14229
Barley HORVU5Hr1G018850.3 , HORVU5Hr1G018850.2 , HORVU5Hr1G018850.5 , HORVU5Hr1G018850.4 , HORVU5Hr1G018850.7 , HORVU5Hr1G018850.6 , HORVU5Hr1G018850.9 , HORVU5Hr1G018850.8 , HORVU5Hr1G018850.11 , HORVU5Hr1G018850.10 , HORVU7Hr1G087000.21 , HORVU7Hr1G087000.20 , HORVU4Hr1G013220.2 , HORVU4Hr1G013220.3 , HORVU4Hr1G013220.1 , HORVU4Hr1G013220.4 , HORVU4Hr1G013220.5 , HORVU7Hr1G087000.18 , HORVU7Hr1G087000.19 , HORVU7Hr1G087000.16 , HORVU7Hr1G087000.17
Wheat TraesCS5A02G072200 , TraesCS4D02G076500 , TraesCS4A02G237200 , TraesCS5B02G078700 , TraesCS4B02G078000 , TraesCS5D02G084900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G130400 OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed K01278: DPP4, dipeptidyl-peptidase 4
2 Sobic.009G224000 OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed K10758: thiol oxidase
3 Sobic.001G411900 TBC domain containing protein, expressed -
4 Sobic.003G058500 expressed protein -
5 Sobic.001G335000 erlin-2 precursor, putative, expressed -
6 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
7 Sobic.009G199500 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
8 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
9 Sobic.001G205100 expressed protein -
10 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
11 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
12 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
13 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
14 Sobic.008G097900 protein kinase domain containing protein, expressed -
15 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
16 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2
17 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
18 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
19 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
20 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic008G143700 Sobic008G143700 Sobic004G130400 Sobic004G130400 Sobic008G143700--Sobic004G130400 Sobic009G224000 Sobic009G224000 Sobic008G143700--Sobic009G224000 Sobic001G411900 Sobic001G411900 Sobic008G143700--Sobic001G411900 Sobic003G058500 Sobic003G058500 Sobic008G143700--Sobic003G058500 Sobic001G335000 Sobic001G335000 Sobic008G143700--Sobic001G335000 Sobic009G162100 Sobic009G162100 Sobic008G143700--Sobic009G162100 Sobic009G199500 Sobic009G199500 Sobic008G143700--Sobic009G199500 Sobic004G254800 Sobic004G254800 Sobic008G143700--Sobic004G254800 Sobic001G205100 Sobic001G205100 Sobic008G143700--Sobic001G205100 Sobic004G130400--Sobic001G205100 Sobic004G130400--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic004G130400--Sobic005G177700 Sobic004G130400--Sobic009G224000 Sobic001G047600 Sobic001G047600 Sobic004G130400--Sobic001G047600 Sobic003G394200 Sobic003G394200 Sobic004G130400--Sobic003G394200 Sobic004G130400--Sobic001G411900 Sobic008G097900 Sobic008G097900 Sobic004G130400--Sobic008G097900 Sobic004G078700 Sobic004G078700 Sobic004G130400--Sobic004G078700 Sobic003G338500 Sobic003G338500 Sobic009G224000--Sobic003G338500 Sobic010G243400 Sobic010G243400 Sobic009G224000--Sobic010G243400 Sobic007G056100 Sobic007G056100 Sobic009G224000--Sobic007G056100 Sobic002G361300 Sobic002G361300 Sobic009G224000--Sobic002G361300 Sobic009G224000--Sobic004G130400 Sobic010G261600 Sobic010G261600 Sobic009G224000--Sobic010G261600 Sobic009G224000--Sobic003G394200 Sobic003G270600 Sobic003G270600 Sobic009G224000--Sobic003G270600 Sobic008G173400 Sobic008G173400 Sobic009G224000--Sobic008G173400 