Gene annotation
Transcriptome id Sobic.001G411900.1
Synonym Sb01g038840
Functional annotation TBC domain containing protein, expressed
UniProt A0A1Z5SAK2
Pfam PF00566
Panther DB PTHR22957 PTHR22957:SF318
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55020 : Ypt/Rab-GAP domain of gyp1p superfamily protein
RAP-DB (Rice) LOC_Os03g17540.1 : TBC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001925 , Zm00025a052711 , Zm00025a053640
Brachypodium KQK22222 , KQK22223 , KQK22225 , KQK22224
Barley HORVU4Hr1G057510.1 , HORVU4Hr1G057510.2 , HORVU4Hr1G057510.3 , HORVU4Hr1G057510.4 , HORVU4Hr1G057510.5 , HORVU4Hr1G057510.6
Wheat TraesCS4B02G199000 , TraesCS4B02G199000 , TraesCS4B02G199000 , TraesCS4B02G199000 , TraesCS4B02G199000 , TraesCS4B02G199000 , TraesCS4B02G199000 , TraesCS4D02G199900 , TraesCS4D02G199900 , TraesCS4D02G199900 , TraesCS4D02G199900 , TraesCS4D02G199900 , TraesCS4D02G199900 , TraesCS4A02G105000 , TraesCS4A02G105000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G097900 protein kinase domain containing protein, expressed -
2 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
3 Sobic.007G172700 ECT5, putative, expressed -
4 Sobic.009G122500 expressed protein -
5 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
6 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
7 Sobic.009G194000 Alg9-like mannosyltransferase protein, putative, expressed K05286: GPI mannosyltransferase 3
8 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
9 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
10 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
11 Sobic.004G130400 OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed K01278: DPP4, dipeptidyl-peptidase 4
12 Sobic.001G205100 expressed protein -
13 Sobic.004G337800 UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed K11718: UDP-glucose:glycoprotein glucosyltransferase
14 Sobic.002G164300 ZOS9-03 - C2H2 zinc finger protein, expressed -
15 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
16 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
17 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.001G308400 expressed protein -
19 Sobic.004G060300 DNA binding protein, putative, expressed -
20 Sobic.001G335000 erlin-2 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G411900 Sobic001G411900 Sobic008G097900 Sobic008G097900 Sobic001G411900--Sobic008G097900 Sobic003G190200 Sobic003G190200 Sobic001G411900--Sobic003G190200 Sobic007G172700 Sobic007G172700 Sobic001G411900--Sobic007G172700 Sobic009G122500 Sobic009G122500 Sobic001G411900--Sobic009G122500 Sobic003G021600 Sobic003G021600 Sobic001G411900--Sobic003G021600 Sobic002G117600 Sobic002G117600 Sobic001G411900--Sobic002G117600 Sobic009G194000 Sobic009G194000 Sobic001G411900--Sobic009G194000 Sobic004G122900 Sobic004G122900 Sobic001G411900--Sobic004G122900 Sobic003G394500 Sobic003G394500 Sobic001G411900--Sobic003G394500 Sobic008G097900--Sobic007G172700 Sobic008G152700 Sobic008G152700 Sobic008G097900--Sobic008G152700 Sobic004G350700 Sobic004G350700 Sobic008G097900--Sobic004G350700 Sobic008G097900--Sobic001G411900 Sobic001G205100 Sobic001G205100 Sobic008G097900--Sobic001G205100 Sobic004G077300 Sobic004G077300 Sobic008G097900--Sobic004G077300 Sobic001G501900 Sobic001G501900 Sobic008G097900--Sobic001G501900 Sobic001G253300 Sobic001G253300 Sobic008G097900--Sobic001G253300 Sobic008G097900--Sobic002G117600 