Gene annotation
Transcriptome id Sobic.009G162100.1,Sobic.009G162100.2
Synonym Sb09g022440
Functional annotation DHHC zinc finger domain containing protein, expressed
UniProt A0A1B6P8U5 , A0A1B6P907
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF92
NCBI CDD KOG1315; Predicted DHHC-type Zn-finger protein
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G09320 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os01g62620.1 : DHHC zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043894
Brachypodium KQK05925 , KQK05927 , PNT73175 , PNT73176
Barley HORVU1Hr1G072560.11 , HORVU1Hr1G072560.10 , HORVU1Hr1G072560.5 , HORVU1Hr1G072560.4 , HORVU1Hr1G072560.7 , HORVU1Hr1G072560.6 , HORVU1Hr1G072560.1 , HORVU1Hr1G072560.3 , HORVU1Hr1G072560.2 , HORVU1Hr1G072560.9 , HORVU1Hr1G072560.8
Wheat TraesCS1D02G282400 , TraesCS3D02G355100 , TraesCS1B02G292300 , TraesCS1A02G283200 , TraesCS1A02G283200
Populus -


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cDNA sequences
Sobic.009G162100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G172700 ECT5, putative, expressed -
2 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
3 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
4 Sobic.003G058500 expressed protein -
5 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
6 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
7 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
8 Sobic.003G181700 GPI mannosyltransferase 2, putative, expressed K07542: GPI mannosyltransferase 2
9 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
10 Sobic.004G130400 OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed K01278: DPP4, dipeptidyl-peptidase 4
11 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
12 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
13 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
14 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
15 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
16 Sobic.007G156200 glycoprotein 3-alpha-L-fucosyltransferase A, putative, expressed K00753: glycoprotein 3-alpha-L-fucosyltransferase
17 Sobic.004G004100 nucleic acid binding protein, putative, expressed -
18 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
19 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
20 Sobic.001G014200 protein kinase domain containing protein, expressed K08829: male germ cell-associated kinase