Sobic001G411900--Sobic008G097900 Sobic003G190200 Sobic003G190200 Sobic001G411900--Sobic003G190200 Sobic007G172700 Sobic007G172700 Sobic001G411900--Sobic007G172700 Sobic009G122500 Sobic009G122500 Sobic001G411900--Sobic009G122500 Sobic003G021600 Sobic003G021600 Sobic001G411900--Sobic003G021600 Sobic002G117600 Sobic002G117600 Sobic001G411900--Sobic002G117600 Sobic009G194000 Sobic009G194000 Sobic001G411900--Sobic009G194000 Sobic004G122900 Sobic004G122900 Sobic001G411900--Sobic004G122900 Sobic003G394500 Sobic003G394500 Sobic001G411900--Sobic003G394500 Sobic001G424800 Sobic001G424800 Sobic003G058500--Sobic001G424800 Sobic010G181600 Sobic010G181600 Sobic003G058500--Sobic010G181600 Sobic003G058500--Sobic007G172700 Sobic003G058500--Sobic001G047600 Sobic004G350700 Sobic004G350700 Sobic003G058500--Sobic004G350700 Sobic002G355800 Sobic002G355800 Sobic003G058500--Sobic002G355800 Sobic001G378800 Sobic001G378800 Sobic003G058500--Sobic001G378800 Sobic008G152700 Sobic008G152700 Sobic003G058500--Sobic008G152700 Sobic003G117800 Sobic003G117800 Sobic003G058500--Sobic003G117800 Sobic001G335000--Sobic009G122500 Sobic004G060300 Sobic004G060300 Sobic001G335000--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic001G335000--Sobic001G156900 Sobic001G335000--Sobic004G122900 Sobic001G012900 Sobic001G012900 Sobic001G335000--Sobic001G012900 Sobic001G043200 Sobic001G043200 Sobic001G335000--Sobic001G043200 Sobic001G193100 Sobic001G193100 Sobic001G335000--Sobic001G193100 Sobic003G181700 Sobic003G181700 Sobic001G335000--Sobic003G181700 Sobic007G118500 Sobic007G118500 Sobic001G335000--Sobic007G118500 Sobic009G162100--Sobic007G172700 Sobic006G060000 Sobic006G060000 Sobic009G162100--Sobic006G060000 Sobic009G162100--Sobic002G355800 Sobic009G162100--Sobic003G058500 Sobic009G162100--Sobic001G047600 Sobic001G253300 Sobic001G253300 Sobic009G162100--Sobic001G253300 Sobic001G475300 Sobic001G475300 Sobic009G162100--Sobic001G475300 Sobic009G162100--Sobic003G181700 Sobic002G200000 Sobic002G200000 Sobic009G162100--Sobic002G200000 Sobic007G158900 Sobic007G158900 Sobic009G199500--Sobic007G158900 Sobic009G227100 Sobic009G227100 Sobic009G199500--Sobic009G227100 Sobic003G445200 Sobic003G445200 Sobic009G199500--Sobic003G445200 Sobic002G299100 Sobic002G299100 Sobic009G199500--Sobic002G299100 Sobic002G131400 Sobic002G131400 Sobic009G199500--Sobic002G131400 Sobic009G199500--Sobic004G122900 Sobic004G084400 Sobic004G084400 Sobic009G199500--Sobic004G084400 Sobic009G199500--Sobic001G043200 Sobic002G398500 Sobic002G398500 Sobic009G199500--Sobic002G398500 Sobic003G346400 Sobic003G346400 Sobic004G254800--Sobic003G346400 Sobic001G389200 Sobic001G389200 Sobic004G254800--Sobic001G389200 Sobic004G254800--Sobic004G078700 Sobic004G254800--Sobic003G394200 Sobic001G161700 Sobic001G161700 Sobic004G254800--Sobic001G161700 Sobic004G254800--Sobic009G122500 Sobic004G254800--Sobic004G060300 Sobic002G395500 Sobic002G395500 Sobic004G254800--Sobic002G395500 Sobic004G254800--Sobic003G394500 Sobic008G168200 Sobic008G168200 Sobic001G205100--Sobic008G168200 Sobic001G205100--Sobic008G097900 Sobic001G205100--Sobic001G389200 Sobic003G156400 Sobic003G156400 Sobic001G205100--Sobic003G156400 Sobic001G205100--Sobic003G021600 Sobic008G171400 Sobic008G171400 Sobic001G205100--Sobic008G171400 Sobic001G205100--Sobic006G060000 Sobic001G205100--Sobic004G130400 Sobic003G397900 Sobic003G397900 Sobic001G205100--Sobic003G397900
Octagon: transcription factors


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