Sobic007G030100 Sobic007G030100 Sobic003G190200--Sobic007G030100 Sobic003G190200--Sobic003G394500 Sobic003G190200--Sobic007G172700 Sobic003G190200--Sobic003G021600 Sobic009G252300 Sobic009G252300 Sobic003G190200--Sobic009G252300 Sobic001G424800 Sobic001G424800 Sobic003G190200--Sobic001G424800 Sobic003G393200 Sobic003G393200 Sobic003G190200--Sobic003G393200 Sobic003G428000 Sobic003G428000 Sobic003G190200--Sobic003G428000 Sobic001G385000 Sobic001G385000 Sobic003G190200--Sobic001G385000 Sobic006G060000 Sobic006G060000 Sobic007G172700--Sobic006G060000 Sobic007G172700--Sobic004G350700 Sobic007G172700--Sobic008G152700 Sobic007G172700--Sobic003G190200 Sobic007G172700--Sobic003G394500 Sobic003G058500 Sobic003G058500 Sobic007G172700--Sobic003G058500 Sobic002G355800 Sobic002G355800 Sobic007G172700--Sobic002G355800 Sobic007G172700--Sobic001G424800 Sobic007G172700--Sobic007G030100 Sobic001G335000 Sobic001G335000 Sobic009G122500--Sobic001G335000 Sobic004G060300 Sobic004G060300 Sobic009G122500--Sobic004G060300 Sobic001G156900 Sobic001G156900 Sobic009G122500--Sobic001G156900 Sobic009G122500--Sobic004G122900 Sobic010G223400 Sobic010G223400 Sobic009G122500--Sobic010G223400 Sobic001G308400 Sobic001G308400 Sobic009G122500--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic009G122500--Sobic003G394200 Sobic001G389200 Sobic001G389200 Sobic009G122500--Sobic001G389200 Sobic001G118000 Sobic001G118000 Sobic009G122500--Sobic001G118000 Sobic003G021600--Sobic009G194000 Sobic003G181700 Sobic003G181700 Sobic003G021600--Sobic003G181700 Sobic003G021600--Sobic003G190200 Sobic002G227500 Sobic002G227500 Sobic003G021600--Sobic002G227500 Sobic009G040325 Sobic009G040325 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G021600--Sobic003G394500 Sobic003G021600--Sobic001G308400 Sobic001G043200 Sobic001G043200 Sobic003G021600--Sobic001G043200 Sobic002G117600--Sobic008G097900 Sobic002G117600--Sobic003G190200 SobicK043400 SobicK043400 Sobic002G117600--SobicK043400 Sobic002G117600--Sobic004G077300 Sobic002G117600--Sobic001G501900 Sobic001G378800 Sobic001G378800 Sobic002G117600--Sobic001G378800 Sobic010G171000 Sobic010G171000 Sobic002G117600--Sobic010G171000 Sobic002G117600--Sobic007G172700 Sobic002G117600--Sobic001G411900 Sobic009G194000--Sobic003G181700 Sobic009G194000--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G194000--Sobic001G490900 Sobic010G169900 Sobic010G169900 Sobic009G194000--Sobic010G169900 Sobic009G194000--Sobic004G122900 Sobic009G194000--Sobic001G308400 Sobic009G194000--Sobic003G190200 Sobic009G194000--Sobic006G060000 Sobic001G141400 Sobic001G141400 Sobic009G194000--Sobic001G141400 Sobic004G122900--Sobic003G181700 Sobic004G122900--Sobic009G122500 Sobic004G122900--Sobic009G194000 Sobic004G122900--Sobic001G156900 Sobic004G122900--Sobic001G043200 Sobic004G122900--Sobic001G335000 Sobic004G122900--Sobic001G308400 Sobic004G122900--Sobic003G021600 Sobic004G122900--Sobic002G227500 Sobic003G117800 Sobic003G117800 Sobic003G394500--Sobic003G117800 Sobic003G394500--Sobic001G385000 Sobic003G394500--Sobic004G350700 Sobic003G394500--Sobic001G378800 Sobic007G118500 Sobic007G118500 Sobic003G394500--Sobic007G118500 Sobic003G394500--Sobic003G190200 Sobic006G232800 Sobic006G232800 Sobic003G394500--Sobic006G232800 Sobic003G394500--Sobic007G030100 Sobic003G394500--Sobic001G424800
Octagon: transcription factors


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