Gene co-expression network
sample Sobic009G162100 Sobic009G162100 Sobic007G172700 Sobic007G172700 Sobic009G162100--Sobic007G172700 Sobic006G060000 Sobic006G060000 Sobic009G162100--Sobic006G060000 Sobic002G355800 Sobic002G355800 Sobic009G162100--Sobic002G355800 Sobic003G058500 Sobic003G058500 Sobic009G162100--Sobic003G058500 Sobic001G047600 Sobic001G047600 Sobic009G162100--Sobic001G047600 Sobic001G253300 Sobic001G253300 Sobic009G162100--Sobic001G253300 Sobic001G475300 Sobic001G475300 Sobic009G162100--Sobic001G475300 Sobic003G181700 Sobic003G181700 Sobic009G162100--Sobic003G181700 Sobic002G200000 Sobic002G200000 Sobic009G162100--Sobic002G200000 Sobic007G172700--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic007G172700--Sobic004G350700 Sobic008G152700 Sobic008G152700 Sobic007G172700--Sobic008G152700 Sobic003G190200 Sobic003G190200 Sobic007G172700--Sobic003G190200 Sobic003G394500 Sobic003G394500 Sobic007G172700--Sobic003G394500 Sobic007G172700--Sobic003G058500 Sobic007G172700--Sobic002G355800 Sobic001G424800 Sobic001G424800 Sobic007G172700--Sobic001G424800 Sobic007G030100 Sobic007G030100 Sobic007G172700--Sobic007G030100 Sobic008G055500 Sobic008G055500 Sobic006G060000--Sobic008G055500 Sobic006G060000--Sobic004G350700 Sobic006G060000--Sobic007G172700 Sobic001G114200 Sobic001G114200 Sobic006G060000--Sobic001G114200 Sobic006G060000--Sobic003G394500 Sobic001G389200 Sobic001G389200 Sobic006G060000--Sobic001G389200 Sobic004G263500 Sobic004G263500 Sobic006G060000--Sobic004G263500 Sobic003G117800 Sobic003G117800 Sobic006G060000--Sobic003G117800 Sobic001G490900 Sobic001G490900 Sobic006G060000--Sobic001G490900 Sobic010G169900 Sobic010G169900 Sobic002G355800--Sobic010G169900 Sobic002G355800--Sobic007G172700 Sobic006G128100 Sobic006G128100 Sobic002G355800--Sobic006G128100 Sobic010G213500 Sobic010G213500 Sobic002G355800--Sobic010G213500 Sobic002G355800--Sobic001G389200 Sobic002G355800--Sobic001G475300 Sobic002G355800--Sobic003G058500 Sobic002G355800--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic002G355800--Sobic005G177700 Sobic003G058500--Sobic001G424800 Sobic010G181600 Sobic010G181600 Sobic003G058500--Sobic010G181600 Sobic003G058500--Sobic007G172700 Sobic003G058500--Sobic001G047600 Sobic003G058500--Sobic004G350700 Sobic003G058500--Sobic002G355800 Sobic001G378800 Sobic001G378800 Sobic003G058500--Sobic001G378800 Sobic003G058500--Sobic008G152700 Sobic003G058500--Sobic003G117800 Sobic004G093600 Sobic004G093600 Sobic001G047600--Sobic004G093600 Sobic001G047600--Sobic001G378800 Sobic001G047600--Sobic003G058500 Sobic003G034900 Sobic003G034900 Sobic001G047600--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G047600--Sobic006G012700 SobicK043400 SobicK043400 Sobic001G047600--SobicK043400 Sobic003G156400 Sobic003G156400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic003G316200 Sobic003G316200 Sobic001G253300--Sobic003G316200 Sobic001G188400 Sobic001G188400 Sobic001G253300--Sobic001G188400 Sobic001G253300--Sobic007G172700 Sobic008G097900 Sobic008G097900 Sobic001G253300--Sobic008G097900 Sobic003G365100 Sobic003G365100 Sobic001G253300--Sobic003G365100 Sobic001G253300--Sobic005G177700 Sobic001G253300--Sobic002G355800 Sobic006G250800 Sobic006G250800 Sobic001G253300--Sobic006G250800 Sobic001G253300--Sobic009G162100 Sobic003G250400 Sobic003G250400 Sobic001G475300--Sobic003G250400 Sobic001G475300--Sobic010G181600 Sobic001G141400 Sobic001G141400 Sobic001G475300--Sobic001G141400 Sobic001G475300--Sobic003G117800 Sobic001G475300--Sobic007G172700 Sobic001G475300--Sobic002G355800 Sobic001G475300--Sobic003G058500 Sobic001G475300--Sobic008G152700 Sobic004G302800 Sobic004G302800 Sobic001G475300--Sobic004G302800 Sobic009G194000 Sobic009G194000 Sobic003G181700--Sobic009G194000 Sobic003G021600 Sobic003G021600 Sobic003G181700--Sobic003G021600 Sobic004G122900 Sobic004G122900 Sobic003G181700--Sobic004G122900 Sobic003G181700--Sobic001G490900 Sobic003G181700--Sobic010G169900 Sobic002G227500 Sobic002G227500 Sobic003G181700--Sobic002G227500 Sobic003G181700--Sobic006G060000 Sobic009G122500 Sobic009G122500 Sobic003G181700--Sobic009G122500 Sobic003G181700--Sobic007G172700 Sobic002G200000--Sobic006G060000 Sobic007G076400 Sobic007G076400 Sobic002G200000--Sobic007G076400 Sobic008G116700 Sobic008G116700 Sobic002G200000--Sobic008G116700 Sobic002G200000--Sobic001G141400 Sobic006G115100 Sobic006G115100 Sobic002G200000--Sobic006G115100 Sobic002G200000--Sobic008G055500 Sobic002G200000--Sobic007G172700 Sobic007G087000 Sobic007G087000 Sobic002G200000--Sobic007G087000 Sobic002G200000--Sobic002G355800
Octagon: transcription factors


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